RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 Q5XG85 94 aa5.63□□□□□ -1.51
COL12A1-208ENST00000486533 Q8N9L7 120 aa5.63□□□□□ -1.51
COL12A1-208ENST00000486533 CIRBP-AS1Q8TBR5 109 aa5.63□□□□□ -1.51
COL12A1-208ENST00000486533 LINC00474Q9P2X8 69 aa5.63□□□□□ -1.51
COL12A1-208ENST00000486533 HCG22E2RYF7 251 aa5.62□□□□□ -1.51
COL12A1-208ENST00000486533 SMIM29Q86T20 159 aa5.62□□□□□ -1.51
COL12A1-208ENST00000486533 ST20-AS1Q8NBB2 130 aa5.62□□□□□ -1.51
COL12A1-208ENST00000486533 UBE2AP49459 152 aa5.61□□□□□ -1.51
COL12A1-208ENST00000486533 MP68P56378 58 aa5.6□□□□□ -1.51
COL12A1-208ENST00000486533 H3BPC8 53 aa5.59□□□□□ -1.51
COL12A1-208ENST00000486533 SPRR1BP22528 89 aa5.59□□□□□ -1.51
COL12A1-208ENST00000486533 HRCT1Q6UXD1 115 aa5.59□□□□□ -1.51
COL12A1-208ENST00000486533 A0A096LNI7 61 aa5.59□□□□□ -1.52
COL12A1-208ENST00000486533 DSCR10P59022 87 aa5.59□□□□□ -1.52
COL12A1-208ENST00000486533 C4orf26Q17RF5 130 aa5.59□□□□□ -1.52
COL12A1-208ENST00000486533 IGFL1Q6UW32 110 aa5.59□□□□□ -1.52
COL12A1-208ENST00000486533 C9orf163Q8N9P6 203 aa5.59□□□□□ -1.52
COL12A1-208ENST00000486533 KRTAP7-1Q8IUC3 87 aa5.58□□□□□ -1.52
COL12A1-208ENST00000486533 IGKV2-24A0A0C4DH68 120 aa5.57□□□□□ -1.52
COL12A1-208ENST00000486533 K7EQZ3 153 aa5.57□□□□□ -1.52
COL12A1-208ENST00000486533 HIGD2AQ9BW72 106 aa5.57□□□□□ -1.52
COL12A1-208ENST00000486533 KRTAP29-1A8MX34 341 aaPredicted RBP5.56□□□□□ -1.52
COL12A1-208ENST00000486533 KRTAP10-4P60372 401 aaPredicted RBP5.56□□□□□ -1.52
COL12A1-208ENST00000486533 RPL37AP61513 92 aaKnown RBP5.56□□□□□ -1.52
COL12A1-208ENST00000486533 LRP1Q07954 4544 aaKnown RBP5.56□□□□□ -1.52
COL12A1-208ENST00000486533 PANO1I0J062 215 aa5.55□□□□□ -1.52
COL12A1-208ENST00000486533 A0A087WSZ3 146 aa5.55□□□□□ -1.52
COL12A1-208ENST00000486533 PRLHP81277 87 aa5.55□□□□□ -1.52
COL12A1-208ENST00000486533 PRO0628Q9UI54 55 aa5.55□□□□□ -1.52
COL12A1-208ENST00000486533 hDV103S1A0JD37 113 aa5.54□□□□□ -1.52
COL12A1-208ENST00000486533 ZCCHC13Q8WW36 166 aaKnown RBP5.54□□□□□ -1.52
COL12A1-208ENST00000486533 CHTF8P0CG12 524 aa5.53□□□□□ -1.52
COL12A1-208ENST00000486533 CYP4F30PQ9H0H9 118 aa5.53□□□□□ -1.52
COL12A1-208ENST00000486533 ZNF706Q9Y5V0 76 aaPredicted RBP5.53□□□□□ -1.52
COL12A1-208ENST00000486533 V9GYY9 64 aa5.53□□□□□ -1.52
COL12A1-208ENST00000486533 A0A1W2PNN7 141 aa5.52□□□□□ -1.53
COL12A1-208ENST00000486533 A8MWP4 228 aa5.52□□□□□ -1.53
COL12A1-208ENST00000486533 FP248Q71RG6 208 aaPredicted RBP5.51□□□□□ -1.53
COL12A1-208ENST00000486533 SPACA4Q8TDM5 124 aa5.51□□□□□ -1.53
COL12A1-208ENST00000486533 CASC2Q6XLA1 102 aa5.5□□□□□ -1.53
COL12A1-208ENST00000486533 PRR15Q8IV56 129 aa5.5□□□□□ -1.53
COL12A1-208ENST00000486533 WFDC13Q8IUB5 93 aa5.5□□□□□ -1.53
COL12A1-208ENST00000486533 SPANXA2-OT1Q8N9U9 137 aa5.5□□□□□ -1.53
COL12A1-208ENST00000486533 PHF5AQ7RTV0 110 aaKnown RBP5.49□□□□□ -1.53
COL12A1-208ENST00000486533 KRTAP3-1Q9BYR8 98 aa5.49□□□□□ -1.53
COL12A1-208ENST00000486533 FAT3Q8TDW7 4589 aa5.49□□□□□ -1.53
COL12A1-208ENST00000486533 TRAV22A0A0B4J277 110 aa5.48□□□□□ -1.53
COL12A1-208ENST00000486533 TP53AIP1Q9HCN2 124 aa5.48□□□□□ -1.53
COL12A1-208ENST00000486533 PLAC8Q9NZF1 115 aa5.48□□□□□ -1.53
COL12A1-208ENST00000486533 H0Y9P7 68 aa5.47□□□□□ -1.53
COL12A1-208ENST00000486533 MOBPQ13875 183 aa5.47□□□□□ -1.53
COL12A1-208ENST00000486533 Q1T7F1 81 aa5.46□□□□□ -1.53
COL12A1-208ENST00000486533 LINC00472Q9H8W2 130 aa5.46□□□□□ -1.53
COL12A1-208ENST00000486533 C1orf64Q8NEQ6 169 aa5.45□□□□□ -1.54
COL12A1-208ENST00000486533 MPLKIPQ8TAP9 179 aa5.45□□□□□ -1.54
COL12A1-208ENST00000486533 LINC00208Q96KT6 92 aa5.45□□□□□ -1.54
COL12A1-208ENST00000486533 HMCN2Q8NDA2 5059 aa5.44□□□□□ -1.54
COL12A1-208ENST00000486533 LINC00483Q53H64 154 aa5.43□□□□□ -1.54
COL12A1-208ENST00000486533 C1orf195Q5TG92 126 aa5.43□□□□□ -1.54
COL12A1-208ENST00000486533 KRTAP13-1Q8IUC0 172 aa5.43□□□□□ -1.54
COL12A1-208ENST00000486533 BRK1Q8WUW1 75 aa5.43□□□□□ -1.54
COL12A1-208ENST00000486533 DEFB116Q30KQ4 102 aa5.42□□□□□ -1.54
COL12A1-208ENST00000486533 FAM229BQ4G0N7 80 aa5.42□□□□□ -1.54
COL12A1-208ENST00000486533 PKHD1L1Q86WI1 4243 aa5.42□□□□□ -1.54
COL12A1-208ENST00000486533 MT1HL1P0DM35 61 aa5.41□□□□□ -1.54
COL12A1-208ENST00000486533 MMP24-AS1A0A0U1RRL7 71 aa5.4□□□□□ -1.55
COL12A1-208ENST00000486533 A0A0G2JQZ4 141 aa5.39□□□□□ -1.55
COL12A1-208ENST00000486533 LIMD2Q9BT23 127 aa5.39□□□□□ -1.55
COL12A1-208ENST00000486533 UBR4Q5T4S7 5183 aa5.38□□□□□ -1.55
COL12A1-208ENST00000486533 IGLV9-49A0A0B4J1Y8 123 aa5.38□□□□□ -1.55
COL12A1-208ENST00000486533 KRTAP11-1Q8IUC1 163 aa5.38□□□□□ -1.55
COL12A1-208ENST00000486533 C8orf17Q9NRJ1 99 aa5.38□□□□□ -1.55
COL12A1-208ENST00000486533 A0A1B0GVX0 72 aa5.37□□□□□ -1.55
COL12A1-208ENST00000486533 SPINK6Q6UWN8 80 aa5.37□□□□□ -1.55
COL12A1-208ENST00000486533 ASB16-AS1Q495Z4 193 aa5.36□□□□□ -1.55
COL12A1-208ENST00000486533 KRTAP5-3Q6L8H2 238 aa5.36□□□□□ -1.55
COL12A1-208ENST00000486533 IGLV7-46A0A075B6I9 117 aa5.35□□□□□ -1.55
COL12A1-208ENST00000486533 ZNF861PO60384 105 aa5.35□□□□□ -1.55
COL12A1-208ENST00000486533 CD164Q04900 197 aa5.35□□□□□ -1.55
COL12A1-208ENST00000486533 PRR4Q16378 134 aa5.34□□□□□ -1.55
COL12A1-208ENST00000486533 MRPL34Q9BQ48 92 aaKnown RBP5.34□□□□□ -1.55
COL12A1-208ENST00000486533 PSORS1C2Q9UIG4 136 aa5.34□□□□□ -1.55
COL12A1-208ENST00000486533 Q96NJ1 140 aa5.33□□□□□ -1.56
COL12A1-208ENST00000486533 C8orf87E5RJ46 101 aa5.33□□□□□ -1.56
COL12A1-208ENST00000486533 NDUFS5O43920 106 aa5.33□□□□□ -1.56
COL12A1-208ENST00000486533 TNXBP22105 4242 aa5.32□□□□□ -1.56
COL12A1-208ENST00000486533 LOC101927531A0A1B0GV80 90 aa5.32□□□□□ -1.56
COL12A1-208ENST00000486533 LRP2P98164 4655 aa5.32□□□□□ -1.56
COL12A1-208ENST00000486533 IGHV6-1A0A0B4J1U7 121 aa5.31□□□□□ -1.56
COL12A1-208ENST00000486533 SSBP3-AS1Q7Z2R9 100 aa5.3□□□□□ -1.56
COL12A1-208ENST00000486533 COA5Q86WW8 74 aa5.3□□□□□ -1.56
COL12A1-208ENST00000486533 KRTAP10-8P60410 259 aa5.29□□□□□ -1.56
COL12A1-208ENST00000486533 PSPHP1O15172 72 aa5.29□□□□□ -1.56
COL12A1-208ENST00000486533 IGLV7-43P04211 117 aa5.29□□□□□ -1.56
COL12A1-208ENST00000486533 Q8N9P0 234 aaPredicted RBP5.28□□□□□ -1.56
COL12A1-208ENST00000486533 Q75L30 129 aa5.26□□□□□ -1.57
COL12A1-208ENST00000486533 PRR15LQ9BU68 103 aa5.26□□□□□ -1.57
COL12A1-208ENST00000486533 A8MUN3 132 aa5.25□□□□□ -1.57
COL12A1-208ENST00000486533 CHKB-CPT1BH3BT56 60 aa5.25□□□□□ -1.57
COL12A1-208ENST00000486533 PCOTHQ58A44 107 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms