RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 PCOTHQ58A44 107 aa5.42□□□□□ -1.54
CPSF4-213ENST00000484112 A0A1B0GW54 56 aa5.41□□□□□ -1.54
CPSF4-213ENST00000484112 C9orf92A6NGG3 77 aa5.41□□□□□ -1.54
CPSF4-213ENST00000484112 CCKP06307 115 aa5.41□□□□□ -1.54
CPSF4-213ENST00000484112 PDE6GP18545 87 aa5.4□□□□□ -1.54
CPSF4-213ENST00000484112 LOC110117498A0A087WWA1 95 aa5.39□□□□□ -1.55
CPSF4-213ENST00000484112 SIGMAR1Q99720 223 aa5.39□□□□□ -1.55
CPSF4-213ENST00000484112 M0R2T5 61 aa5.38□□□□□ -1.55
CPSF4-213ENST00000484112 KRTAP10-6P60371 365 aaPredicted RBP5.38□□□□□ -1.55
CPSF4-213ENST00000484112 LORP23490 312 aaPredicted RBP5.37□□□□□ -1.55
CPSF4-213ENST00000484112 RPL37P61927 97 aaKnown RBP5.37□□□□□ -1.55
CPSF4-213ENST00000484112 Q96NJ1 140 aa5.37□□□□□ -1.55
CPSF4-213ENST00000484112 C14orf132Q9NPU4 83 aa5.37□□□□□ -1.55
CPSF4-213ENST00000484112 A0A1B0GV72 72 aa5.36□□□□□ -1.55
CPSF4-213ENST00000484112 SCGB1A1P11684 91 aa5.35□□□□□ -1.55
CPSF4-213ENST00000484112 Q6ZQT0 140 aa5.35□□□□□ -1.55
CPSF4-213ENST00000484112 Q75L30 129 aa5.35□□□□□ -1.55
CPSF4-213ENST00000484112 LINC00472Q9H8W2 130 aa5.35□□□□□ -1.55
CPSF4-213ENST00000484112 J3KT08 172 aa5.33□□□□□ -1.56
CPSF4-213ENST00000484112 MT-ATP8P03928 68 aa5.33□□□□□ -1.56
CPSF4-213ENST00000484112 IGKV4-1P06312 121 aa5.33□□□□□ -1.56
CPSF4-213ENST00000484112 LINC00643Q86TS7 51 aa5.33□□□□□ -1.56
CPSF4-213ENST00000484112 COX6B2Q6YFQ2 88 aa5.32□□□□□ -1.56
CPSF4-213ENST00000484112 ATP11AUNQ6ZP68 121 aa5.31□□□□□ -1.56
CPSF4-213ENST00000484112 C20orf166-AS1Q96NR2 134 aa5.31□□□□□ -1.56
CPSF4-213ENST00000484112 IMUPQ9GZP8 106 aa5.31□□□□□ -1.56
CPSF4-213ENST00000484112 LINC00846Q9NV44 126 aa5.3□□□□□ -1.56
CPSF4-213ENST00000484112 LINC00313P59037 77 aa5.29□□□□□ -1.56
CPSF4-213ENST00000484112 A8MUU9 505 aa5.28□□□□□ -1.56
CPSF4-213ENST00000484112 C8orf87E5RJ46 101 aa5.28□□□□□ -1.56
CPSF4-213ENST00000484112 ATP5EP2Q5VTU8 51 aa5.28□□□□□ -1.56
CPSF4-213ENST00000484112 A0A1B0GVX0 72 aa5.26□□□□□ -1.57
CPSF4-213ENST00000484112 NDUFB1O75438 58 aa5.26□□□□□ -1.57
CPSF4-213ENST00000484112 UBL5Q9BZL1 73 aa5.26□□□□□ -1.57
CPSF4-213ENST00000484112 KRTAP9-7A8MTY7 169 aa5.25□□□□□ -1.57
CPSF4-213ENST00000484112 DSCR10P59022 87 aa5.25□□□□□ -1.57
CPSF4-213ENST00000484112 DEFB116Q30KQ4 102 aa5.25□□□□□ -1.57
CPSF4-213ENST00000484112 IGHV6-1A0A0B4J1U7 121 aa5.24□□□□□ -1.57
CPSF4-213ENST00000484112 KRTAP16-1A8MUX0 517 aa5.24□□□□□ -1.57
CPSF4-213ENST00000484112 PCP4P48539 62 aa5.24□□□□□ -1.57
CPSF4-213ENST00000484112 NREPQ16612 68 aa5.24□□□□□ -1.57
CPSF4-213ENST00000484112 A8MWP4 228 aa5.23□□□□□ -1.57
CPSF4-213ENST00000484112 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
CPSF4-213ENST00000484112 Q6ZVQ6 151 aa5.23□□□□□ -1.57
CPSF4-213ENST00000484112 CXCL6P80162 114 aa5.21□□□□□ -1.58
CPSF4-213ENST00000484112 NOTCH2NLQ7Z3S9 236 aa5.2□□□□□ -1.58
CPSF4-213ENST00000484112 IGKV3D-7A0A0C4DH55 119 aa5.19□□□□□ -1.58
CPSF4-213ENST00000484112 HIST1H4AP62805 103 aaKnown RBP5.19□□□□□ -1.58
CPSF4-213ENST00000484112 FLGP20930 4061 aaPredicted RBP5.18□□□□□ -1.58
CPSF4-213ENST00000484112 PRR15Q8IV56 129 aa5.18□□□□□ -1.58
CPSF4-213ENST00000484112 Q8N9P0 234 aaPredicted RBP5.17□□□□□ -1.58
CPSF4-213ENST00000484112 C8orf17Q9NRJ1 99 aa5.17□□□□□ -1.58
CPSF4-213ENST00000484112 BPY2O14599 106 aa5.16□□□□□ -1.58
CPSF4-213ENST00000484112 FAM236AA0A1B0GUQ0 79 aa5.15□□□□□ -1.59
CPSF4-213ENST00000484112 FAM236BA0A1B0GV22 79 aa5.15□□□□□ -1.59
CPSF4-213ENST00000484112 TMEM254Q8TBM7 123 aa5.13□□□□□ -1.59
CPSF4-213ENST00000484112 ZCCHC13Q8WW36 166 aaKnown RBP5.13□□□□□ -1.59
CPSF4-213ENST00000484112 ANAPC13Q9BS18 74 aa5.13□□□□□ -1.59
CPSF4-213ENST00000484112 SSPOA2VEC9 5147 aa5.12□□□□□ -1.59
CPSF4-213ENST00000484112 ATOX1O00244 68 aa5.12□□□□□ -1.59
CPSF4-213ENST00000484112 A0A087WVE0 104 aa5.11□□□□□ -1.59
CPSF4-213ENST00000484112 MMP24-AS1A0A0U1RRL7 71 aa5.11□□□□□ -1.59
CPSF4-213ENST00000484112 MRPL34Q9BQ48 92 aaKnown RBP5.11□□□□□ -1.59
CPSF4-213ENST00000484112 USH2AO75445 5202 aa5.11□□□□□ -1.59
CPSF4-213ENST00000484112 hDV103S1A0JD37 113 aa5.1□□□□□ -1.59
CPSF4-213ENST00000484112 K7EQZ3 153 aa5.1□□□□□ -1.59
CPSF4-213ENST00000484112 KRTAP9-8Q9BYQ0 159 aa5.09□□□□□ -1.59
CPSF4-213ENST00000484112 SMIM20Q8N5G0 67 aa5.07□□□□□ -1.6
CPSF4-213ENST00000484112 RBM12B-AS1Q9P1G2 102 aa5.07□□□□□ -1.6
CPSF4-213ENST00000484112 MPLKIPQ8TAP9 179 aa5.06□□□□□ -1.6
CPSF4-213ENST00000484112 COX7CP15954 63 aa5.05□□□□□ -1.6
CPSF4-213ENST00000484112 SERP2Q8N6R1 65 aa5.05□□□□□ -1.6
CPSF4-213ENST00000484112 UQCRQO14949 82 aa5.04□□□□□ -1.6
CPSF4-213ENST00000484112 HRES1P13985 223 aa5.04□□□□□ -1.6
CPSF4-213ENST00000484112 SPINK7P58062 85 aa5.04□□□□□ -1.6
CPSF4-213ENST00000484112 CASC2Q6XLA1 102 aa5.04□□□□□ -1.6
CPSF4-213ENST00000484112 Q8N9L7 120 aa5.04□□□□□ -1.6
CPSF4-213ENST00000484112 TRAV7A0A075B6U4 112 aa5.03□□□□□ -1.6
CPSF4-213ENST00000484112 KRTAP19-1Q8IUB9 90 aa5.03□□□□□ -1.6
CPSF4-213ENST00000484112 NDUFS5O43920 106 aa5.02□□□□□ -1.61
CPSF4-213ENST00000484112 WFDC13Q8IUB5 93 aa5.02□□□□□ -1.61
CPSF4-213ENST00000484112 FCGBPQ9Y6R7 5405 aaPredicted RBP5.02□□□□□ -1.61
CPSF4-213ENST00000484112 FAM236DA0A1B0GTK5 79 aa5.01□□□□□ -1.61
CPSF4-213ENST00000484112 HCG22E2RYF7 251 aa5.01□□□□□ -1.61
CPSF4-213ENST00000484112 CCDC179H3BU77 68 aa5.01□□□□□ -1.61
CPSF4-213ENST00000484112 FAM236CP0DP71 79 aa5.01□□□□□ -1.61
CPSF4-213ENST00000484112 MT2AP02795 61 aa5□□□□□ -1.61
CPSF4-213ENST00000484112 LCE2BO14633 110 aa4.99□□□□□ -1.61
CPSF4-213ENST00000484112 OCR1Q9BZK8 76 aa4.99□□□□□ -1.61
CPSF4-213ENST00000484112 MT1FP04733 61 aa4.97□□□□□ -1.61
CPSF4-213ENST00000484112 TP53AIP1Q9HCN2 124 aa4.97□□□□□ -1.61
CPSF4-213ENST00000484112 KRTAP10-10P60014 251 aa4.96□□□□□ -1.62
CPSF4-213ENST00000484112 C7orf65Q6ZTY9 151 aa4.96□□□□□ -1.62
CPSF4-213ENST00000484112 SYNE2Q8WXH0 6885 aaKnown RBP4.96□□□□□ -1.62
CPSF4-213ENST00000484112 Q5W150 140 aa4.94□□□□□ -1.62
CPSF4-213ENST00000484112 KRTAP9-3Q9BYQ3 159 aa4.94□□□□□ -1.62
CPSF4-213ENST00000484112 KLKP1Q107X0 134 aa4.93□□□□□ -1.62
CPSF4-213ENST00000484112 MACF1Q9UPN3 7388 aaKnown RBP4.92□□□□□ -1.62
CPSF4-213ENST00000484112 IGKV2D-30A0A075B6S6 120 aa4.9□□□□□ -1.63
CPSF4-213ENST00000484112 IGKV2-30P06310 120 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms