RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 MUC17Q685J3 4493 aa7.03□□□□□ -1.28
HDAC6-229ENST00000486665 C9orf92A6NGG3 77 aa7.02□□□□□ -1.29
HDAC6-229ENST00000486665 DSCR10P59022 87 aa7.02□□□□□ -1.29
HDAC6-229ENST00000486665 TPRXLQ17RH7 258 aa7.02□□□□□ -1.29
HDAC6-229ENST00000486665 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
HDAC6-229ENST00000486665 BPY2O14599 106 aa7.01□□□□□ -1.29
HDAC6-229ENST00000486665 IGKV3D-7A0A0C4DH55 119 aa7□□□□□ -1.29
HDAC6-229ENST00000486665 J3QR89 54 aa7□□□□□ -1.29
HDAC6-229ENST00000486665 NOTCH2NLQ7Z3S9 236 aa7□□□□□ -1.29
HDAC6-229ENST00000486665 IGHV6-1A0A0B4J1U7 121 aa6.99□□□□□ -1.29
HDAC6-229ENST00000486665 A0A1B0GVX0 72 aa6.99□□□□□ -1.29
HDAC6-229ENST00000486665 A8MWP4 228 aa6.99□□□□□ -1.29
HDAC6-229ENST00000486665 K7EQZ3 153 aa6.96□□□□□ -1.3
HDAC6-229ENST00000486665 NDUFB1O75438 58 aa6.96□□□□□ -1.3
HDAC6-229ENST00000486665 PRR15Q8IV56 129 aa6.96□□□□□ -1.3
HDAC6-229ENST00000486665 Q8N9L7 120 aa6.96□□□□□ -1.3
HDAC6-229ENST00000486665 CDIP1Q9H305 208 aa6.96□□□□□ -1.3
HDAC6-229ENST00000486665 LINC00313P59037 77 aa6.95□□□□□ -1.3
HDAC6-229ENST00000486665 XP32Q5T750 250 aa6.95□□□□□ -1.3
HDAC6-229ENST00000486665 A0A0U1RQV1 116 aa6.94□□□□□ -1.3
HDAC6-229ENST00000486665 K7ERU9 68 aa6.94□□□□□ -1.3
HDAC6-229ENST00000486665 KRTAP9-6A0A140TA67 174 aa6.93□□□□□ -1.3
HDAC6-229ENST00000486665 C8orf87E5RJ46 101 aa6.93□□□□□ -1.3
HDAC6-229ENST00000486665 CXCL6P80162 114 aa6.93□□□□□ -1.3
HDAC6-229ENST00000486665 KRTAP16-1A8MUX0 517 aa6.92□□□□□ -1.3
HDAC6-229ENST00000486665 LINC00643Q86TS7 51 aa6.92□□□□□ -1.3
HDAC6-229ENST00000486665 C8orf17Q9NRJ1 99 aa6.92□□□□□ -1.3
HDAC6-229ENST00000486665 MMP24-AS1A0A0U1RRL7 71 aa6.9□□□□□ -1.3
HDAC6-229ENST00000486665 ATP5EP2Q5VTU8 51 aa6.87□□□□□ -1.31
HDAC6-229ENST00000486665 A8MUU9 505 aa6.86□□□□□ -1.31
HDAC6-229ENST00000486665 C20orf166-AS1Q96NR2 134 aa6.86□□□□□ -1.31
HDAC6-229ENST00000486665 RPL37P61927 97 aaKnown RBP6.85□□□□□ -1.31
HDAC6-229ENST00000486665 Q75L30 129 aa6.85□□□□□ -1.31
HDAC6-229ENST00000486665 hDV103S1A0JD37 113 aa6.84□□□□□ -1.31
HDAC6-229ENST00000486665 WFDC13Q8IUB5 93 aa6.84□□□□□ -1.31
HDAC6-229ENST00000486665 TMEM254Q8TBM7 123 aa6.83□□□□□ -1.32
HDAC6-229ENST00000486665 HCG22E2RYF7 251 aa6.82□□□□□ -1.32
HDAC6-229ENST00000486665 HIST1H4AP62805 103 aaKnown RBP6.82□□□□□ -1.32
HDAC6-229ENST00000486665 CASC2Q6XLA1 102 aa6.82□□□□□ -1.32
HDAC6-229ENST00000486665 MRPL34Q9BQ48 92 aaKnown RBP6.82□□□□□ -1.32
HDAC6-229ENST00000486665 Q8N9P0 234 aaPredicted RBP6.81□□□□□ -1.32
HDAC6-229ENST00000486665 A0A087WVE0 104 aa6.8□□□□□ -1.32
HDAC6-229ENST00000486665 MT-ATP8P03928 68 aa6.8□□□□□ -1.32
HDAC6-229ENST00000486665 PCOTHQ58A44 107 aa6.8□□□□□ -1.32
HDAC6-229ENST00000486665 SEC61BP60468 96 aaKnown RBP6.79□□□□□ -1.32
HDAC6-229ENST00000486665 KRTAP4-1Q9BYQ7 146 aa6.77□□□□□ -1.33
HDAC6-229ENST00000486665 ATP11AUNQ6ZP68 121 aa6.76□□□□□ -1.33
HDAC6-229ENST00000486665 NDUFS5O43920 106 aa6.75□□□□□ -1.33
HDAC6-229ENST00000486665 ZCCHC13Q8WW36 166 aaKnown RBP6.72□□□□□ -1.33
HDAC6-229ENST00000486665 IMUPQ9GZP8 106 aa6.71□□□□□ -1.34
HDAC6-229ENST00000486665 Q5W150 140 aa6.7□□□□□ -1.34
HDAC6-229ENST00000486665 LCE2DQ5TA82 110 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-229ENST00000486665 TP53AIP1Q9HCN2 124 aa6.64□□□□□ -1.35
HDAC6-229ENST00000486665 CRCT1Q9UGL9 99 aa6.64□□□□□ -1.35
HDAC6-229ENST00000486665 FSIP2Q5CZC0 6907 aa6.63□□□□□ -1.35
HDAC6-229ENST00000486665 LCE2CQ5TA81 110 aa6.63□□□□□ -1.35
HDAC6-229ENST00000486665 FAM236AA0A1B0GUQ0 79 aa6.61□□□□□ -1.35
HDAC6-229ENST00000486665 FAM236BA0A1B0GV22 79 aa6.61□□□□□ -1.35
HDAC6-229ENST00000486665 OCR1Q9BZK8 76 aa6.61□□□□□ -1.35
HDAC6-229ENST00000486665 SCGB1A1P11684 91 aa6.6□□□□□ -1.35
HDAC6-229ENST00000486665 UQCRQO14949 82 aa6.59□□□□□ -1.35
HDAC6-229ENST00000486665 SPINK7P58062 85 aa6.59□□□□□ -1.35
HDAC6-229ENST00000486665 KRTAP19-2Q3LHN2 52 aa6.59□□□□□ -1.35
HDAC6-229ENST00000486665 IGKV2D-30A0A075B6S6 120 aa6.55□□□□□ -1.36
HDAC6-229ENST00000486665 IGKV2-30P06310 120 aa6.55□□□□□ -1.36
HDAC6-229ENST00000486665 TRAV22A0A0B4J277 110 aa6.54□□□□□ -1.36
HDAC6-229ENST00000486665 H0Y9P7 68 aa6.54□□□□□ -1.36
HDAC6-229ENST00000486665 HRES1P13985 223 aa6.54□□□□□ -1.36
HDAC6-229ENST00000486665 MT1HP80294 61 aa6.53□□□□□ -1.36
HDAC6-229ENST00000486665 C7orf65Q6ZTY9 151 aa6.51□□□□□ -1.37
HDAC6-229ENST00000486665 TRAV7A0A075B6U4 112 aa6.5□□□□□ -1.37
HDAC6-229ENST00000486665 ATOX1O00244 68 aa6.5□□□□□ -1.37
HDAC6-229ENST00000486665 C5orf47Q569G3 176 aa6.5□□□□□ -1.37
HDAC6-229ENST00000486665 SMIM20Q8N5G0 67 aa6.49□□□□□ -1.37
HDAC6-229ENST00000486665 MPLKIPQ8TAP9 179 aa6.49□□□□□ -1.37
HDAC6-229ENST00000486665 CYP4F30PQ9H0H9 118 aa6.48□□□□□ -1.37
HDAC6-229ENST00000486665 FLGP20930 4061 aaPredicted RBP6.47□□□□□ -1.37
HDAC6-229ENST00000486665 LOC101927531A0A1B0GV80 90 aa6.47□□□□□ -1.37
HDAC6-229ENST00000486665 MP68P56378 58 aa6.47□□□□□ -1.37
HDAC6-229ENST00000486665 C1orf64Q8NEQ6 169 aa6.47□□□□□ -1.37
HDAC6-229ENST00000486665 LINC00208Q96KT6 92 aa6.47□□□□□ -1.37
HDAC6-229ENST00000486665 LORP23490 312 aaPredicted RBP6.45□□□□□ -1.38
HDAC6-229ENST00000486665 KRTAP10-6P60371 365 aaPredicted RBP6.43□□□□□ -1.38
HDAC6-229ENST00000486665 SERP2Q8N6R1 65 aa6.43□□□□□ -1.38
HDAC6-229ENST00000486665 RBM12B-AS1Q9P1G2 102 aa6.43□□□□□ -1.38
HDAC6-229ENST00000486665 H3BPC8 53 aa6.42□□□□□ -1.38
HDAC6-229ENST00000486665 KLKP1Q107X0 134 aa6.41□□□□□ -1.38
HDAC6-229ENST00000486665 C4orf26Q17RF5 130 aa6.41□□□□□ -1.38
HDAC6-229ENST00000486665 COX6B2Q6YFQ2 88 aa6.4□□□□□ -1.38
HDAC6-229ENST00000486665 FAM236DA0A1B0GTK5 79 aa6.39□□□□□ -1.39
HDAC6-229ENST00000486665 FAM236CP0DP71 79 aa6.39□□□□□ -1.39
HDAC6-229ENST00000486665 KRTAP3-1Q9BYR8 98 aa6.36□□□□□ -1.39
HDAC6-229ENST00000486665 SNURFQ9Y675 71 aa6.36□□□□□ -1.39
HDAC6-229ENST00000486665 COX7CP15954 63 aa6.35□□□□□ -1.39
HDAC6-229ENST00000486665 C20orf197Q8N268 126 aa6.35□□□□□ -1.39
HDAC6-229ENST00000486665 ANAPC13Q9BS18 74 aa6.33□□□□□ -1.4
HDAC6-229ENST00000486665 H1FX-AS1Q4G0G2 97 aa6.31□□□□□ -1.4
HDAC6-229ENST00000486665 M0R2T5 61 aa6.3□□□□□ -1.4
HDAC6-229ENST00000486665 CCDC179H3BU77 68 aa6.24□□□□□ -1.41
HDAC6-229ENST00000486665 CYSTM1Q9H1C7 97 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms