RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 Q75L30 129 aa11.74□□□□□ -0.53
SREBF1-214ENST00000486311 LOC110117498A0A087WWA1 95 aa11.73□□□□□ -0.53
SREBF1-214ENST00000486311 C14orf132Q9NPU4 83 aa11.73□□□□□ -0.53
SREBF1-214ENST00000486311 Q6Q795 121 aa11.72□□□□□ -0.53
SREBF1-214ENST00000486311 ATP11AUNQ6ZP68 121 aa11.71□□□□□ -0.53
SREBF1-214ENST00000486311 CCKP06307 115 aa11.7□□□□□ -0.54
SREBF1-214ENST00000486311 ETDBQ3ZM63 59 aa11.7□□□□□ -0.54
SREBF1-214ENST00000486311 Q6ZQT0 140 aa11.68□□□□□ -0.54
SREBF1-214ENST00000486311 VPS25Q9BRG1 176 aa11.68□□□□□ -0.54
SREBF1-214ENST00000486311 A0A1W2PNM2 257 aa11.66□□□□□ -0.54
SREBF1-214ENST00000486311 A0A1B0GW54 56 aa11.65□□□□□ -0.54
SREBF1-214ENST00000486311 SS18L2Q9UHA2 77 aa11.65□□□□□ -0.54
SREBF1-214ENST00000486311 Q96NJ1 140 aa11.63□□□□□ -0.55
SREBF1-214ENST00000486311 A0A087WSZ3 146 aa11.59□□□□□ -0.55
SREBF1-214ENST00000486311 C20orf166-AS1Q96NR2 134 aa11.58□□□□□ -0.56
SREBF1-214ENST00000486311 A8MUU9 505 aa11.55□□□□□ -0.56
SREBF1-214ENST00000486311 J3QR89 54 aa11.48□□□□□ -0.57
SREBF1-214ENST00000486311 ACYP1P07311 99 aa11.46□□□□□ -0.57
SREBF1-214ENST00000486311 DSCR10P59022 87 aa11.45□□□□□ -0.58
SREBF1-214ENST00000486311 NREPQ16612 68 aa11.45□□□□□ -0.58
SREBF1-214ENST00000486311 FAM240AA0A1B0GVK7 77 aa11.43□□□□□ -0.58
SREBF1-214ENST00000486311 UBL5Q9BZL1 73 aa11.43□□□□□ -0.58
SREBF1-214ENST00000486311 SIGMAR1Q99720 223 aa11.41□□□□□ -0.58
SREBF1-214ENST00000486311 J3KT08 172 aa11.39□□□□□ -0.59
SREBF1-214ENST00000486311 LINC00846Q9NV44 126 aa11.39□□□□□ -0.59
SREBF1-214ENST00000486311 KRTAP9-8Q9BYQ0 159 aa11.38□□□□□ -0.59
SREBF1-214ENST00000486311 LINC00472Q9H8W2 130 aa11.38□□□□□ -0.59
SREBF1-214ENST00000486311 LINC00313P59037 77 aa11.36□□□□□ -0.59
SREBF1-214ENST00000486311 Q6ZVQ6 151 aa11.36□□□□□ -0.59
SREBF1-214ENST00000486311 IGKV4-1P06312 121 aa11.35□□□□□ -0.59
SREBF1-214ENST00000486311 KRTAP16-1A8MUX0 517 aa11.34□□□□□ -0.59
SREBF1-214ENST00000486311 K7ERU9 68 aa11.33□□□□□ -0.6
SREBF1-214ENST00000486311 USH2AO75445 5202 aa11.32□□□□□ -0.6
SREBF1-214ENST00000486311 BPY2O14599 106 aa11.31□□□□□ -0.6
SREBF1-214ENST00000486311 DEFB116Q30KQ4 102 aa11.31□□□□□ -0.6
SREBF1-214ENST00000486311 NOTCH2NLQ7Z3S9 236 aa11.29□□□□□ -0.6
SREBF1-214ENST00000486311 SSPOA2VEC9 5147 aa11.28□□□□□ -0.6
SREBF1-214ENST00000486311 NDUFB1O75438 58 aa11.28□□□□□ -0.6
SREBF1-214ENST00000486311 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.25□□□□□ -0.61
SREBF1-214ENST00000486311 A8MWP4 228 aa11.24□□□□□ -0.61
SREBF1-214ENST00000486311 MPLKIPQ8TAP9 179 aa11.24□□□□□ -0.61
SREBF1-214ENST00000486311 FAM236DA0A1B0GTK5 79 aa11.23□□□□□ -0.61
SREBF1-214ENST00000486311 KRTAP9-7A8MTY7 169 aa11.23□□□□□ -0.61
SREBF1-214ENST00000486311 FAM236CP0DP71 79 aa11.23□□□□□ -0.61
SREBF1-214ENST00000486311 HRES1P13985 223 aa11.22□□□□□ -0.61
SREBF1-214ENST00000486311 ATP5EP2Q5VTU8 51 aa11.22□□□□□ -0.61
SREBF1-214ENST00000486311 IGHV6-1A0A0B4J1U7 121 aa11.21□□□□□ -0.61
SREBF1-214ENST00000486311 CXCL6P80162 114 aa11.21□□□□□ -0.61
SREBF1-214ENST00000486311 A0A1B0GVX0 72 aa11.2□□□□□ -0.62
SREBF1-214ENST00000486311 LINC00643Q86TS7 51 aa11.2□□□□□ -0.62
SREBF1-214ENST00000486311 RBM12B-AS1Q9P1G2 102 aa11.2□□□□□ -0.62
SREBF1-214ENST00000486311 MT2AP02795 61 aa11.19□□□□□ -0.62
SREBF1-214ENST00000486311 C8orf87E5RJ46 101 aa11.18□□□□□ -0.62
SREBF1-214ENST00000486311 PRR15Q8IV56 129 aa11.16□□□□□ -0.62
SREBF1-214ENST00000486311 IGKV3D-7A0A0C4DH55 119 aa11.15□□□□□ -0.62
SREBF1-214ENST00000486311 K7EQZ3 153 aa11.13□□□□□ -0.63
SREBF1-214ENST00000486311 MT1FP04733 61 aa11.1□□□□□ -0.63
SREBF1-214ENST00000486311 C8orf17Q9NRJ1 99 aa11.08□□□□□ -0.64
SREBF1-214ENST00000486311 Q8N9L7 120 aa11.07□□□□□ -0.64
SREBF1-214ENST00000486311 ZCCHC13Q8WW36 166 aaKnown RBP11.04□□□□□ -0.64
SREBF1-214ENST00000486311 KRTAP9-3Q9BYQ3 159 aa11.03□□□□□ -0.64
SREBF1-214ENST00000486311 FCGBPQ9Y6R7 5405 aaPredicted RBP11.02□□□□□ -0.65
SREBF1-214ENST00000486311 LCE2BO14633 110 aa11.02□□□□□ -0.65
SREBF1-214ENST00000486311 KRTAP10-10P60014 251 aa11.02□□□□□ -0.65
SREBF1-214ENST00000486311 HIST1H4AP62805 103 aaKnown RBP11.02□□□□□ -0.65
SREBF1-214ENST00000486311 MMP24-AS1A0A0U1RRL7 71 aa11.01□□□□□ -0.65
SREBF1-214ENST00000486311 hDV103S1A0JD37 113 aa10.99□□□□□ -0.65
SREBF1-214ENST00000486311 HCG22E2RYF7 251 aa10.99□□□□□ -0.65
SREBF1-214ENST00000486311 SPINK7P58062 85 aa10.99□□□□□ -0.65
SREBF1-214ENST00000486311 TMEM254Q8TBM7 123 aa10.99□□□□□ -0.65
SREBF1-214ENST00000486311 CASC2Q6XLA1 102 aa10.97□□□□□ -0.65
SREBF1-214ENST00000486311 Q8N9P0 234 aaPredicted RBP10.97□□□□□ -0.65
SREBF1-214ENST00000486311 WFDC13Q8IUB5 93 aa10.95□□□□□ -0.66
SREBF1-214ENST00000486311 MRPL34Q9BQ48 92 aaKnown RBP10.95□□□□□ -0.66
SREBF1-214ENST00000486311 KRTAP19-1Q8IUB9 90 aa10.94□□□□□ -0.66
SREBF1-214ENST00000486311 IMUPQ9GZP8 106 aa10.94□□□□□ -0.66
SREBF1-214ENST00000486311 MT-ATP8P03928 68 aa10.9□□□□□ -0.66
SREBF1-214ENST00000486311 NDUFS5O43920 106 aa10.87□□□□□ -0.67
SREBF1-214ENST00000486311 A0A087WVE0 104 aa10.85□□□□□ -0.67
SREBF1-214ENST00000486311 MACF1Q9UPN3 7388 aaKnown RBP10.79□□□□□ -0.68
SREBF1-214ENST00000486311 TP53AIP1Q9HCN2 124 aa10.79□□□□□ -0.68
SREBF1-214ENST00000486311 SYNE2Q8WXH0 6885 aaKnown RBP10.75□□□□□ -0.69
SREBF1-214ENST00000486311 SCGB1A1P11684 91 aa10.74□□□□□ -0.69
SREBF1-214ENST00000486311 FAM236AA0A1B0GUQ0 79 aa10.69□□□□□ -0.7
SREBF1-214ENST00000486311 FAM236BA0A1B0GV22 79 aa10.69□□□□□ -0.7
SREBF1-214ENST00000486311 KRTAP19-6Q3LI70 58 aa10.69□□□□□ -0.7
SREBF1-214ENST00000486311 UQCRQO14949 82 aa10.67□□□□□ -0.7
SREBF1-214ENST00000486311 H1FX-AS1Q4G0G2 97 aa10.63□□□□□ -0.71
SREBF1-214ENST00000486311 SMIM20Q8N5G0 67 aa10.63□□□□□ -0.71
SREBF1-214ENST00000486311 ATOX1O00244 68 aa10.6□□□□□ -0.71
SREBF1-214ENST00000486311 OCR1Q9BZK8 76 aa10.6□□□□□ -0.71
SREBF1-214ENST00000486311 TRAV22A0A0B4J277 110 aa10.59□□□□□ -0.71
SREBF1-214ENST00000486311 Q5W150 140 aa10.59□□□□□ -0.71
SREBF1-214ENST00000486311 H0Y9P7 68 aa10.53□□□□□ -0.72
SREBF1-214ENST00000486311 MP68P56378 58 aa10.53□□□□□ -0.72
SREBF1-214ENST00000486311 C5orf47Q569G3 176 aa10.53□□□□□ -0.72
SREBF1-214ENST00000486311 TRAV7A0A075B6U4 112 aa10.52□□□□□ -0.73
SREBF1-214ENST00000486311 IGKV2D-30A0A075B6S6 120 aa10.51□□□□□ -0.73
SREBF1-214ENST00000486311 IGKV2-30P06310 120 aa10.51□□□□□ -0.73
SREBF1-214ENST00000486311 C7orf65Q6ZTY9 151 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms