RNA–Protein interactions for RNA: ENST00000485155.1

MDH1-212, Transcript of malate dehydrogenase 1, humanhuman

TSL 1 (best)

Gene MDH1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-212ENST00000485155 HIVEP2P31629 2446 aa2.09□□□□□ -2.07
MDH1-212ENST00000485155 SPTBN5Q9NRC6 3674 aaKnown RBP2.09□□□□□ -2.07
MDH1-212ENST00000485155 USP34Q70CQ2 3546 aa2.09□□□□□ -2.07
MDH1-212ENST00000485155 A0A0D9SG42 100 aa2.09□□□□□ -2.07
MDH1-212ENST00000485155 KRTAP12-1P59990 96 aa2.09□□□□□ -2.07
MDH1-212ENST00000485155 DSPP15924 2871 aaKnown RBP2.09□□□□□ -2.08
MDH1-212ENST00000485155 CELSR2Q9HCU4 2923 aa2.08□□□□□ -2.08
MDH1-212ENST00000485155 CEP290O15078 2479 aa2.08□□□□□ -2.08
MDH1-212ENST00000485155 OTOGLQ3ZCN5 2332 aa2.07□□□□□ -2.08
MDH1-212ENST00000485155 ASH1LQ9NR48 2969 aaKnown RBP2.07□□□□□ -2.08
MDH1-212ENST00000485155 TLN1Q9Y490 2541 aaKnown RBP2.07□□□□□ -2.08
MDH1-212ENST00000485155 FREM2Q5SZK8 3169 aa2.06□□□□□ -2.08
MDH1-212ENST00000485155 DMXL2Q8TDJ6 3036 aa2.06□□□□□ -2.08
MDH1-212ENST00000485155 KRTAP13-4Q3LI77 160 aa2.06□□□□□ -2.08
MDH1-212ENST00000485155 REV3LO60673 3130 aa2.06□□□□□ -2.08
MDH1-212ENST00000485155 TACC2O95359 2948 aa2.05□□□□□ -2.08
MDH1-212ENST00000485155 OTOGQ6ZRI0 2925 aa2.05□□□□□ -2.08
MDH1-212ENST00000485155 LAMA1P25391 3075 aa2.05□□□□□ -2.08
MDH1-212ENST00000485155 BOD1L1Q8NFC6 3051 aa2.05□□□□□ -2.08
MDH1-212ENST00000485155 TLN2Q9Y4G6 2542 aa2.05□□□□□ -2.08
MDH1-212ENST00000485155 PRRC2CQ9Y520 2896 aaKnown RBP2.05□□□□□ -2.08
MDH1-212ENST00000485155 LAMA3Q16787 3333 aa2.04□□□□□ -2.08
MDH1-212ENST00000485155 F8P00451 2351 aa2.04□□□□□ -2.08
MDH1-212ENST00000485155 RIF1Q5UIP0 2472 aaKnown RBP2.04□□□□□ -2.08
MDH1-212ENST00000485155 Q5VSD8 79 aa2.04□□□□□ -2.08
MDH1-212ENST00000485155 NAV2Q8IVL1 2488 aa2.03□□□□□ -2.08
MDH1-212ENST00000485155 DMDP11532 3685 aa2.03□□□□□ -2.08
MDH1-212ENST00000485155 SPEGQ15772 3267 aa2.03□□□□□ -2.08
MDH1-212ENST00000485155 HIVEP3Q5T1R4 2406 aa2.02□□□□□ -2.09
MDH1-212ENST00000485155 FN1P02751 2386 aaKnown RBP2.02□□□□□ -2.09
MDH1-212ENST00000485155 WDFY3Q8IZQ1 3526 aa2.02□□□□□ -2.09
MDH1-212ENST00000485155 LRBAP50851 2863 aa2.02□□□□□ -2.09
MDH1-212ENST00000485155 VCANP13611 3396 aa2.02□□□□□ -2.09
MDH1-212ENST00000485155 BRCA2P51587 3418 aa2.01□□□□□ -2.09
MDH1-212ENST00000485155 ZFHX4Q86UP3 3567 aa2.01□□□□□ -2.09
MDH1-212ENST00000485155 UBR5O95071 2799 aaPredicted RBP2□□□□□ -2.09
MDH1-212ENST00000485155 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
MDH1-212ENST00000485155 APCP25054 2843 aa2□□□□□ -2.09
MDH1-212ENST00000485155 SONP18583 2426 aaKnown RBP2□□□□□ -2.09
MDH1-212ENST00000485155 HRNRQ86YZ3 2850 aaPredicted RBP2□□□□□ -2.09
MDH1-212ENST00000485155 CDH23Q9H251 3354 aa1.99□□□□□ -2.09
MDH1-212ENST00000485155 PTPN13Q12923 2485 aa1.99□□□□□ -2.09
MDH1-212ENST00000485155 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
MDH1-212ENST00000485155 COL12A1Q99715 3063 aa1.99□□□□□ -2.09
MDH1-212ENST00000485155 CSMD1Q96PZ7 3565 aa1.98□□□□□ -2.09
MDH1-212ENST00000485155 SETXQ7Z333 2677 aaKnown RBP1.98□□□□□ -2.09
MDH1-212ENST00000485155 ADGRG4Q8IZF6 3080 aa1.98□□□□□ -2.09
MDH1-212ENST00000485155 DMXL1Q9Y485 3027 aa1.98□□□□□ -2.09
MDH1-212ENST00000485155 JMJD1CQ15652 2540 aa1.97□□□□□ -2.09
MDH1-212ENST00000485155 CELSR1Q9NYQ6 3014 aa1.97□□□□□ -2.09
MDH1-212ENST00000485155 FAM208BQ5VWN6 2430 aa1.96□□□□□ -2.1
MDH1-212ENST00000485155 ZFYVE26Q68DK2 2539 aa1.95□□□□□ -2.1
MDH1-212ENST00000485155 ATMQ13315 3056 aa1.95□□□□□ -2.1
MDH1-212ENST00000485155 DCHS2Q6V1P9 2916 aa1.95□□□□□ -2.1
MDH1-212ENST00000485155 DOPEY1Q5JWR5 2465 aa1.95□□□□□ -2.1
MDH1-212ENST00000485155 NF1P21359 2839 aa1.95□□□□□ -2.1
MDH1-212ENST00000485155 MYO9AB2RTY4 2548 aa1.95□□□□□ -2.1
MDH1-212ENST00000485155 CELSR3Q9NYQ7 3312 aa1.94□□□□□ -2.1
MDH1-212ENST00000485155 UTP20O75691 2785 aaKnown RBP1.94□□□□□ -2.1
MDH1-212ENST00000485155 CCDC168Q8NDH2 2452 aa1.94□□□□□ -2.1
MDH1-212ENST00000485155 MUC6Q6W4X9 2439 aa1.94□□□□□ -2.1
MDH1-212ENST00000485155 CEP295Q9C0D2 2601 aa1.94□□□□□ -2.1
MDH1-212ENST00000485155 CENPEQ02224 2701 aa1.94□□□□□ -2.1
MDH1-212ENST00000485155 SPENQ96T58 3664 aaKnown RBP1.94□□□□□ -2.1
MDH1-212ENST00000485155 ZNF462Q96JM2 2506 aa1.93□□□□□ -2.1
MDH1-212ENST00000485155 USP9XQ93008 2570 aaPredicted RBP1.93□□□□□ -2.1
MDH1-212ENST00000485155 AKAP9Q99996 3911 aa1.93□□□□□ -2.1
MDH1-212ENST00000485155 COL6A5A8TX70 2615 aa1.93□□□□□ -2.1
MDH1-212ENST00000485155 TEX15Q9BXT5 2789 aa1.93□□□□□ -2.1
MDH1-212ENST00000485155 PIEZO1Q92508 2521 aa1.92□□□□□ -2.1
MDH1-212ENST00000485155 MTORP42345 2549 aa1.92□□□□□ -2.1
MDH1-212ENST00000485155 ANKRD11Q6UB99 2663 aaPredicted RBP1.92□□□□□ -2.1
MDH1-212ENST00000485155 SMG1Q96Q15 3661 aaKnown RBP1.91□□□□□ -2.1
MDH1-212ENST00000485155 TNP1P09430 55 aa1.91□□□□□ -2.1
MDH1-212ENST00000485155 KRTAP10-10P60014 251 aa1.91□□□□□ -2.1
MDH1-212ENST00000485155 SMR3AQ99954 134 aa1.91□□□□□ -2.1
MDH1-212ENST00000485155 LOC400499M0QZD8 3231 aa1.91□□□□□ -2.1
MDH1-212ENST00000485155 C9orf92A6NGG3 77 aa1.9□□□□□ -2.11
MDH1-212ENST00000485155 GCN1Q92616 2671 aaKnown RBP1.9□□□□□ -2.11
MDH1-212ENST00000485155 VWFP04275 2813 aa1.89□□□□□ -2.11
MDH1-212ENST00000485155 UNC79Q9P2D8 2635 aa1.89□□□□□ -2.11
MDH1-212ENST00000485155 MEGF8Q7Z7M0 2845 aa1.89□□□□□ -2.11
MDH1-212ENST00000485155 TENM4Q6N022 2769 aa1.88□□□□□ -2.11
MDH1-212ENST00000485155 ACANP16112 2415 aa1.88□□□□□ -2.11
MDH1-212ENST00000485155 CHD8Q9HCK8 2581 aa1.88□□□□□ -2.11
MDH1-212ENST00000485155 CRYBG3Q68DQ2 2970 aa1.87□□□□□ -2.11
MDH1-212ENST00000485155 DNAH1Q9P2D7 4330 aa1.87□□□□□ -2.11
MDH1-212ENST00000485155 VPS13DQ5THJ4 4388 aa1.87□□□□□ -2.11
MDH1-212ENST00000485155 NBEAL2Q6ZNJ1 2754 aa1.87□□□□□ -2.11
MDH1-212ENST00000485155 HELZ2Q9BYK8 2649 aaKnown RBP1.87□□□□□ -2.11
MDH1-212ENST00000485155 MYO15AQ9UKN7 3530 aa1.86□□□□□ -2.11
MDH1-212ENST00000485155 PKD1L2Q7Z442 2459 aa1.86□□□□□ -2.11
MDH1-212ENST00000485155 NIPBLQ6KC79 2804 aaeCLIP1.86□□□□□ -2.11
MDH1-212ENST00000485155 TTC28Q96AY4 2481 aa1.85□□□□□ -2.11
MDH1-212ENST00000485155 NBPF19A0A087WUL8 3843 aa1.85□□□□□ -2.11
MDH1-212ENST00000485155 HECTD1Q9ULT8 2610 aa1.85□□□□□ -2.11
MDH1-212ENST00000485155 FBN1P35555 2871 aaKnown RBP1.85□□□□□ -2.11
MDH1-212ENST00000485155 SRRM2Q9UQ35 2752 aaKnown RBP1.85□□□□□ -2.11
MDH1-212ENST00000485155 TGP01266 2768 aa1.84□□□□□ -2.11
MDH1-212ENST00000485155 KRTAP6-3Q3LI67 103 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 239.1 ms