RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 A0A087X002 238 aa9.22□□□□□ -0.93
RXRA-202ENST00000481739 hDV103S1A0JD37 113 aa9.22□□□□□ -0.93
RXRA-202ENST00000481739 PLA2G1BP04054 148 aaKnown RBP9.22□□□□□ -0.93
RXRA-202ENST00000481739 KRTAP1-4P0C5Y4 121 aa9.22□□□□□ -0.93
RXRA-202ENST00000481739 FAM236DA0A1B0GTK5 79 aa9.21□□□□□ -0.93
RXRA-202ENST00000481739 FAM236CP0DP71 79 aa9.21□□□□□ -0.93
RXRA-202ENST00000481739 KRTAP13-2Q52LG2 175 aa9.21□□□□□ -0.94
RXRA-202ENST00000481739 KRTAP10-4P60372 401 aaPredicted RBP9.2□□□□□ -0.94
RXRA-202ENST00000481739 C8orf17Q9NRJ1 99 aa9.2□□□□□ -0.94
RXRA-202ENST00000481739 H3BPC8 53 aa9.19□□□□□ -0.94
RXRA-202ENST00000481739 MP68P56378 58 aa9.19□□□□□ -0.94
RXRA-202ENST00000481739 Q5VSD8 79 aa9.18□□□□□ -0.94
RXRA-202ENST00000481739 TP53AIP1Q9HCN2 124 aa9.18□□□□□ -0.94
RXRA-202ENST00000481739 KIAA1109Q2LD37 5005 aa9.18□□□□□ -0.94
RXRA-202ENST00000481739 ZCCHC13Q8WW36 166 aaKnown RBP9.17□□□□□ -0.94
RXRA-202ENST00000481739 LIMD2Q9BT23 127 aa9.17□□□□□ -0.94
RXRA-202ENST00000481739 IGHV6-1A0A0B4J1U7 121 aa9.16□□□□□ -0.94
RXRA-202ENST00000481739 PKHD1L1Q86WI1 4243 aa9.14□□□□□ -0.95
RXRA-202ENST00000481739 C8orf87E5RJ46 101 aa9.13□□□□□ -0.95
RXRA-202ENST00000481739 C4orf48Q5BLP8 95 aa9.12□□□□□ -0.95
RXRA-202ENST00000481739 TYMSOSQ8TAI1 123 aa9.11□□□□□ -0.95
RXRA-202ENST00000481739 MRPL34Q9BQ48 92 aaKnown RBP9.11□□□□□ -0.95
RXRA-202ENST00000481739 TRAV22A0A0B4J277 110 aa9.1□□□□□ -0.95
RXRA-202ENST00000481739 H0Y9P7 68 aa9.1□□□□□ -0.95
RXRA-202ENST00000481739 SPINK1P00995 79 aa9.1□□□□□ -0.95
RXRA-202ENST00000481739 SERP1Q9Y6X1 66 aa9.1□□□□□ -0.95
RXRA-202ENST00000481739 RPS29P62273 56 aaKnown RBP9.08□□□□□ -0.96
RXRA-202ENST00000481739 Q8N1X5 172 aa9.08□□□□□ -0.96
RXRA-202ENST00000481739 C1orf195Q5TG92 126 aa9.07□□□□□ -0.96
RXRA-202ENST00000481739 PRR26Q8N8Z3 221 aa9.07□□□□□ -0.96
RXRA-202ENST00000481739 KRTAP17-1Q9BYP8 105 aa9.07□□□□□ -0.96
RXRA-202ENST00000481739 SPAG11AQ6PDA7 123 aa9.06□□□□□ -0.96
RXRA-202ENST00000481739 LINC00208Q96KT6 92 aa9.06□□□□□ -0.96
RXRA-202ENST00000481739 NDUFS5O43920 106 aa9.03□□□□□ -0.96
RXRA-202ENST00000481739 C1orf64Q8NEQ6 169 aa9.02□□□□□ -0.97
RXRA-202ENST00000481739 NOTCH2NLQ7Z3S9 236 aa9.01□□□□□ -0.97
RXRA-202ENST00000481739 LINC00304Q8N9R0 145 aa9.01□□□□□ -0.97
RXRA-202ENST00000481739 LINC00313P59037 77 aa9.01□□□□□ -0.97
RXRA-202ENST00000481739 SPANXA2-OT1Q8N9U9 137 aa8.99□□□□□ -0.97
RXRA-202ENST00000481739 BIRC6Q9NR09 4857 aa8.98□□□□□ -0.97
RXRA-202ENST00000481739 CYP4F30PQ9H0H9 118 aa8.97□□□□□ -0.97
RXRA-202ENST00000481739 OXTP01178 125 aa8.96□□□□□ -0.98
RXRA-202ENST00000481739 Q8N9P0 234 aaPredicted RBP8.94□□□□□ -0.98
RXRA-202ENST00000481739 LOC101927531A0A1B0GV80 90 aa8.92□□□□□ -0.98
RXRA-202ENST00000481739 LRP1Q07954 4544 aaKnown RBP8.92□□□□□ -0.98
RXRA-202ENST00000481739 FAT3Q8TDW7 4589 aa8.91□□□□□ -0.98
RXRA-202ENST00000481739 FLG2Q5D862 2391 aaPredicted RBP8.91□□□□□ -0.98
RXRA-202ENST00000481739 SMIM26A0A096LP01 95 aa8.9□□□□□ -0.98
RXRA-202ENST00000481739 KRTAP4-5Q9BYR2 181 aa8.89□□□□□ -0.99
RXRA-202ENST00000481739 KRTAP13-3Q3SY46 172 aa8.88□□□□□ -0.99
RXRA-202ENST00000481739 KRTAP16-1A8MUX0 517 aa8.87□□□□□ -0.99
RXRA-202ENST00000481739 TNXBP22105 4242 aa8.87□□□□□ -0.99
RXRA-202ENST00000481739 IGLV7-46A0A075B6I9 117 aa8.86□□□□□ -0.99
RXRA-202ENST00000481739 KRTAP10-8P60410 259 aa8.86□□□□□ -0.99
RXRA-202ENST00000481739 HERC2O95714 4834 aa8.85□□□□□ -0.99
RXRA-202ENST00000481739 MYCBP2O75592 4640 aa8.84□□□□□ -0.99
RXRA-202ENST00000481739 Q5W150 140 aa8.83□□□□□ -1
RXRA-202ENST00000481739 PRR4Q16378 134 aa8.8□□□□□ -1
RXRA-202ENST00000481739 PCOTHQ58A44 107 aa8.8□□□□□ -1
RXRA-202ENST00000481739 ABCA13Q86UQ4 5058 aa8.8□□□□□ -1
RXRA-202ENST00000481739 MT1HL1P0DM35 61 aa8.75□□□□□ -1.01
RXRA-202ENST00000481739 FP248Q71RG6 208 aaPredicted RBP8.75□□□□□ -1.01
RXRA-202ENST00000481739 IGKV2-30P06310 120 aa8.73□□□□□ -1.01
RXRA-202ENST00000481739 DMBT1Q9UGM3 2413 aaPredicted RBP8.71□□□□□ -1.01
RXRA-202ENST00000481739 RETNLBQ9BQ08 111 aa8.71□□□□□ -1.01
RXRA-202ENST00000481739 COA5Q86WW8 74 aa8.67□□□□□ -1.02
RXRA-202ENST00000481739 C20orf166-AS1Q96NR2 134 aa8.67□□□□□ -1.02
RXRA-202ENST00000481739 C4orf26Q17RF5 130 aa8.66□□□□□ -1.02
RXRA-202ENST00000481739 V9GYY9 64 aa8.66□□□□□ -1.02
RXRA-202ENST00000481739 J3QL48 77 aa8.66□□□□□ -1.02
RXRA-202ENST00000481739 Q1T7F1 81 aa8.66□□□□□ -1.02
RXRA-202ENST00000481739 A8MUU9 505 aa8.65□□□□□ -1.02
RXRA-202ENST00000481739 HRES1P13985 223 aa8.64□□□□□ -1.03
RXRA-202ENST00000481739 MPLKIPQ8TAP9 179 aa8.62□□□□□ -1.03
RXRA-202ENST00000481739 ACYP2P14621 99 aa8.61□□□□□ -1.03
RXRA-202ENST00000481739 C7orf65Q6ZTY9 151 aa8.61□□□□□ -1.03
RXRA-202ENST00000481739 DMAC1Q96GE9 116 aa8.61□□□□□ -1.03
RXRA-202ENST00000481739 IGKV2D-30A0A075B6S6 120 aa8.6□□□□□ -1.03
RXRA-202ENST00000481739 C9orf92A6NGG3 77 aa8.59□□□□□ -1.03
RXRA-202ENST00000481739 Q75L30 129 aa8.56□□□□□ -1.04
RXRA-202ENST00000481739 PCLOQ9Y6V0 5065 aa8.53□□□□□ -1.04
RXRA-202ENST00000481739 A8MUN3 132 aa8.49□□□□□ -1.05
RXRA-202ENST00000481739 CHKB-CPT1BH3BT56 60 aa8.47□□□□□ -1.05
RXRA-202ENST00000481739 LINC01558Q9Y6Z2 57 aa8.44□□□□□ -1.06
RXRA-202ENST00000481739 PSPHP1O15172 72 aa8.42□□□□□ -1.06
RXRA-202ENST00000481739 ATP11AUNQ6ZP68 121 aa8.4□□□□□ -1.06
RXRA-202ENST00000481739 SPINK7P58062 85 aa8.39□□□□□ -1.07
RXRA-202ENST00000481739 RPL37P61927 97 aaKnown RBP8.39□□□□□ -1.07
RXRA-202ENST00000481739 PRR15LQ9BU68 103 aa8.38□□□□□ -1.07
RXRA-202ENST00000481739 Q5VV11 94 aa8.37□□□□□ -1.07
RXRA-202ENST00000481739 XP32Q5T750 250 aa8.36□□□□□ -1.07
RXRA-202ENST00000481739 TPRXLQ17RH7 258 aa8.35□□□□□ -1.07
RXRA-202ENST00000481739 PRO0628Q9UI54 55 aa8.33□□□□□ -1.08
RXRA-202ENST00000481739 BRK1Q8WUW1 75 aa8.32□□□□□ -1.08
RXRA-202ENST00000481739 HERC1Q15751 4861 aa8.31□□□□□ -1.08
RXRA-202ENST00000481739 LPAP08519 4548 aa8.3□□□□□ -1.08
RXRA-202ENST00000481739 SPTSSBQ8NFR3 76 aa8.29□□□□□ -1.08
RXRA-202ENST00000481739 COX6B2Q6YFQ2 88 aa8.26□□□□□ -1.09
RXRA-202ENST00000481739 KRTAP3-1Q9BYR8 98 aa8.22□□□□□ -1.09
RXRA-202ENST00000481739 A0A1B0GU69 56 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms