RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 ZCCHC13Q8WW36 166 aaKnown RBP15.2■□□□□ 0.02
SHOX2-204ENST00000483851 LIMD2Q9BT23 127 aa15.2■□□□□ 0.02
SHOX2-204ENST00000483851 C5orf47Q569G3 176 aa15.18■□□□□ 0.02
SHOX2-204ENST00000483851 PRR26Q8N8Z3 221 aa15.18■□□□□ 0.02
SHOX2-204ENST00000483851 FAT1Q14517 4588 aa15.18■□□□□ 0.02
SHOX2-204ENST00000483851 SPINK1P00995 79 aa15.18■□□□□ 0.02
SHOX2-204ENST00000483851 ATP5EP56381 51 aaPredicted RBP15.16■□□□□ 0.02
SHOX2-204ENST00000483851 SPAG11AQ6PDA7 123 aa15.16■□□□□ 0.02
SHOX2-204ENST00000483851 SERP1Q9Y6X1 66 aa15.16■□□□□ 0.02
SHOX2-204ENST00000483851 CASC2Q6XLA1 102 aa15.15■□□□□ 0.02
SHOX2-204ENST00000483851 RPS29P62273 56 aaKnown RBP15.14■□□□□ 0.01
SHOX2-204ENST00000483851 Q5VSD8 79 aa15.14■□□□□ 0.01
SHOX2-204ENST00000483851 MMP24-AS1A0A0U1RRL7 71 aa15.12■□□□□ 0.01
SHOX2-204ENST00000483851 LINC00304Q8N9R0 145 aa15.11■□□□□ 0.01
SHOX2-204ENST00000483851 A0A1B0GVX0 72 aa15.1■□□□□ 0.01
SHOX2-204ENST00000483851 EPPK1P58107 5090 aaKnown RBP15.05■□□□□ 0
SHOX2-204ENST00000483851 C1orf195Q5TG92 126 aa15.05■□□□□ -0
SHOX2-204ENST00000483851 HSPG2P98160 4391 aa15.04■□□□□ -0
SHOX2-204ENST00000483851 C8orf17Q9NRJ1 99 aa15.01□□□□□ -0.01
SHOX2-204ENST00000483851 PKHD1L1Q86WI1 4243 aa15.01□□□□□ -0.01
SHOX2-204ENST00000483851 IGHV6-1A0A0B4J1U7 121 aa14.99□□□□□ -0.01
SHOX2-204ENST00000483851 hDV103S1A0JD37 113 aa14.99□□□□□ -0.01
SHOX2-204ENST00000483851 Q8N1X5 172 aa14.99□□□□□ -0.01
SHOX2-204ENST00000483851 RYR1P21817 5038 aa14.98□□□□□ -0.01
SHOX2-204ENST00000483851 MP68P56378 58 aa14.97□□□□□ -0.01
SHOX2-204ENST00000483851 C8orf87E5RJ46 101 aa14.95□□□□□ -0.02
SHOX2-204ENST00000483851 H3BPC8 53 aa14.94□□□□□ -0.02
SHOX2-204ENST00000483851 H0Y9P7 68 aa14.92□□□□□ -0.02
SHOX2-204ENST00000483851 TRAV22A0A0B4J277 110 aa14.9□□□□□ -0.02
SHOX2-204ENST00000483851 LINC00208Q96KT6 92 aa14.89□□□□□ -0.03
SHOX2-204ENST00000483851 KRTAP10-8P60410 259 aa14.86□□□□□ -0.03
SHOX2-204ENST00000483851 KRTAP17-1Q9BYP8 105 aa14.86□□□□□ -0.03
SHOX2-204ENST00000483851 MRPL34Q9BQ48 92 aaKnown RBP14.85□□□□□ -0.03
SHOX2-204ENST00000483851 SMIM26A0A096LP01 95 aa14.84□□□□□ -0.03
SHOX2-204ENST00000483851 TP53AIP1Q9HCN2 124 aa14.84□□□□□ -0.03
SHOX2-204ENST00000483851 NOTCH2NLQ7Z3S9 236 aa14.84□□□□□ -0.03
SHOX2-204ENST00000483851 LINC00313P59037 77 aa14.82□□□□□ -0.04
SHOX2-204ENST00000483851 CYP4F30PQ9H0H9 118 aa14.82□□□□□ -0.04
SHOX2-204ENST00000483851 FP248Q71RG6 208 aaPredicted RBP14.8□□□□□ -0.04
SHOX2-204ENST00000483851 KIAA1109Q2LD37 5005 aa14.8□□□□□ -0.04
SHOX2-204ENST00000483851 C1orf64Q8NEQ6 169 aa14.78□□□□□ -0.04
SHOX2-204ENST00000483851 C4orf26Q17RF5 130 aa14.76□□□□□ -0.05
SHOX2-204ENST00000483851 BIRC6Q9NR09 4857 aa14.76□□□□□ -0.05
SHOX2-204ENST00000483851 SPANXA2-OT1Q8N9U9 137 aa14.74□□□□□ -0.05
SHOX2-204ENST00000483851 NDUFS5O43920 106 aa14.69□□□□□ -0.06
SHOX2-204ENST00000483851 Q8N9P0 234 aaPredicted RBP14.66□□□□□ -0.06
SHOX2-204ENST00000483851 KRTAP16-1A8MUX0 517 aa14.65□□□□□ -0.06
SHOX2-204ENST00000483851 PRR4Q16378 134 aa14.65□□□□□ -0.06
SHOX2-204ENST00000483851 FLG2Q5D862 2391 aaPredicted RBP14.65□□□□□ -0.06
SHOX2-204ENST00000483851 SVIPQ8NHG7 77 aa14.62□□□□□ -0.07
SHOX2-204ENST00000483851 TNXBP22105 4242 aa14.6□□□□□ -0.07
SHOX2-204ENST00000483851 KRTAP13-3Q3SY46 172 aa14.59□□□□□ -0.07
SHOX2-204ENST00000483851 LRP1Q07954 4544 aaKnown RBP14.59□□□□□ -0.07
SHOX2-204ENST00000483851 MT1HL1P0DM35 61 aa14.59□□□□□ -0.07
SHOX2-204ENST00000483851 FAT3Q8TDW7 4589 aa14.56□□□□□ -0.08
SHOX2-204ENST00000483851 IGLV7-46A0A075B6I9 117 aa14.55□□□□□ -0.08
SHOX2-204ENST00000483851 Q5W150 140 aa14.53□□□□□ -0.08
SHOX2-204ENST00000483851 RETNLBQ9BQ08 111 aa14.52□□□□□ -0.09
SHOX2-204ENST00000483851 PCOTHQ58A44 107 aa14.48□□□□□ -0.09
SHOX2-204ENST00000483851 MPLKIPQ8TAP9 179 aa14.46□□□□□ -0.09
SHOX2-204ENST00000483851 KRTAP4-5Q9BYR2 181 aa14.46□□□□□ -0.1
SHOX2-204ENST00000483851 LOC101927531A0A1B0GV80 90 aa14.45□□□□□ -0.1
SHOX2-204ENST00000483851 Q1T7F1 81 aa14.43□□□□□ -0.1
SHOX2-204ENST00000483851 HERC2O95714 4834 aa14.41□□□□□ -0.1
SHOX2-204ENST00000483851 DMBT1Q9UGM3 2413 aaPredicted RBP14.4□□□□□ -0.1
SHOX2-204ENST00000483851 C20orf166-AS1Q96NR2 134 aa14.38□□□□□ -0.11
SHOX2-204ENST00000483851 C9orf92A6NGG3 77 aa14.37□□□□□ -0.11
SHOX2-204ENST00000483851 A8MUU9 505 aa14.35□□□□□ -0.11
SHOX2-204ENST00000483851 MYCBP2O75592 4640 aa14.35□□□□□ -0.11
SHOX2-204ENST00000483851 COA5Q86WW8 74 aa14.32□□□□□ -0.12
SHOX2-204ENST00000483851 Q75L30 129 aa14.24□□□□□ -0.13
SHOX2-204ENST00000483851 IGKV2-30P06310 120 aa14.23□□□□□ -0.13
SHOX2-204ENST00000483851 V9GYY9 64 aa14.23□□□□□ -0.13
SHOX2-204ENST00000483851 HRES1P13985 223 aa14.2□□□□□ -0.14
SHOX2-204ENST00000483851 J3QL48 77 aa14.11□□□□□ -0.15
SHOX2-204ENST00000483851 PSPHP1O15172 72 aa14.11□□□□□ -0.15
SHOX2-204ENST00000483851 ABCA13Q86UQ4 5058 aa14.1□□□□□ -0.15
SHOX2-204ENST00000483851 PRO0628Q9UI54 55 aa14.09□□□□□ -0.15
SHOX2-204ENST00000483851 A8MUN3 132 aa14.08□□□□□ -0.16
SHOX2-204ENST00000483851 TPRXLQ17RH7 258 aa14.08□□□□□ -0.16
SHOX2-204ENST00000483851 IGKV2D-30A0A075B6S6 120 aa14.07□□□□□ -0.16
SHOX2-204ENST00000483851 XP32Q5T750 250 aa14.07□□□□□ -0.16
SHOX2-204ENST00000483851 C7orf65Q6ZTY9 151 aa14.07□□□□□ -0.16
SHOX2-204ENST00000483851 DMAC1Q96GE9 116 aa14.07□□□□□ -0.16
SHOX2-204ENST00000483851 RPL37P61927 97 aaKnown RBP14.05□□□□□ -0.16
SHOX2-204ENST00000483851 Q5VV11 94 aa14.04□□□□□ -0.16
SHOX2-204ENST00000483851 ACYP2P14621 99 aa14.01□□□□□ -0.17
SHOX2-204ENST00000483851 BRK1Q8WUW1 75 aa14.01□□□□□ -0.17
SHOX2-204ENST00000483851 ATP11AUNQ6ZP68 121 aa14.01□□□□□ -0.17
SHOX2-204ENST00000483851 PCLOQ9Y6V0 5065 aa13.98□□□□□ -0.17
SHOX2-204ENST00000483851 LINC01558Q9Y6Z2 57 aa13.97□□□□□ -0.17
SHOX2-204ENST00000483851 PRR15LQ9BU68 103 aa13.95□□□□□ -0.18
SHOX2-204ENST00000483851 SPINK7P58062 85 aa13.88□□□□□ -0.19
SHOX2-204ENST00000483851 CHKB-CPT1BH3BT56 60 aa13.8□□□□□ -0.2
SHOX2-204ENST00000483851 A8MU10 97 aa13.65□□□□□ -0.22
SHOX2-204ENST00000483851 A6NED7 52 aa13.62□□□□□ -0.23
SHOX2-204ENST00000483851 LCA10Q71F78 164 aa13.62□□□□□ -0.23
SHOX2-204ENST00000483851 SEC61BP60468 96 aaKnown RBP13.59□□□□□ -0.23
SHOX2-204ENST00000483851 COX6B2Q6YFQ2 88 aa13.59□□□□□ -0.23
SHOX2-204ENST00000483851 CDC42SE1Q9NRR8 79 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms