RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 HIST1H2BMQ99879 126 aa3.48□□□□□ -1.85
PDPN-205ENST00000487038 CCKP06307 115 aa3.47□□□□□ -1.85
PDPN-205ENST00000487038 MT1BP07438 61 aa3.47□□□□□ -1.85
PDPN-205ENST00000487038 SPRR2EP22531 72 aa3.46□□□□□ -1.86
PDPN-205ENST00000487038 SPRR2BP35325 72 aa3.46□□□□□ -1.86
PDPN-205ENST00000487038 SPRR2AP35326 72 aa3.46□□□□□ -1.86
PDPN-205ENST00000487038 A0A1B0GV72 72 aa3.45□□□□□ -1.86
PDPN-205ENST00000487038 HSBP1L1C9JCN9 74 aa3.45□□□□□ -1.86
PDPN-205ENST00000487038 J3KT08 172 aa3.45□□□□□ -1.86
PDPN-205ENST00000487038 NDUFB1O75438 58 aa3.45□□□□□ -1.86
PDPN-205ENST00000487038 SMCPP49901 116 aaPredicted RBP3.45□□□□□ -1.86
PDPN-205ENST00000487038 HIST1H4GQ99525 98 aa3.45□□□□□ -1.86
PDPN-205ENST00000487038 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
PDPN-205ENST00000487038 KRTAP2-1Q9BYU5 128 aa3.45□□□□□ -1.86
PDPN-205ENST00000487038 IMUPQ9GZP8 106 aa3.45□□□□□ -1.86
PDPN-205ENST00000487038 IGKV3D-7A0A0C4DH55 119 aa3.44□□□□□ -1.86
PDPN-205ENST00000487038 H3BQ85 93 aa3.44□□□□□ -1.86
PDPN-205ENST00000487038 DNAL4O96015 105 aa3.44□□□□□ -1.86
PDPN-205ENST00000487038 KRTAP19-8Q3LI54 63 aa3.44□□□□□ -1.86
PDPN-205ENST00000487038 SPRR2FQ96RM1 72 aa3.43□□□□□ -1.86
PDPN-205ENST00000487038 C21orf62-AS1Q17RA5 79 aa3.42□□□□□ -1.86
PDPN-205ENST00000487038 VPS25Q9BRG1 176 aa3.42□□□□□ -1.86
PDPN-205ENST00000487038 SPRR2GQ9BYE4 73 aa3.42□□□□□ -1.86
PDPN-205ENST00000487038 ORMDL1Q9P0S3 153 aa3.42□□□□□ -1.86
PDPN-205ENST00000487038 A0A0B4J2C4 111 aa3.41□□□□□ -1.86
PDPN-205ENST00000487038 TMEM256-PLSCR3K7ERE1 68 aa3.41□□□□□ -1.86
PDPN-205ENST00000487038 COA6Q5JTJ3 125 aaKnown RBP3.4□□□□□ -1.87
PDPN-205ENST00000487038 C8orf17Q9NRJ1 99 aa3.39□□□□□ -1.87
PDPN-205ENST00000487038 TMEM238LA0A1B0GVL6 79 aa3.38□□□□□ -1.87
PDPN-205ENST00000487038 C2orf91Q6ZV80 131 aa3.38□□□□□ -1.87
PDPN-205ENST00000487038 Q6ZVQ6 151 aa3.38□□□□□ -1.87
PDPN-205ENST00000487038 C5orf47Q569G3 176 aa3.37□□□□□ -1.87
PDPN-205ENST00000487038 C7orf65Q6ZTY9 151 aa3.37□□□□□ -1.87
PDPN-205ENST00000487038 UBE2V1Q13404 147 aa3.36□□□□□ -1.87
PDPN-205ENST00000487038 IGKV2D-30A0A075B6S6 120 aa3.35□□□□□ -1.87
PDPN-205ENST00000487038 IGKV2-30P06310 120 aa3.35□□□□□ -1.87
PDPN-205ENST00000487038 SPRR2DP22532 72 aa3.35□□□□□ -1.87
PDPN-205ENST00000487038 RBM3P98179 157 aaKnown RBP3.35□□□□□ -1.87
PDPN-205ENST00000487038 PRO1854Q9UHT4 67 aa3.35□□□□□ -1.87
PDPN-205ENST00000487038 TRIAP1O43715 76 aa3.34□□□□□ -1.87
PDPN-205ENST00000487038 NDUFS5O43920 106 aa3.34□□□□□ -1.87
PDPN-205ENST00000487038 KLKP1Q107X0 134 aa3.34□□□□□ -1.87
PDPN-205ENST00000487038 TMEM254Q8TBM7 123 aa3.34□□□□□ -1.87
PDPN-205ENST00000487038 MRPL34Q9BQ48 92 aaKnown RBP3.34□□□□□ -1.87
PDPN-205ENST00000487038 COX8AP10176 69 aa3.33□□□□□ -1.88
PDPN-205ENST00000487038 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
PDPN-205ENST00000487038 CSAG1Q6PB30 78 aa3.33□□□□□ -1.88
PDPN-205ENST00000487038 Q6ZQT0 140 aa3.33□□□□□ -1.88
PDPN-205ENST00000487038 S4R3F8 94 aa3.33□□□□□ -1.88
PDPN-205ENST00000487038 C9JAW5 83 aa3.32□□□□□ -1.88
PDPN-205ENST00000487038 DLEU1O43261 78 aa3.32□□□□□ -1.88
PDPN-205ENST00000487038 COX6CP09669 75 aa3.32□□□□□ -1.88
PDPN-205ENST00000487038 S100A2P29034 98 aa3.32□□□□□ -1.88
PDPN-205ENST00000487038 PSMB2P49721 201 aa3.32□□□□□ -1.88
PDPN-205ENST00000487038 KRTAP8-1Q8IUC2 63 aa3.32□□□□□ -1.88
PDPN-205ENST00000487038 PRR15Q8IV56 129 aa3.32□□□□□ -1.88
PDPN-205ENST00000487038 C4orf26Q17RF5 130 aa3.31□□□□□ -1.88
PDPN-205ENST00000487038 PRO2289Q9P1D8 64 aa3.31□□□□□ -1.88
PDPN-205ENST00000487038 HIGD1BQ9P298 99 aa3.31□□□□□ -1.88
PDPN-205ENST00000487038 CRIPTQ9P021 101 aa3.3□□□□□ -1.88
PDPN-205ENST00000487038 MMP24-AS1A0A0U1RRL7 71 aa3.29□□□□□ -1.88
PDPN-205ENST00000487038 A0A1B0GW54 56 aa3.29□□□□□ -1.88
PDPN-205ENST00000487038 hDV103S1A0JD37 113 aa3.29□□□□□ -1.88
PDPN-205ENST00000487038 CEND1Q8N111 149 aa3.29□□□□□ -1.88
PDPN-205ENST00000487038 HIST3H2BBQ8N257 126 aa3.29□□□□□ -1.88
PDPN-205ENST00000487038 LCE3BQ5TA77 95 aa3.28□□□□□ -1.88
PDPN-205ENST00000487038 HIST1H2BLQ99880 126 aa3.28□□□□□ -1.88
PDPN-205ENST00000487038 LCA10Q71F78 164 aa3.27□□□□□ -1.89
PDPN-205ENST00000487038 K7EQZ3 153 aa3.26□□□□□ -1.89
PDPN-205ENST00000487038 DSTQ03001 7570 aaKnown RBP3.26□□□□□ -1.89
PDPN-205ENST00000487038 C14orf144Q96I85 54 aa3.25□□□□□ -1.89
PDPN-205ENST00000487038 FXYD2P54710 66 aa3.24□□□□□ -1.89
PDPN-205ENST00000487038 JMJD7-PLA2G4BH0Y9G9 81 aa3.23□□□□□ -1.89
PDPN-205ENST00000487038 NREPQ16612 68 aa3.23□□□□□ -1.89
PDPN-205ENST00000487038 Q5W150 140 aa3.23□□□□□ -1.89
PDPN-205ENST00000487038 PDE6GP18545 87 aa3.22□□□□□ -1.89
PDPN-205ENST00000487038 SPATA45Q537H7 98 aa3.22□□□□□ -1.89
PDPN-205ENST00000487038 C1orf64Q8NEQ6 169 aa3.22□□□□□ -1.89
PDPN-205ENST00000487038 PAM16Q9Y3D7 125 aa3.22□□□□□ -1.89
PDPN-205ENST00000487038 LOC110117498A0A087WWA1 95 aa3.21□□□□□ -1.9
PDPN-205ENST00000487038 KRTAP12-2P59991 146 aa3.21□□□□□ -1.9
PDPN-205ENST00000487038 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
PDPN-205ENST00000487038 HCG22E2RYF7 251 aa3.2□□□□□ -1.9
PDPN-205ENST00000487038 K7ERJ3 54 aa3.2□□□□□ -1.9
PDPN-205ENST00000487038 S100A6P06703 90 aa3.2□□□□□ -1.9
PDPN-205ENST00000487038 BAALC-AS2P0C853 105 aa3.2□□□□□ -1.9
PDPN-205ENST00000487038 SCGB1C2P0DMR2 95 aa3.2□□□□□ -1.9
PDPN-205ENST00000487038 CXCL6P80162 114 aa3.2□□□□□ -1.9
PDPN-205ENST00000487038 KRTAP3-1Q9BYR8 98 aa3.2□□□□□ -1.9
PDPN-205ENST00000487038 MT1XP80297 61 aa3.19□□□□□ -1.9
PDPN-205ENST00000487038 VAMP8Q9BV40 100 aa3.19□□□□□ -1.9
PDPN-205ENST00000487038 TMA7Q9Y2S6 64 aaKnown RBP3.19□□□□□ -1.9
PDPN-205ENST00000487038 HSD52Q0P140 79 aa3.18□□□□□ -1.9
PDPN-205ENST00000487038 PLAC4Q8WY50 150 aa3.18□□□□□ -1.9
PDPN-205ENST00000487038 A8MUN3 132 aa3.17□□□□□ -1.9
PDPN-205ENST00000487038 S100A1P23297 94 aa3.17□□□□□ -1.9
PDPN-205ENST00000487038 CASC2Q6XLA1 102 aa3.17□□□□□ -1.9
PDPN-205ENST00000487038 C14orf132Q9NPU4 83 aa3.16□□□□□ -1.9
PDPN-205ENST00000487038 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.9
PDPN-205ENST00000487038 BPY2O14599 106 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms