RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 Q6ZSA8 131 aa4.41□□□□□ -1.7
SHROOM3-206ENST00000484236 CIRBP-AS1Q8TBR5 109 aa4.41□□□□□ -1.7
SHROOM3-206ENST00000484236 ALMS1Q8TCU4 4167 aa4.41□□□□□ -1.7
SHROOM3-206ENST00000484236 MMP24-AS1A0A0U1RRL7 71 aa4.4□□□□□ -1.71
SHROOM3-206ENST00000484236 CDK2AP2O75956 126 aa4.4□□□□□ -1.71
SHROOM3-206ENST00000484236 KRTAP10-2P60368 255 aa4.4□□□□□ -1.71
SHROOM3-206ENST00000484236 ASB16-AS1Q495Z4 193 aa4.4□□□□□ -1.71
SHROOM3-206ENST00000484236 TP53AIP1Q9HCN2 124 aa4.4□□□□□ -1.71
SHROOM3-206ENST00000484236 SMIM26A0A096LP01 95 aa4.39□□□□□ -1.71
SHROOM3-206ENST00000484236 hDV103S1A0JD37 113 aa4.39□□□□□ -1.71
SHROOM3-206ENST00000484236 FAM229BQ4G0N7 80 aa4.39□□□□□ -1.71
SHROOM3-206ENST00000484236 DNAH8Q96JB1 4490 aa4.38□□□□□ -1.71
SHROOM3-206ENST00000484236 A0A1B0GVX0 72 aa4.38□□□□□ -1.71
SHROOM3-206ENST00000484236 C8orf17Q9NRJ1 99 aa4.38□□□□□ -1.71
SHROOM3-206ENST00000484236 SRRM2Q9UQ35 2752 aaKnown RBP4.38□□□□□ -1.71
SHROOM3-206ENST00000484236 FBN3Q75N90 2809 aa4.38□□□□□ -1.71
SHROOM3-206ENST00000484236 HECTD4Q9Y4D8 3996 aa4.38□□□□□ -1.71
SHROOM3-206ENST00000484236 DNHD1Q96M86 4753 aa4.37□□□□□ -1.71
SHROOM3-206ENST00000484236 TRAV22A0A0B4J277 110 aa4.37□□□□□ -1.71
SHROOM3-206ENST00000484236 H0Y9P7 68 aa4.37□□□□□ -1.71
SHROOM3-206ENST00000484236 HRCT1Q6UXD1 115 aa4.37□□□□□ -1.71
SHROOM3-206ENST00000484236 TGP01266 2768 aa4.36□□□□□ -1.71
SHROOM3-206ENST00000484236 KRTAP10-1P60331 282 aa4.36□□□□□ -1.71
SHROOM3-206ENST00000484236 SPANXA2-OT1Q8N9U9 137 aa4.36□□□□□ -1.71
SHROOM3-206ENST00000484236 CYP4F30PQ9H0H9 118 aa4.36□□□□□ -1.71
SHROOM3-206ENST00000484236 ANAPC11Q9NYG5 84 aa4.36□□□□□ -1.71
SHROOM3-206ENST00000484236 KMT2AQ03164 3969 aa4.36□□□□□ -1.71
SHROOM3-206ENST00000484236 Q5XG85 94 aa4.35□□□□□ -1.71
SHROOM3-206ENST00000484236 LINC00208Q96KT6 92 aa4.35□□□□□ -1.71
SHROOM3-206ENST00000484236 C8orf87E5RJ46 101 aa4.34□□□□□ -1.71
SHROOM3-206ENST00000484236 MRPL34Q9BQ48 92 aaKnown RBP4.34□□□□□ -1.71
SHROOM3-206ENST00000484236 DNAH11Q96DT5 4516 aa4.34□□□□□ -1.72
SHROOM3-206ENST00000484236 IGHV6-1A0A0B4J1U7 121 aa4.33□□□□□ -1.72
SHROOM3-206ENST00000484236 C1orf64Q8NEQ6 169 aa4.33□□□□□ -1.72
SHROOM3-206ENST00000484236 SVIPQ8NHG7 77 aa4.33□□□□□ -1.72
SHROOM3-206ENST00000484236 LINC00336Q6ZUF6 198 aa4.32□□□□□ -1.72
SHROOM3-206ENST00000484236 DNAH5Q8TE73 4624 aa4.32□□□□□ -1.72
SHROOM3-206ENST00000484236 FP248Q71RG6 208 aaPredicted RBP4.31□□□□□ -1.72
SHROOM3-206ENST00000484236 LIMD2Q9BT23 127 aa4.3□□□□□ -1.72
SHROOM3-206ENST00000484236 FRAS1Q86XX4 4008 aa4.3□□□□□ -1.72
SHROOM3-206ENST00000484236 A0A087X002 238 aa4.29□□□□□ -1.72
SHROOM3-206ENST00000484236 KRTAP1-4P0C5Y4 121 aa4.29□□□□□ -1.72
SHROOM3-206ENST00000484236 C4orf26Q17RF5 130 aa4.29□□□□□ -1.72
SHROOM3-206ENST00000484236 KRTAP13-2Q52LG2 175 aa4.29□□□□□ -1.72
SHROOM3-206ENST00000484236 SPINK6Q6UWN8 80 aa4.29□□□□□ -1.72
SHROOM3-206ENST00000484236 FAT2Q9NYQ8 4349 aa4.28□□□□□ -1.72
SHROOM3-206ENST00000484236 PKD1P98161 4303 aa4.28□□□□□ -1.72
SHROOM3-206ENST00000484236 IGLV7-46A0A075B6I9 117 aa4.28□□□□□ -1.72
SHROOM3-206ENST00000484236 NDUFS5O43920 106 aa4.28□□□□□ -1.72
SHROOM3-206ENST00000484236 LOC101927531A0A1B0GV80 90 aa4.26□□□□□ -1.73
SHROOM3-206ENST00000484236 LINC00313P59037 77 aa4.26□□□□□ -1.73
SHROOM3-206ENST00000484236 RPS29P62273 56 aaKnown RBP4.26□□□□□ -1.73
SHROOM3-206ENST00000484236 C1orf195Q5TG92 126 aa4.26□□□□□ -1.73
SHROOM3-206ENST00000484236 NOTCH2NLQ7Z3S9 236 aa4.26□□□□□ -1.73
SHROOM3-206ENST00000484236 V9GYY9 64 aa4.26□□□□□ -1.73
SHROOM3-206ENST00000484236 SPINK1P00995 79 aa4.25□□□□□ -1.73
SHROOM3-206ENST00000484236 PLA2G1BP04054 148 aaKnown RBP4.25□□□□□ -1.73
SHROOM3-206ENST00000484236 Q1T7F1 81 aa4.25□□□□□ -1.73
SHROOM3-206ENST00000484236 LRP1BQ9NZR2 4599 aa4.24□□□□□ -1.73
SHROOM3-206ENST00000484236 PRR4Q16378 134 aa4.24□□□□□ -1.73
SHROOM3-206ENST00000484236 KRTAP13-3Q3SY46 172 aa4.24□□□□□ -1.73
SHROOM3-206ENST00000484236 SPAG11AQ6PDA7 123 aa4.24□□□□□ -1.73
SHROOM3-206ENST00000484236 Q8N9P0 234 aaPredicted RBP4.24□□□□□ -1.73
SHROOM3-206ENST00000484236 TYMSOSQ8TAI1 123 aa4.24□□□□□ -1.73
SHROOM3-206ENST00000484236 A0A1B0GVY2 172 aa4.23□□□□□ -1.73
SHROOM3-206ENST00000484236 MPLKIPQ8TAP9 179 aa4.22□□□□□ -1.73
SHROOM3-206ENST00000484236 PCOTHQ58A44 107 aa4.21□□□□□ -1.74
SHROOM3-206ENST00000484236 SACSQ9NZJ4 4579 aa4.2□□□□□ -1.74
SHROOM3-206ENST00000484236 KRTAP16-1A8MUX0 517 aa4.2□□□□□ -1.74
SHROOM3-206ENST00000484236 Q5W150 140 aa4.2□□□□□ -1.74
SHROOM3-206ENST00000484236 COA5Q86WW8 74 aa4.19□□□□□ -1.74
SHROOM3-206ENST00000484236 LINC00304Q8N9R0 145 aa4.19□□□□□ -1.74
SHROOM3-206ENST00000484236 HYDINQ4G0P3 5121 aa4.18□□□□□ -1.74
SHROOM3-206ENST00000484236 IGKV2-30P06310 120 aa4.16□□□□□ -1.74
SHROOM3-206ENST00000484236 PRR26Q8N8Z3 221 aa4.16□□□□□ -1.74
SHROOM3-206ENST00000484236 PRO0628Q9UI54 55 aa4.16□□□□□ -1.74
SHROOM3-206ENST00000484236 ACYP2P14621 99 aa4.15□□□□□ -1.75
SHROOM3-206ENST00000484236 VPS13BQ7Z7G8 4022 aa4.14□□□□□ -1.75
SHROOM3-206ENST00000484236 SMR3BP02814 79 aaPredicted RBP4.14□□□□□ -1.75
SHROOM3-206ENST00000484236 HRES1P13985 223 aa4.14□□□□□ -1.75
SHROOM3-206ENST00000484236 KRTAP10-4P60372 401 aaPredicted RBP4.14□□□□□ -1.75
SHROOM3-206ENST00000484236 DYNC1H1Q14204 4646 aaKnown RBP4.13□□□□□ -1.75
SHROOM3-206ENST00000484236 DMAC1Q96GE9 116 aa4.13□□□□□ -1.75
SHROOM3-206ENST00000484236 PSPHP1O15172 72 aa4.11□□□□□ -1.75
SHROOM3-206ENST00000484236 BRK1Q8WUW1 75 aa4.11□□□□□ -1.75
SHROOM3-206ENST00000484236 LINC01558Q9Y6Z2 57 aa4.11□□□□□ -1.75
SHROOM3-206ENST00000484236 A8MUN3 132 aa4.1□□□□□ -1.75
SHROOM3-206ENST00000484236 Q5VV11 94 aa4.1□□□□□ -1.75
SHROOM3-206ENST00000484236 PKHD1P08F94 4074 aa4.1□□□□□ -1.75
SHROOM3-206ENST00000484236 APOBP04114 4563 aaKnown RBP4.09□□□□□ -1.75
SHROOM3-206ENST00000484236 Q75L30 129 aa4.09□□□□□ -1.75
SHROOM3-206ENST00000484236 C20orf166-AS1Q96NR2 134 aa4.08□□□□□ -1.76
SHROOM3-206ENST00000484236 RETNLBQ9BQ08 111 aa4.08□□□□□ -1.76
SHROOM3-206ENST00000484236 PRR15LQ9BU68 103 aa4.08□□□□□ -1.76
SHROOM3-206ENST00000484236 IGKV2D-30A0A075B6S6 120 aa4.07□□□□□ -1.76
SHROOM3-206ENST00000484236 A8MUU9 505 aa4.07□□□□□ -1.76
SHROOM3-206ENST00000484236 C7orf65Q6ZTY9 151 aa4.07□□□□□ -1.76
SHROOM3-206ENST00000484236 PKHD1L1Q86WI1 4243 aa4.06□□□□□ -1.76
SHROOM3-206ENST00000484236 CHKB-CPT1BH3BT56 60 aa4.06□□□□□ -1.76
SHROOM3-206ENST00000484236 RYR2Q92736 4967 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms