RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 DSCR10P59022 87 aa5.89□□□□□ -1.47
LIMK1-205ENST00000483414 HCG22E2RYF7 251 aa5.88□□□□□ -1.47
LIMK1-205ENST00000483414 SPTSSBQ8NFR3 76 aa5.88□□□□□ -1.47
LIMK1-205ENST00000483414 MYCBP2O75592 4640 aa5.87□□□□□ -1.47
LIMK1-205ENST00000483414 IGLV9-49A0A0B4J1Y8 123 aa5.87□□□□□ -1.47
LIMK1-205ENST00000483414 LRP1Q07954 4544 aaKnown RBP5.87□□□□□ -1.47
LIMK1-205ENST00000483414 TRAV22A0A0B4J277 110 aa5.87□□□□□ -1.47
LIMK1-205ENST00000483414 hDV103S1A0JD37 113 aa5.87□□□□□ -1.47
LIMK1-205ENST00000483414 PMAIP1Q13794 54 aa5.86□□□□□ -1.47
LIMK1-205ENST00000483414 LINC00208Q96KT6 92 aa5.86□□□□□ -1.47
LIMK1-205ENST00000483414 MP68P56378 58 aa5.85□□□□□ -1.47
LIMK1-205ENST00000483414 SPRR4Q96PI1 79 aa5.85□□□□□ -1.47
LIMK1-205ENST00000483414 PCLOQ9Y6V0 5065 aa5.85□□□□□ -1.47
LIMK1-205ENST00000483414 PSORS1C2Q9UIG4 136 aa5.84□□□□□ -1.47
LIMK1-205ENST00000483414 ATP5EP56381 51 aaPredicted RBP5.84□□□□□ -1.47
LIMK1-205ENST00000483414 A0A1B0GW54 56 aa5.83□□□□□ -1.48
LIMK1-205ENST00000483414 CASC2Q6XLA1 102 aa5.82□□□□□ -1.48
LIMK1-205ENST00000483414 NDUFS5O43920 106 aa5.81□□□□□ -1.48
LIMK1-205ENST00000483414 KRTAP4-5Q9BYR2 181 aa5.81□□□□□ -1.48
LIMK1-205ENST00000483414 CHKB-CPT1BH3BT56 60 aa5.8□□□□□ -1.48
LIMK1-205ENST00000483414 Q8N1X5 172 aa5.8□□□□□ -1.48
LIMK1-205ENST00000483414 SMR3BP02814 79 aaPredicted RBP5.8□□□□□ -1.48
LIMK1-205ENST00000483414 NDUFB1O75438 58 aa5.79□□□□□ -1.48
LIMK1-205ENST00000483414 ANAPC11Q9NYG5 84 aa5.79□□□□□ -1.48
LIMK1-205ENST00000483414 H0Y9P7 68 aa5.78□□□□□ -1.48
LIMK1-205ENST00000483414 PRR15LQ9BU68 103 aa5.78□□□□□ -1.48
LIMK1-205ENST00000483414 IGLV7-43P04211 117 aa5.78□□□□□ -1.48
LIMK1-205ENST00000483414 PRR15Q8IV56 129 aa5.77□□□□□ -1.49
LIMK1-205ENST00000483414 Q5VSD8 79 aa5.76□□□□□ -1.49
LIMK1-205ENST00000483414 SPINK6Q6UWN8 80 aa5.76□□□□□ -1.49
LIMK1-205ENST00000483414 PCOTHQ58A44 107 aa5.76□□□□□ -1.49
LIMK1-205ENST00000483414 Q5VV11 94 aa5.75□□□□□ -1.49
LIMK1-205ENST00000483414 KRTAP1-4P0C5Y4 121 aa5.75□□□□□ -1.49
LIMK1-205ENST00000483414 IGHV6-1A0A0B4J1U7 121 aa5.75□□□□□ -1.49
LIMK1-205ENST00000483414 ZNF861PO60384 105 aa5.75□□□□□ -1.49
LIMK1-205ENST00000483414 LCE2DQ5TA82 110 aaPredicted RBP5.75□□□□□ -1.49
LIMK1-205ENST00000483414 Q1T7F1 81 aa5.74□□□□□ -1.49
LIMK1-205ENST00000483414 A8MWP4 228 aa5.73□□□□□ -1.49
LIMK1-205ENST00000483414 ZCCHC13Q8WW36 166 aaKnown RBP5.73□□□□□ -1.49
LIMK1-205ENST00000483414 MOBPQ13875 183 aa5.73□□□□□ -1.49
LIMK1-205ENST00000483414 A6NED7 52 aa5.72□□□□□ -1.49
LIMK1-205ENST00000483414 LINC00483Q53H64 154 aa5.72□□□□□ -1.49
LIMK1-205ENST00000483414 IGLV8-61A0A075B6I0 122 aa5.7□□□□□ -1.5
LIMK1-205ENST00000483414 LCA10Q71F78 164 aa5.7□□□□□ -1.5
LIMK1-205ENST00000483414 PLA2G1BP04054 148 aaKnown RBP5.69□□□□□ -1.5
LIMK1-205ENST00000483414 SPRR1BP22528 89 aa5.69□□□□□ -1.5
LIMK1-205ENST00000483414 SPAG11AQ6PDA7 123 aa5.69□□□□□ -1.5
LIMK1-205ENST00000483414 LINC00472Q9H8W2 130 aa5.69□□□□□ -1.5
LIMK1-205ENST00000483414 RBM12B-AS1Q9P1G2 102 aa5.69□□□□□ -1.5
LIMK1-205ENST00000483414 FAM229AH3BQW9 127 aa5.68□□□□□ -1.5
LIMK1-205ENST00000483414 Q8N9P0 234 aaPredicted RBP5.68□□□□□ -1.5
LIMK1-205ENST00000483414 KRTAP29-1A8MX34 341 aaPredicted RBP5.66□□□□□ -1.5
LIMK1-205ENST00000483414 A0A087X002 238 aa5.65□□□□□ -1.51
LIMK1-205ENST00000483414 MT1HL1P0DM35 61 aa5.64□□□□□ -1.51
LIMK1-205ENST00000483414 KRTAP13-2Q52LG2 175 aa5.64□□□□□ -1.51
LIMK1-205ENST00000483414 MMP24-AS1A0A0U1RRL7 71 aa5.64□□□□□ -1.51
LIMK1-205ENST00000483414 RETNLBQ9BQ08 111 aa5.64□□□□□ -1.51
LIMK1-205ENST00000483414 FLG2Q5D862 2391 aaPredicted RBP5.64□□□□□ -1.51
LIMK1-205ENST00000483414 ZNF706Q9Y5V0 76 aaPredicted RBP5.64□□□□□ -1.51
LIMK1-205ENST00000483414 COA5Q86WW8 74 aa5.63□□□□□ -1.51
LIMK1-205ENST00000483414 PRAC1Q96KF2 57 aa5.63□□□□□ -1.51
LIMK1-205ENST00000483414 CYP4F30PQ9H0H9 118 aa5.63□□□□□ -1.51
LIMK1-205ENST00000483414 C8orf17Q9NRJ1 99 aa5.63□□□□□ -1.51
LIMK1-205ENST00000483414 CD164Q04900 197 aa5.62□□□□□ -1.51
LIMK1-205ENST00000483414 KRTAP3-3Q9BYR6 98 aa5.62□□□□□ -1.51
LIMK1-205ENST00000483414 KRTAP3-2Q9BYR7 98 aa5.62□□□□□ -1.51
LIMK1-205ENST00000483414 KRTAP10-8P60410 259 aa5.62□□□□□ -1.51
LIMK1-205ENST00000483414 SPINK7P58062 85 aa5.61□□□□□ -1.51
LIMK1-205ENST00000483414 KTN1-AS1Q86SY8 53 aa5.61□□□□□ -1.51
LIMK1-205ENST00000483414 HERC1Q15751 4861 aa5.61□□□□□ -1.51
LIMK1-205ENST00000483414 ADM2Q7Z4H4 148 aa5.6□□□□□ -1.51
LIMK1-205ENST00000483414 DMBT1Q9UGM3 2413 aaPredicted RBP5.6□□□□□ -1.51
LIMK1-205ENST00000483414 NOTCH2NLQ7Z3S9 236 aa5.59□□□□□ -1.51
LIMK1-205ENST00000483414 A0A1B0GVX0 72 aa5.59□□□□□ -1.51
LIMK1-205ENST00000483414 H3BPC8 53 aa5.59□□□□□ -1.51
LIMK1-205ENST00000483414 MRPL34Q9BQ48 92 aaKnown RBP5.58□□□□□ -1.52
LIMK1-205ENST00000483414 TP53AIP1Q9HCN2 124 aa5.57□□□□□ -1.52
LIMK1-205ENST00000483414 PRR26Q8N8Z3 221 aa5.56□□□□□ -1.52
LIMK1-205ENST00000483414 Q96NJ1 140 aa5.56□□□□□ -1.52
LIMK1-205ENST00000483414 LIMD2Q9BT23 127 aa5.55□□□□□ -1.52
LIMK1-205ENST00000483414 SPANXA2-OT1Q8N9U9 137 aa5.55□□□□□ -1.52
LIMK1-205ENST00000483414 A6NN06 94 aa5.54□□□□□ -1.52
LIMK1-205ENST00000483414 HMCN2Q8NDA2 5059 aa5.54□□□□□ -1.52
LIMK1-205ENST00000483414 IGLV7-46A0A075B6I9 117 aa5.52□□□□□ -1.53
LIMK1-205ENST00000483414 LOC101927531A0A1B0GV80 90 aa5.52□□□□□ -1.53
LIMK1-205ENST00000483414 Q75L30 129 aa5.51□□□□□ -1.53
LIMK1-205ENST00000483414 ATP11AUNQ6ZP68 121 aa5.51□□□□□ -1.53
LIMK1-205ENST00000483414 LPAP08519 4548 aa5.49□□□□□ -1.53
LIMK1-205ENST00000483414 HRES1P13985 223 aa5.49□□□□□ -1.53
LIMK1-205ENST00000483414 LINC00313P59037 77 aa5.49□□□□□ -1.53
LIMK1-205ENST00000483414 Q5W150 140 aa5.49□□□□□ -1.53
LIMK1-205ENST00000483414 SSBP3-AS1Q7Z2R9 100 aa5.49□□□□□ -1.53
LIMK1-205ENST00000483414 CDC42SE1Q9NRR8 79 aa5.49□□□□□ -1.53
LIMK1-205ENST00000483414 RPS29P62273 56 aaKnown RBP5.47□□□□□ -1.53
LIMK1-205ENST00000483414 C7orf65Q6ZTY9 151 aa5.47□□□□□ -1.53
LIMK1-205ENST00000483414 TYMSOSQ8TAI1 123 aa5.47□□□□□ -1.53
LIMK1-205ENST00000483414 IGKV2D-30A0A075B6S6 120 aa5.46□□□□□ -1.54
LIMK1-205ENST00000483414 IGKV2-30P06310 120 aa5.46□□□□□ -1.54
LIMK1-205ENST00000483414 C8orf87E5RJ46 101 aa5.44□□□□□ -1.54
LIMK1-205ENST00000483414 LINC00304Q8N9R0 145 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms