RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 KRTAP2-1Q9BYU5 128 aa0.73□□□□□ -2.29
CLCC1-209ENST00000482889 NMES1Q9C002 83 aa0.73□□□□□ -2.29
CLCC1-209ENST00000482889 CEP295Q9C0D2 2601 aa0.73□□□□□ -2.29
CLCC1-209ENST00000482889 OTOGQ6ZRI0 2925 aa0.73□□□□□ -2.29
CLCC1-209ENST00000482889 USP9YO00507 2555 aaPredicted RBP0.73□□□□□ -2.29
CLCC1-209ENST00000482889 PRRC2CQ9Y520 2896 aaKnown RBP0.73□□□□□ -2.29
CLCC1-209ENST00000482889 NBPF19A0A087WUL8 3843 aa0.73□□□□□ -2.29
CLCC1-209ENST00000482889 SPTAN1Q13813 2472 aaKnown RBP0.73□□□□□ -2.29
CLCC1-209ENST00000482889 UTP20O75691 2785 aaKnown RBP0.73□□□□□ -2.29
CLCC1-209ENST00000482889 TPRP12270 2363 aaKnown RBP0.72□□□□□ -2.29
CLCC1-209ENST00000482889 LRRK2Q5S007 2527 aa0.72□□□□□ -2.29
CLCC1-209ENST00000482889 CLTCL1P53675 1640 aa0.72□□□□□ -2.29
CLCC1-209ENST00000482889 SPENQ96T58 3664 aaKnown RBP0.72□□□□□ -2.29
CLCC1-209ENST00000482889 MGAQ8IWI9 3026 aa0.72□□□□□ -2.29
CLCC1-209ENST00000482889 CNOT1A5YKK6 2376 aaKnown RBP0.72□□□□□ -2.29
CLCC1-209ENST00000482889 BIRC6Q9NR09 4857 aa0.72□□□□□ -2.29
CLCC1-209ENST00000482889 EPPK1P58107 5090 aaKnown RBP0.72□□□□□ -2.29
CLCC1-209ENST00000482889 LAMA5O15230 3695 aa0.71□□□□□ -2.3
CLCC1-209ENST00000482889 FLNAP21333 2647 aaKnown RBP0.71□□□□□ -2.3
CLCC1-209ENST00000482889 LAMA1P25391 3075 aa0.71□□□□□ -2.3
CLCC1-209ENST00000482889 AKAP13Q12802 2813 aa0.71□□□□□ -2.3
CLCC1-209ENST00000482889 ADGRG4Q8IZF6 3080 aa0.71□□□□□ -2.3
CLCC1-209ENST00000482889 AHNAK2Q8IVF2 5795 aa0.71□□□□□ -2.3
CLCC1-209ENST00000482889 DMXL2Q8TDJ6 3036 aa0.71□□□□□ -2.3
CLCC1-209ENST00000482889 GVINP1Q7Z2Y8 2422 aa0.7□□□□□ -2.3
CLCC1-209ENST00000482889 TOP2AP11388 1531 aaKnown RBP0.7□□□□□ -2.3
CLCC1-209ENST00000482889 C4AP0C0L4 1744 aa0.7□□□□□ -2.3
CLCC1-209ENST00000482889 C4BP0C0L5 1744 aa0.7□□□□□ -2.3
CLCC1-209ENST00000482889 MUC2Q02817 5179 aa0.7□□□□□ -2.3
CLCC1-209ENST00000482889 ATMQ13315 3056 aa0.7□□□□□ -2.3
CLCC1-209ENST00000482889 CUBNO60494 3623 aa0.7□□□□□ -2.3
CLCC1-209ENST00000482889 CEP250Q9BV73 2442 aa0.7□□□□□ -2.3
CLCC1-209ENST00000482889 DCHS2Q6V1P9 2916 aa0.7□□□□□ -2.3
CLCC1-209ENST00000482889 CENPEQ02224 2701 aa0.7□□□□□ -2.3
CLCC1-209ENST00000482889 CSMD2Q7Z408 3487 aa0.7□□□□□ -2.3
CLCC1-209ENST00000482889 ZANQ9Y493 2812 aa0.7□□□□□ -2.3
CLCC1-209ENST00000482889 ITPR2Q14571 2701 aa0.69□□□□□ -2.3
CLCC1-209ENST00000482889 NSD1Q96L73 2696 aaPredicted RBP0.69□□□□□ -2.3
CLCC1-209ENST00000482889 KIAA1109Q2LD37 5005 aa0.69□□□□□ -2.3
CLCC1-209ENST00000482889 IGIPA6NJ69 53 aa0.69□□□□□ -2.3
CLCC1-209ENST00000482889 PRH1P02810 166 aa0.69□□□□□ -2.3
CLCC1-209ENST00000482889 IQGAP2Q13576 1575 aa0.69□□□□□ -2.3
CLCC1-209ENST00000482889 KIF1AQ12756 1690 aa0.69□□□□□ -2.3
CLCC1-209ENST00000482889 SPTA1P02549 2419 aa0.68□□□□□ -2.3
CLCC1-209ENST00000482889 MTORP42345 2549 aa0.68□□□□□ -2.3
CLCC1-209ENST00000482889 SPINK1P00995 79 aa0.68□□□□□ -2.3
CLCC1-209ENST00000482889 DEFB130BP0DP73 79 aa0.68□□□□□ -2.3
CLCC1-209ENST00000482889 DEFB130AP0DP74 79 aa0.68□□□□□ -2.3
CLCC1-209ENST00000482889 IAPPP10997 89 aa0.68□□□□□ -2.3
CLCC1-209ENST00000482889 PCNX1Q96RV3 2341 aa0.68□□□□□ -2.3
CLCC1-209ENST00000482889 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
CLCC1-209ENST00000482889 CSMD3Q7Z407 3707 aa0.68□□□□□ -2.3
CLCC1-209ENST00000482889 SYCP2Q9BX26 1530 aa0.68□□□□□ -2.3
CLCC1-209ENST00000482889 ANKHD1Q8IWZ3 2542 aaKnown RBP0.68□□□□□ -2.3
CLCC1-209ENST00000482889 RYR2Q92736 4967 aa0.68□□□□□ -2.3
CLCC1-209ENST00000482889 TENM2Q9NT68 2774 aa0.68□□□□□ -2.3
CLCC1-209ENST00000482889 MXRA5Q9NR99 2828 aa0.67□□□□□ -2.3
CLCC1-209ENST00000482889 HERC2O95714 4834 aa0.67□□□□□ -2.3
CLCC1-209ENST00000482889 SERF2P84101 59 aa0.67□□□□□ -2.3
CLCC1-209ENST00000482889 MINOS1Q5TGZ0 78 aa0.67□□□□□ -2.3
CLCC1-209ENST00000482889 KRTAP5-10Q6L8G5 202 aa0.67□□□□□ -2.3
CLCC1-209ENST00000482889 SMR3AQ99954 134 aa0.67□□□□□ -2.3
CLCC1-209ENST00000482889 IGF2RP11717 2491 aa0.67□□□□□ -2.3
CLCC1-209ENST00000482889 HIVEP1P15822 2718 aa0.67□□□□□ -2.3
CLCC1-209ENST00000482889 TLN2Q9Y4G6 2542 aa0.67□□□□□ -2.3
CLCC1-209ENST00000482889 TRPM2O94759 1503 aa0.66□□□□□ -2.3
CLCC1-209ENST00000482889 SNRPGP15A8MWD9 76 aa0.66□□□□□ -2.3
CLCC1-209ENST00000482889 LYNX1G3V0Z9 82 aa0.66□□□□□ -2.3
CLCC1-209ENST00000482889 HERC1Q15751 4861 aa0.66□□□□□ -2.3
CLCC1-209ENST00000482889 AKAP6Q13023 2319 aa0.66□□□□□ -2.3
CLCC1-209ENST00000482889 LY75O60449 1722 aa0.66□□□□□ -2.3
CLCC1-209ENST00000482889 FAM186AA6NE01 2351 aa0.65□□□□□ -2.3
CLCC1-209ENST00000482889 BSNQ9UPA5 3926 aa0.65□□□□□ -2.3
CLCC1-209ENST00000482889 MAP1AP78559 2803 aaPredicted RBP0.65□□□□□ -2.31
CLCC1-209ENST00000482889 RIF1Q5UIP0 2472 aaKnown RBP0.65□□□□□ -2.31
CLCC1-209ENST00000482889 LMO7Q8WWI1 1683 aa0.65□□□□□ -2.31
CLCC1-209ENST00000482889 EP300Q09472 2414 aaPredicted RBP0.65□□□□□ -2.31
CLCC1-209ENST00000482889 VPS13CQ709C8 3753 aa0.65□□□□□ -2.31
CLCC1-209ENST00000482889 TENM3Q9P273 2699 aa0.64□□□□□ -2.31
CLCC1-209ENST00000482889 AKAP9Q99996 3911 aa0.64□□□□□ -2.31
CLCC1-209ENST00000482889 TACC2O95359 2948 aa0.64□□□□□ -2.31
CLCC1-209ENST00000482889 PKDREJQ9NTG1 2253 aa0.64□□□□□ -2.31
CLCC1-209ENST00000482889 ABCA13Q86UQ4 5058 aa0.64□□□□□ -2.31
CLCC1-209ENST00000482889 HIVEP3Q5T1R4 2406 aa0.64□□□□□ -2.31
CLCC1-209ENST00000482889 CREBBPQ92793 2442 aa0.64□□□□□ -2.31
CLCC1-209ENST00000482889 TOGARAM1Q9Y4F4 1720 aa0.64□□□□□ -2.31
CLCC1-209ENST00000482889 TIMM8BQ9Y5J9 83 aaPredicted RBP0.63□□□□□ -2.31
CLCC1-209ENST00000482889 SVEP1Q4LDE5 3571 aa0.62□□□□□ -2.31
CLCC1-209ENST00000482889 ALMS1Q8TCU4 4167 aa0.62□□□□□ -2.31
CLCC1-209ENST00000482889 PLNP26678 52 aa0.62□□□□□ -2.31
CLCC1-209ENST00000482889 C6orf48Q9UBA6 75 aa0.62□□□□□ -2.31
CLCC1-209ENST00000482889 U3KQA8 63 aa0.62□□□□□ -2.31
CLCC1-209ENST00000482889 MGAM2Q2M2H8 2515 aa0.62□□□□□ -2.31
CLCC1-209ENST00000482889 FAT4Q6V0I7 4981 aa0.62□□□□□ -2.31
CLCC1-209ENST00000482889 KNL1Q8NG31 2342 aa0.61□□□□□ -2.31
CLCC1-209ENST00000482889 CDC42BPAQ5VT25 1732 aa0.61□□□□□ -2.31
CLCC1-209ENST00000482889 COL7A1Q02388 2944 aa0.61□□□□□ -2.31
CLCC1-209ENST00000482889 LINC00308Q8TCZ7 52 aa0.61□□□□□ -2.31
CLCC1-209ENST00000482889 DDX60Q8IY21 1712 aaKnown RBP0.61□□□□□ -2.31
CLCC1-209ENST00000482889 RPS27P42677 84 aaKnown RBP0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms