RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 KRTAP13-3Q3SY46 172 aa5.52□□□□□ -1.53
SND1-213ENST00000486037 Q6JHZ5 121 aa5.52□□□□□ -1.53
SND1-213ENST00000486037 Q8NBF4 154 aa5.52□□□□□ -1.53
SND1-213ENST00000486037 FAM240AA0A1B0GVK7 77 aa5.51□□□□□ -1.53
SND1-213ENST00000486037 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
SND1-213ENST00000486037 ACYP1P07311 99 aa5.49□□□□□ -1.53
SND1-213ENST00000486037 SSBP3-AS1Q7Z2R9 100 aa5.49□□□□□ -1.53
SND1-213ENST00000486037 LINC00846Q9NV44 126 aa5.49□□□□□ -1.53
SND1-213ENST00000486037 SEC61BP60468 96 aaKnown RBP5.48□□□□□ -1.53
SND1-213ENST00000486037 Q6Q795 121 aa5.47□□□□□ -1.53
SND1-213ENST00000486037 HRCT1Q6UXD1 115 aa5.46□□□□□ -1.54
SND1-213ENST00000486037 TRBV7-7A0A0K0K1E9 115 aa5.45□□□□□ -1.54
SND1-213ENST00000486037 A0A1B0GW54 56 aa5.45□□□□□ -1.54
SND1-213ENST00000486037 A0A087WSZ3 146 aa5.44□□□□□ -1.54
SND1-213ENST00000486037 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
SND1-213ENST00000486037 Q6ZVQ6 151 aa5.44□□□□□ -1.54
SND1-213ENST00000486037 CD164Q04900 197 aa5.43□□□□□ -1.54
SND1-213ENST00000486037 FP248Q71RG6 208 aaPredicted RBP5.42□□□□□ -1.54
SND1-213ENST00000486037 UBL5Q9BZL1 73 aa5.41□□□□□ -1.54
SND1-213ENST00000486037 NREPQ16612 68 aa5.4□□□□□ -1.54
SND1-213ENST00000486037 LINC00643Q86TS7 51 aa5.4□□□□□ -1.54
SND1-213ENST00000486037 M0R2T5 61 aa5.39□□□□□ -1.55
SND1-213ENST00000486037 IGKV3D-7A0A0C4DH55 119 aa5.38□□□□□ -1.55
SND1-213ENST00000486037 MT-ATP8P03928 68 aa5.38□□□□□ -1.55
SND1-213ENST00000486037 XP32Q5T750 250 aa5.38□□□□□ -1.55
SND1-213ENST00000486037 Q96NJ1 140 aa5.38□□□□□ -1.55
SND1-213ENST00000486037 LINC00472Q9H8W2 130 aa5.38□□□□□ -1.55
SND1-213ENST00000486037 DEFB116Q30KQ4 102 aa5.37□□□□□ -1.55
SND1-213ENST00000486037 SPAG11AQ6PDA7 123 aa5.37□□□□□ -1.55
SND1-213ENST00000486037 SS18L2Q9UHA2 77 aa5.37□□□□□ -1.55
SND1-213ENST00000486037 SPINK1P00995 79 aa5.36□□□□□ -1.55
SND1-213ENST00000486037 Q5XG85 94 aa5.36□□□□□ -1.55
SND1-213ENST00000486037 BPY2O14599 106 aa5.35□□□□□ -1.55
SND1-213ENST00000486037 KRTAP19-1Q8IUB9 90 aa5.35□□□□□ -1.55
SND1-213ENST00000486037 DSCR10P59022 87 aa5.34□□□□□ -1.55
SND1-213ENST00000486037 CXCL6P80162 114 aa5.34□□□□□ -1.55
SND1-213ENST00000486037 ATP5EP2Q5VTU8 51 aa5.34□□□□□ -1.55
SND1-213ENST00000486037 SIGMAR1Q99720 223 aa5.34□□□□□ -1.55
SND1-213ENST00000486037 LIMD2Q9BT23 127 aa5.34□□□□□ -1.55
SND1-213ENST00000486037 RPS29P62273 56 aaKnown RBP5.33□□□□□ -1.56
SND1-213ENST00000486037 PCOTHQ58A44 107 aa5.33□□□□□ -1.56
SND1-213ENST00000486037 C1orf195Q5TG92 126 aa5.32□□□□□ -1.56
SND1-213ENST00000486037 Q8N9L7 120 aa5.32□□□□□ -1.56
SND1-213ENST00000486037 IGKV4-1P06312 121 aa5.31□□□□□ -1.56
SND1-213ENST00000486037 J3KT08 172 aa5.3□□□□□ -1.56
SND1-213ENST00000486037 K7EQZ3 153 aa5.3□□□□□ -1.56
SND1-213ENST00000486037 A0A087WVE0 104 aa5.29□□□□□ -1.56
SND1-213ENST00000486037 A0A0A0MQY5 61 aa5.29□□□□□ -1.56
SND1-213ENST00000486037 A8MWP4 228 aa5.29□□□□□ -1.56
SND1-213ENST00000486037 HIST1H4AP62805 103 aaKnown RBP5.28□□□□□ -1.56
SND1-213ENST00000486037 IMUPQ9GZP8 106 aa5.28□□□□□ -1.56
SND1-213ENST00000486037 NEBP20929 6669 aa5.27□□□□□ -1.57
SND1-213ENST00000486037 PRR15Q8IV56 129 aa5.26□□□□□ -1.57
SND1-213ENST00000486037 A0A1B0GVX0 72 aa5.25□□□□□ -1.57
SND1-213ENST00000486037 NDUFB1O75438 58 aa5.24□□□□□ -1.57
SND1-213ENST00000486037 NOTCH2NLQ7Z3S9 236 aa5.24□□□□□ -1.57
SND1-213ENST00000486037 KRTAP9-8Q9BYQ0 159 aa5.24□□□□□ -1.57
SND1-213ENST00000486037 MUC12Q9UKN1 5478 aa5.23□□□□□ -1.57
SND1-213ENST00000486037 IGHV6-1A0A0B4J1U7 121 aa5.23□□□□□ -1.57
SND1-213ENST00000486037 MMP24-AS1A0A0U1RRL7 71 aa5.23□□□□□ -1.57
SND1-213ENST00000486037 COX6B2Q6YFQ2 88 aa5.23□□□□□ -1.57
SND1-213ENST00000486037 C8orf17Q9NRJ1 99 aa5.22□□□□□ -1.57
SND1-213ENST00000486037 FAM236AA0A1B0GUQ0 79 aa5.21□□□□□ -1.58
SND1-213ENST00000486037 FAM236BA0A1B0GV22 79 aa5.21□□□□□ -1.58
SND1-213ENST00000486037 HCG22E2RYF7 251 aa5.2□□□□□ -1.58
SND1-213ENST00000486037 WFDC13Q8IUB5 93 aa5.2□□□□□ -1.58
SND1-213ENST00000486037 C8orf87E5RJ46 101 aa5.19□□□□□ -1.58
SND1-213ENST00000486037 C9orf92A6NGG3 77 aa5.18□□□□□ -1.58
SND1-213ENST00000486037 SCGB1A1P11684 91 aa5.18□□□□□ -1.58
SND1-213ENST00000486037 LINC00313P59037 77 aa5.18□□□□□ -1.58
SND1-213ENST00000486037 KRTAP6-3Q3LI67 103 aa5.18□□□□□ -1.58
SND1-213ENST00000486037 CASC2Q6XLA1 102 aa5.18□□□□□ -1.58
SND1-213ENST00000486037 KRTAP16-1A8MUX0 517 aa5.17□□□□□ -1.58
SND1-213ENST00000486037 hDV103S1A0JD37 113 aa5.16□□□□□ -1.58
SND1-213ENST00000486037 TMEM254Q8TBM7 123 aa5.16□□□□□ -1.58
SND1-213ENST00000486037 MRPL34Q9BQ48 92 aaKnown RBP5.15□□□□□ -1.59
SND1-213ENST00000486037 ATOX1O00244 68 aa5.13□□□□□ -1.59
SND1-213ENST00000486037 KRTAP3-1Q9BYR8 98 aa5.12□□□□□ -1.59
SND1-213ENST00000486037 OCR1Q9BZK8 76 aa5.12□□□□□ -1.59
SND1-213ENST00000486037 MT2AP02795 61 aa5.11□□□□□ -1.59
SND1-213ENST00000486037 Q8N9P0 234 aaPredicted RBP5.1□□□□□ -1.59
SND1-213ENST00000486037 TRAV7A0A075B6U4 112 aa5.09□□□□□ -1.59
SND1-213ENST00000486037 MT1FP04733 61 aa5.09□□□□□ -1.59
SND1-213ENST00000486037 KRTAP9-3Q9BYQ3 159 aa5.09□□□□□ -1.59
SND1-213ENST00000486037 A8MUU9 505 aa5.08□□□□□ -1.6
SND1-213ENST00000486037 NDUFS5O43920 106 aa5.08□□□□□ -1.6
SND1-213ENST00000486037 ANAPC13Q9BS18 74 aa5.08□□□□□ -1.6
SND1-213ENST00000486037 KRTAP19-6Q3LI70 58 aa5.07□□□□□ -1.6
SND1-213ENST00000486037 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
SND1-213ENST00000486037 SMIM20Q8N5G0 67 aa5.07□□□□□ -1.6
SND1-213ENST00000486037 SERP2Q8N6R1 65 aa5.07□□□□□ -1.6
SND1-213ENST00000486037 C20orf166-AS1Q96NR2 134 aa5.07□□□□□ -1.6
SND1-213ENST00000486037 KRTAP20-1Q3LI63 56 aa5.06□□□□□ -1.6
SND1-213ENST00000486037 UQCRQO14949 82 aa5.05□□□□□ -1.6
SND1-213ENST00000486037 RPL37P61927 97 aaKnown RBP5.05□□□□□ -1.6
SND1-213ENST00000486037 Q5W150 140 aa5.05□□□□□ -1.6
SND1-213ENST00000486037 TP53AIP1Q9HCN2 124 aa5.05□□□□□ -1.6
SND1-213ENST00000486037 COX7CP15954 63 aa5.04□□□□□ -1.6
SND1-213ENST00000486037 Q75L30 129 aa5.04□□□□□ -1.6
SND1-213ENST00000486037 H0Y9P7 68 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms