RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 CDIP1Q9H305 208 aa12.79□□□□□ -0.36
SHISA4-203ENST00000481699 C9orf92A6NGG3 77 aa12.78□□□□□ -0.36
SHISA4-203ENST00000481699 IGHV6-1A0A0B4J1U7 121 aa12.74□□□□□ -0.37
SHISA4-203ENST00000481699 A8MWP4 228 aa12.73□□□□□ -0.37
SHISA4-203ENST00000481699 A0A1B0GVX0 72 aa12.72□□□□□ -0.37
SHISA4-203ENST00000481699 DSCR10P59022 87 aa12.68□□□□□ -0.38
SHISA4-203ENST00000481699 LINC00313P59037 77 aa12.68□□□□□ -0.38
SHISA4-203ENST00000481699 C8orf87E5RJ46 101 aa12.67□□□□□ -0.38
SHISA4-203ENST00000481699 IGKV3D-7A0A0C4DH55 119 aa12.66□□□□□ -0.38
SHISA4-203ENST00000481699 K7ERU9 68 aa12.65□□□□□ -0.38
SHISA4-203ENST00000481699 PRR15Q8IV56 129 aa12.64□□□□□ -0.39
SHISA4-203ENST00000481699 K7EQZ3 153 aa12.62□□□□□ -0.39
SHISA4-203ENST00000481699 CXCL6P80162 114 aa12.62□□□□□ -0.39
SHISA4-203ENST00000481699 XP32Q5T750 250 aa12.62□□□□□ -0.39
SHISA4-203ENST00000481699 LPAP08519 4548 aa12.6□□□□□ -0.39
SHISA4-203ENST00000481699 ATP5EP2Q5VTU8 51 aa12.59□□□□□ -0.39
SHISA4-203ENST00000481699 LINC00643Q86TS7 51 aa12.58□□□□□ -0.4
SHISA4-203ENST00000481699 Q8N9L7 120 aa12.58□□□□□ -0.4
SHISA4-203ENST00000481699 C8orf17Q9NRJ1 99 aa12.58□□□□□ -0.4
SHISA4-203ENST00000481699 NOTCH2NLQ7Z3S9 236 aa12.57□□□□□ -0.4
SHISA4-203ENST00000481699 MMP24-AS1A0A0U1RRL7 71 aa12.48□□□□□ -0.41
SHISA4-203ENST00000481699 SEC61BP60468 96 aaKnown RBP12.48□□□□□ -0.41
SHISA4-203ENST00000481699 hDV103S1A0JD37 113 aa12.47□□□□□ -0.41
SHISA4-203ENST00000481699 KRTAP16-1A8MUX0 517 aa12.47□□□□□ -0.41
SHISA4-203ENST00000481699 RPL37P61927 97 aaKnown RBP12.47□□□□□ -0.41
SHISA4-203ENST00000481699 Q75L30 129 aa12.47□□□□□ -0.41
SHISA4-203ENST00000481699 C20orf166-AS1Q96NR2 134 aa12.46□□□□□ -0.41
SHISA4-203ENST00000481699 HIST1H4AP62805 103 aaKnown RBP12.45□□□□□ -0.42
SHISA4-203ENST00000481699 CASC2Q6XLA1 102 aa12.44□□□□□ -0.42
SHISA4-203ENST00000481699 WFDC13Q8IUB5 93 aa12.44□□□□□ -0.42
SHISA4-203ENST00000481699 TMEM254Q8TBM7 123 aa12.44□□□□□ -0.42
SHISA4-203ENST00000481699 A8MUU9 505 aa12.43□□□□□ -0.42
SHISA4-203ENST00000481699 HCG22E2RYF7 251 aa12.43□□□□□ -0.42
SHISA4-203ENST00000481699 MRPL34Q9BQ48 92 aaKnown RBP12.42□□□□□ -0.42
SHISA4-203ENST00000481699 ATP11AUNQ6ZP68 121 aa12.41□□□□□ -0.42
SHISA4-203ENST00000481699 NDUFS5O43920 106 aa12.37□□□□□ -0.43
SHISA4-203ENST00000481699 KRTAP9-2Q9BYQ4 174 aa12.37□□□□□ -0.43
SHISA4-203ENST00000481699 PCOTHQ58A44 107 aa12.36□□□□□ -0.43
SHISA4-203ENST00000481699 Q8N9P0 234 aaPredicted RBP12.35□□□□□ -0.43
SHISA4-203ENST00000481699 A0A087WVE0 104 aa12.27□□□□□ -0.45
SHISA4-203ENST00000481699 MT-ATP8P03928 68 aa12.25□□□□□ -0.45
SHISA4-203ENST00000481699 ZCCHC13Q8WW36 166 aaKnown RBP12.24□□□□□ -0.45
SHISA4-203ENST00000481699 MUC17Q685J3 4493 aa12.23□□□□□ -0.45
SHISA4-203ENST00000481699 IMUPQ9GZP8 106 aa12.22□□□□□ -0.45
SHISA4-203ENST00000481699 KRTAP9-6A0A140TA67 174 aa12.17□□□□□ -0.46
SHISA4-203ENST00000481699 TP53AIP1Q9HCN2 124 aa12.17□□□□□ -0.46
SHISA4-203ENST00000481699 MUC2Q02817 5179 aa12.17□□□□□ -0.46
SHISA4-203ENST00000481699 SCGB1A1P11684 91 aa12.11□□□□□ -0.47
SHISA4-203ENST00000481699 FAT4Q6V0I7 4981 aa12.09□□□□□ -0.47
SHISA4-203ENST00000481699 KRTAP4-1Q9BYQ7 146 aa12.07□□□□□ -0.48
SHISA4-203ENST00000481699 Q5W150 140 aa12.05□□□□□ -0.48
SHISA4-203ENST00000481699 UQCRQO14949 82 aa12.03□□□□□ -0.48
SHISA4-203ENST00000481699 A0A0U1RQV1 116 aa12.02□□□□□ -0.49
SHISA4-203ENST00000481699 FAM236AA0A1B0GUQ0 79 aa12.01□□□□□ -0.49
SHISA4-203ENST00000481699 FAM236BA0A1B0GV22 79 aa12.01□□□□□ -0.49
SHISA4-203ENST00000481699 SPINK7P58062 85 aa11.99□□□□□ -0.49
SHISA4-203ENST00000481699 IGKV2D-30A0A075B6S6 120 aa11.97□□□□□ -0.49
SHISA4-203ENST00000481699 TRAV22A0A0B4J277 110 aa11.97□□□□□ -0.49
SHISA4-203ENST00000481699 IGKV2-30P06310 120 aa11.97□□□□□ -0.49
SHISA4-203ENST00000481699 LCE2AQ5TA79 106 aaPredicted RBP11.96□□□□□ -0.49
SHISA4-203ENST00000481699 C7orf65Q6ZTY9 151 aa11.94□□□□□ -0.5
SHISA4-203ENST00000481699 OCR1Q9BZK8 76 aa11.94□□□□□ -0.5
SHISA4-203ENST00000481699 H0Y9P7 68 aa11.91□□□□□ -0.5
SHISA4-203ENST00000481699 SMIM20Q8N5G0 67 aa11.91□□□□□ -0.5
SHISA4-203ENST00000481699 ATOX1O00244 68 aa11.9□□□□□ -0.5
SHISA4-203ENST00000481699 MP68P56378 58 aa11.87□□□□□ -0.51
SHISA4-203ENST00000481699 C5orf47Q569G3 176 aa11.84□□□□□ -0.51
SHISA4-203ENST00000481699 RBM12B-AS1Q9P1G2 102 aa11.84□□□□□ -0.51
SHISA4-203ENST00000481699 LOC101927531A0A1B0GV80 90 aa11.83□□□□□ -0.52
SHISA4-203ENST00000481699 COX6B2Q6YFQ2 88 aa11.83□□□□□ -0.52
SHISA4-203ENST00000481699 HRES1P13985 223 aa11.82□□□□□ -0.52
SHISA4-203ENST00000481699 TRAV7A0A075B6U4 112 aa11.81□□□□□ -0.52
SHISA4-203ENST00000481699 FAM236DA0A1B0GTK5 79 aa11.79□□□□□ -0.52
SHISA4-203ENST00000481699 FAM236CP0DP71 79 aa11.79□□□□□ -0.52
SHISA4-203ENST00000481699 C1orf64Q8NEQ6 169 aa11.78□□□□□ -0.52
SHISA4-203ENST00000481699 LINC00208Q96KT6 92 aa11.78□□□□□ -0.52
SHISA4-203ENST00000481699 CYP4F30PQ9H0H9 118 aa11.75□□□□□ -0.53
SHISA4-203ENST00000481699 H3BPC8 53 aa11.74□□□□□ -0.53
SHISA4-203ENST00000481699 MPLKIPQ8TAP9 179 aa11.71□□□□□ -0.53
SHISA4-203ENST00000481699 SERP2Q8N6R1 65 aa11.68□□□□□ -0.54
SHISA4-203ENST00000481699 C4orf26Q17RF5 130 aa11.65□□□□□ -0.54
SHISA4-203ENST00000481699 KRTAP19-2Q3LHN2 52 aa11.65□□□□□ -0.54
SHISA4-203ENST00000481699 LCE2CQ5TA81 110 aa11.6□□□□□ -0.55
SHISA4-203ENST00000481699 ANAPC13Q9BS18 74 aa11.55□□□□□ -0.56
SHISA4-203ENST00000481699 CRCT1Q9UGL9 99 aa11.55□□□□□ -0.56
SHISA4-203ENST00000481699 KLKP1Q107X0 134 aa11.54□□□□□ -0.56
SHISA4-203ENST00000481699 C20orf197Q8N268 126 aa11.53□□□□□ -0.56
SHISA4-203ENST00000481699 COX7CP15954 63 aa11.52□□□□□ -0.57
SHISA4-203ENST00000481699 SNURFQ9Y675 71 aa11.51□□□□□ -0.57
SHISA4-203ENST00000481699 H1FX-AS1Q4G0G2 97 aa11.5□□□□□ -0.57
SHISA4-203ENST00000481699 LCE2DQ5TA82 110 aaPredicted RBP11.49□□□□□ -0.57
SHISA4-203ENST00000481699 FSIP2Q5CZC0 6907 aa11.46□□□□□ -0.57
SHISA4-203ENST00000481699 M0R2T5 61 aa11.46□□□□□ -0.57
SHISA4-203ENST00000481699 MT1HP80294 61 aa11.46□□□□□ -0.57
SHISA4-203ENST00000481699 KRTAP3-1Q9BYR8 98 aa11.39□□□□□ -0.59
SHISA4-203ENST00000481699 A8MUN3 132 aa11.37□□□□□ -0.59
SHISA4-203ENST00000481699 FLGP20930 4061 aaPredicted RBP11.36□□□□□ -0.59
SHISA4-203ENST00000481699 S4R3F8 94 aa11.31□□□□□ -0.6
SHISA4-203ENST00000481699 NDUFC1O43677 76 aa11.28□□□□□ -0.6
SHISA4-203ENST00000481699 DMAC1Q96GE9 116 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms