RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 C4orf26Q17RF5 130 aa8.82□□□□□ -1
PHGDH-205ENST00000482968 HRCT1Q6UXD1 115 aa8.8□□□□□ -1
PHGDH-205ENST00000482968 SNURFQ9Y675 71 aa8.8□□□□□ -1
PHGDH-205ENST00000482968 TMEM254Q8TBM7 123 aa8.79□□□□□ -1
PHGDH-205ENST00000482968 LRP1Q07954 4544 aaKnown RBP8.78□□□□□ -1
PHGDH-205ENST00000482968 A0A1W2PNM2 257 aa8.78□□□□□ -1
PHGDH-205ENST00000482968 IGKV4-1P06312 121 aa8.75□□□□□ -1.01
PHGDH-205ENST00000482968 KRTAP10-8P60410 259 aa8.75□□□□□ -1.01
PHGDH-205ENST00000482968 C4orf48Q5BLP8 95 aa8.73□□□□□ -1.01
PHGDH-205ENST00000482968 PRO0628Q9UI54 55 aa8.73□□□□□ -1.01
PHGDH-205ENST00000482968 MYCBP2O75592 4640 aa8.72□□□□□ -1.01
PHGDH-205ENST00000482968 LINC00304Q8N9R0 145 aa8.72□□□□□ -1.01
PHGDH-205ENST00000482968 OCR1Q9BZK8 76 aa8.72□□□□□ -1.01
PHGDH-205ENST00000482968 ABCA13Q86UQ4 5058 aa8.72□□□□□ -1.01
PHGDH-205ENST00000482968 FAT3Q8TDW7 4589 aa8.72□□□□□ -1.01
PHGDH-205ENST00000482968 A0A0U1RQV1 116 aa8.71□□□□□ -1.02
PHGDH-205ENST00000482968 CD164Q04900 197 aa8.71□□□□□ -1.02
PHGDH-205ENST00000482968 MT1HL1P0DM35 61 aa8.7□□□□□ -1.02
PHGDH-205ENST00000482968 A0A087WSZ3 146 aa8.69□□□□□ -1.02
PHGDH-205ENST00000482968 LCE2BO14633 110 aa8.68□□□□□ -1.02
PHGDH-205ENST00000482968 KRTAP29-1A8MX34 341 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-205ENST00000482968 SPAG11AQ6PDA7 123 aa8.68□□□□□ -1.02
PHGDH-205ENST00000482968 TNXBP22105 4242 aa8.67□□□□□ -1.02
PHGDH-205ENST00000482968 SPINK1P00995 79 aa8.67□□□□□ -1.02
PHGDH-205ENST00000482968 FP248Q71RG6 208 aaPredicted RBP8.64□□□□□ -1.03
PHGDH-205ENST00000482968 Q8N9L7 120 aa8.63□□□□□ -1.03
PHGDH-205ENST00000482968 DMBT1Q9UGM3 2413 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-205ENST00000482968 J3QL48 77 aa8.61□□□□□ -1.03
PHGDH-205ENST00000482968 LIMD2Q9BT23 127 aa8.61□□□□□ -1.03
PHGDH-205ENST00000482968 NDUFB1O75438 58 aa8.6□□□□□ -1.03
PHGDH-205ENST00000482968 RPS29P62273 56 aaKnown RBP8.59□□□□□ -1.03
PHGDH-205ENST00000482968 DEFB116Q30KQ4 102 aa8.57□□□□□ -1.04
PHGDH-205ENST00000482968 PCLOQ9Y6V0 5065 aa8.56□□□□□ -1.04
PHGDH-205ENST00000482968 ASB16-AS1Q495Z4 193 aa8.55□□□□□ -1.04
PHGDH-205ENST00000482968 HCG22E2RYF7 251 aa8.54□□□□□ -1.04
PHGDH-205ENST00000482968 Q96NJ1 140 aa8.54□□□□□ -1.04
PHGDH-205ENST00000482968 LINC00472Q9H8W2 130 aa8.54□□□□□ -1.04
PHGDH-205ENST00000482968 C1orf195Q5TG92 126 aa8.53□□□□□ -1.04
PHGDH-205ENST00000482968 MP68P56378 58 aa8.53□□□□□ -1.04
PHGDH-205ENST00000482968 RETNLBQ9BQ08 111 aa8.53□□□□□ -1.04
PHGDH-205ENST00000482968 hDV103S1A0JD37 113 aa8.51□□□□□ -1.05
PHGDH-205ENST00000482968 DSCR10P59022 87 aa8.51□□□□□ -1.05
PHGDH-205ENST00000482968 BRK1Q8WUW1 75 aa8.51□□□□□ -1.05
PHGDH-205ENST00000482968 MPLKIPQ8TAP9 179 aa8.5□□□□□ -1.05
PHGDH-205ENST00000482968 ZCCHC13Q8WW36 166 aaKnown RBP8.5□□□□□ -1.05
PHGDH-205ENST00000482968 V9GYY9 64 aa8.5□□□□□ -1.05
PHGDH-205ENST00000482968 H3BPC8 53 aa8.5□□□□□ -1.05
PHGDH-205ENST00000482968 CYP4F30PQ9H0H9 118 aa8.5□□□□□ -1.05
PHGDH-205ENST00000482968 Q1T7F1 81 aa8.48□□□□□ -1.05
PHGDH-205ENST00000482968 K7EQZ3 153 aa8.48□□□□□ -1.05
PHGDH-205ENST00000482968 C1orf64Q8NEQ6 169 aa8.44□□□□□ -1.06
PHGDH-205ENST00000482968 SPANXA2-OT1Q8N9U9 137 aa8.42□□□□□ -1.06
PHGDH-205ENST00000482968 A8MWP4 228 aa8.4□□□□□ -1.06
PHGDH-205ENST00000482968 SEC61GP60059 68 aa8.4□□□□□ -1.06
PHGDH-205ENST00000482968 PRR4Q16378 134 aa8.4□□□□□ -1.07
PHGDH-205ENST00000482968 TRAV22A0A0B4J277 110 aa8.38□□□□□ -1.07
PHGDH-205ENST00000482968 IGHV6-1A0A0B4J1U7 121 aa8.38□□□□□ -1.07
PHGDH-205ENST00000482968 PRR15Q8IV56 129 aa8.38□□□□□ -1.07
PHGDH-205ENST00000482968 IGLV7-46A0A075B6I9 117 aa8.37□□□□□ -1.07
PHGDH-205ENST00000482968 A0A1B0GVX0 72 aa8.36□□□□□ -1.07
PHGDH-205ENST00000482968 CASC2Q6XLA1 102 aa8.36□□□□□ -1.07
PHGDH-205ENST00000482968 WFDC13Q8IUB5 93 aa8.35□□□□□ -1.07
PHGDH-205ENST00000482968 LINC00208Q96KT6 92 aa8.34□□□□□ -1.07
PHGDH-205ENST00000482968 H0Y9P7 68 aa8.33□□□□□ -1.08
PHGDH-205ENST00000482968 NOTCH2NLQ7Z3S9 236 aa8.33□□□□□ -1.08
PHGDH-205ENST00000482968 C9orf92A6NGG3 77 aa8.32□□□□□ -1.08
PHGDH-205ENST00000482968 LINC00313P59037 77 aa8.31□□□□□ -1.08
PHGDH-205ENST00000482968 C8orf17Q9NRJ1 99 aa8.3□□□□□ -1.08
PHGDH-205ENST00000482968 LCE2AQ5TA79 106 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-205ENST00000482968 TP53AIP1Q9HCN2 124 aa8.29□□□□□ -1.08
PHGDH-205ENST00000482968 C8orf87E5RJ46 101 aa8.27□□□□□ -1.08
PHGDH-205ENST00000482968 HERC1Q15751 4861 aa8.27□□□□□ -1.09
PHGDH-205ENST00000482968 MMP24-AS1A0A0U1RRL7 71 aa8.27□□□□□ -1.09
PHGDH-205ENST00000482968 KRTAP13-3Q3SY46 172 aa8.26□□□□□ -1.09
PHGDH-205ENST00000482968 PSPHP1O15172 72 aa8.25□□□□□ -1.09
PHGDH-205ENST00000482968 TPRXLQ17RH7 258 aa8.22□□□□□ -1.09
PHGDH-205ENST00000482968 KRTAP16-1A8MUX0 517 aa8.21□□□□□ -1.1
PHGDH-205ENST00000482968 PMAIP1Q13794 54 aa8.2□□□□□ -1.1
PHGDH-205ENST00000482968 LPAP08519 4548 aa8.19□□□□□ -1.1
PHGDH-205ENST00000482968 MRPL34Q9BQ48 92 aaKnown RBP8.19□□□□□ -1.1
PHGDH-205ENST00000482968 A8MUN3 132 aa8.18□□□□□ -1.1
PHGDH-205ENST00000482968 Q8N9P0 234 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-205ENST00000482968 XP32Q5T750 250 aa8.17□□□□□ -1.1
PHGDH-205ENST00000482968 CHKB-CPT1BH3BT56 60 aa8.15□□□□□ -1.1
PHGDH-205ENST00000482968 NDUFS5O43920 106 aa8.15□□□□□ -1.1
PHGDH-205ENST00000482968 Q5VV11 94 aa8.15□□□□□ -1.1
PHGDH-205ENST00000482968 COA5Q86WW8 74 aa8.14□□□□□ -1.11
PHGDH-205ENST00000482968 Q75L30 129 aa8.13□□□□□ -1.11
PHGDH-205ENST00000482968 PRR15LQ9BU68 103 aa8.13□□□□□ -1.11
PHGDH-205ENST00000482968 LOC101927531A0A1B0GV80 90 aa8.12□□□□□ -1.11
PHGDH-205ENST00000482968 C20orf166-AS1Q96NR2 134 aa8.12□□□□□ -1.11
PHGDH-205ENST00000482968 A8MUU9 505 aa8.11□□□□□ -1.11
PHGDH-205ENST00000482968 HMCN2Q8NDA2 5059 aa8.09□□□□□ -1.11
PHGDH-205ENST00000482968 ATP11AUNQ6ZP68 121 aa8.09□□□□□ -1.11
PHGDH-205ENST00000482968 RPL37P61927 97 aaKnown RBP8.07□□□□□ -1.12
PHGDH-205ENST00000482968 LRP2P98164 4655 aa8.07□□□□□ -1.12
PHGDH-205ENST00000482968 A6NED7 52 aa8.06□□□□□ -1.12
PHGDH-205ENST00000482968 LINC01558Q9Y6Z2 57 aa8.05□□□□□ -1.12
PHGDH-205ENST00000482968 PCOTHQ58A44 107 aa8.03□□□□□ -1.12
PHGDH-205ENST00000482968 Q5W150 140 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms