RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 DSCR8Q96T75 97 aa9.22□□□□□ -0.93
CLK1-211ENST00000481641 TMA7Q9Y2S6 64 aaKnown RBP9.22□□□□□ -0.93
CLK1-211ENST00000481641 SSPOA2VEC9 5147 aa9.21□□□□□ -0.93
CLK1-211ENST00000481641 C8orf87E5RJ46 101 aa9.21□□□□□ -0.94
CLK1-211ENST00000481641 BAALC-AS2P0C853 105 aa9.2□□□□□ -0.94
CLK1-211ENST00000481641 MT1FP04733 61 aa9.19□□□□□ -0.94
CLK1-211ENST00000481641 C9JAW5 83 aa9.16□□□□□ -0.94
CLK1-211ENST00000481641 ZCCHC13Q8WW36 166 aaKnown RBP9.15□□□□□ -0.94
CLK1-211ENST00000481641 Q6ZQT0 140 aa9.14□□□□□ -0.95
CLK1-211ENST00000481641 NAA38Q9BRA0 125 aaKnown RBP9.13□□□□□ -0.95
CLK1-211ENST00000481641 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.12□□□□□ -0.95
CLK1-211ENST00000481641 J3KT08 172 aa9.12□□□□□ -0.95
CLK1-211ENST00000481641 LCE2BO14633 110 aa9.12□□□□□ -0.95
CLK1-211ENST00000481641 KRTAP10-10P60014 251 aa9.12□□□□□ -0.95
CLK1-211ENST00000481641 SPINK7P58062 85 aa9.11□□□□□ -0.95
CLK1-211ENST00000481641 KRTAP9-3Q9BYQ3 159 aa9.11□□□□□ -0.95
CLK1-211ENST00000481641 NDUFB1O75438 58 aa9.07□□□□□ -0.96
CLK1-211ENST00000481641 C21orf62-AS1Q17RA5 79 aa9.07□□□□□ -0.96
CLK1-211ENST00000481641 Q8N9P0 234 aaPredicted RBP9.07□□□□□ -0.96
CLK1-211ENST00000481641 ATXN8Q156A1 80 aa9.06□□□□□ -0.96
CLK1-211ENST00000481641 MTURNQ8N3F0 131 aa9.06□□□□□ -0.96
CLK1-211ENST00000481641 C8orf17Q9NRJ1 99 aa9.06□□□□□ -0.96
CLK1-211ENST00000481641 KRTAP9-7A8MTY7 169 aa9.05□□□□□ -0.96
CLK1-211ENST00000481641 A8MWP4 228 aa9.04□□□□□ -0.96
CLK1-211ENST00000481641 LOC110117498A0A087WWA1 95 aa9.03□□□□□ -0.96
CLK1-211ENST00000481641 IGKV3D-7A0A0C4DH55 119 aa9.03□□□□□ -0.96
CLK1-211ENST00000481641 JMJD7-PLA2G4BH0Y9G9 81 aa9.03□□□□□ -0.96
CLK1-211ENST00000481641 LYRM7Q5U5X0 104 aa9.02□□□□□ -0.97
CLK1-211ENST00000481641 KRTAP19-1Q8IUB9 90 aa9.02□□□□□ -0.97
CLK1-211ENST00000481641 FCGBPQ9Y6R7 5405 aaPredicted RBP9.01□□□□□ -0.97
CLK1-211ENST00000481641 M0R143 59 aa9.01□□□□□ -0.97
CLK1-211ENST00000481641 C14orf132Q9NPU4 83 aa9.01□□□□□ -0.97
CLK1-211ENST00000481641 WFDC13Q8IUB5 93 aa8.99□□□□□ -0.97
CLK1-211ENST00000481641 Q6ZVQ6 151 aa8.98□□□□□ -0.97
CLK1-211ENST00000481641 A0A1B0GW54 56 aa8.96□□□□□ -0.98
CLK1-211ENST00000481641 PDE6GP18545 87 aa8.96□□□□□ -0.98
CLK1-211ENST00000481641 PRR15Q8IV56 129 aa8.95□□□□□ -0.98
CLK1-211ENST00000481641 NREPQ16612 68 aa8.93□□□□□ -0.98
CLK1-211ENST00000481641 MMP24-AS1A0A0U1RRL7 71 aa8.91□□□□□ -0.98
CLK1-211ENST00000481641 MRPL34Q9BQ48 92 aaKnown RBP8.89□□□□□ -0.99
CLK1-211ENST00000481641 TMEM254Q8TBM7 123 aa8.88□□□□□ -0.99
CLK1-211ENST00000481641 BATFQ16520 125 aa8.87□□□□□ -0.99
CLK1-211ENST00000481641 K7EQZ3 153 aa8.85□□□□□ -0.99
CLK1-211ENST00000481641 hDV103S1A0JD37 113 aa8.83□□□□□ -1
CLK1-211ENST00000481641 NDUFS5O43920 106 aa8.83□□□□□ -1
CLK1-211ENST00000481641 SMIM6P0DI80 62 aa8.82□□□□□ -1
CLK1-211ENST00000481641 H1FX-AS1Q4G0G2 97 aa8.79□□□□□ -1
CLK1-211ENST00000481641 KRTAP19-6Q3LI70 58 aa8.78□□□□□ -1
CLK1-211ENST00000481641 IGKV2D-30A0A075B6S6 120 aa8.77□□□□□ -1.01
CLK1-211ENST00000481641 IGKV2-30P06310 120 aa8.77□□□□□ -1.01
CLK1-211ENST00000481641 C9orf118A6NHY6 69 aa8.76□□□□□ -1.01
CLK1-211ENST00000481641 H3BT86 120 aa8.76□□□□□ -1.01
CLK1-211ENST00000481641 Q5W150 140 aa8.76□□□□□ -1.01
CLK1-211ENST00000481641 TSTD3H0UI37 97 aa8.75□□□□□ -1.01
CLK1-211ENST00000481641 BPY2O14599 106 aa8.75□□□□□ -1.01
CLK1-211ENST00000481641 TAX1BP3O14907 124 aa8.74□□□□□ -1.01
CLK1-211ENST00000481641 A0A1W2PPM0 123 aa8.72□□□□□ -1.01
CLK1-211ENST00000481641 Q8N9L7 120 aa8.72□□□□□ -1.01
CLK1-211ENST00000481641 LINC00846Q9NV44 126 aa8.72□□□□□ -1.01
CLK1-211ENST00000481641 MACF1Q9UPN3 7388 aaKnown RBP8.7□□□□□ -1.02
CLK1-211ENST00000481641 C7orf65Q6ZTY9 151 aa8.69□□□□□ -1.02
CLK1-211ENST00000481641 HCG22E2RYF7 251 aa8.66□□□□□ -1.02
CLK1-211ENST00000481641 CASC2Q6XLA1 102 aa8.66□□□□□ -1.02
CLK1-211ENST00000481641 SYNE2Q8WXH0 6885 aaKnown RBP8.63□□□□□ -1.03
CLK1-211ENST00000481641 C4orf26Q17RF5 130 aa8.63□□□□□ -1.03
CLK1-211ENST00000481641 SMCPP49901 116 aaPredicted RBP8.61□□□□□ -1.03
CLK1-211ENST00000481641 SPCS1Q9Y6A9 102 aa8.6□□□□□ -1.03
CLK1-211ENST00000481641 LOC105371267A0A1B0GV96 52 aa8.58□□□□□ -1.04
CLK1-211ENST00000481641 CXCL6P80162 114 aa8.55□□□□□ -1.04
CLK1-211ENST00000481641 C5orf47Q569G3 176 aa8.54□□□□□ -1.04
CLK1-211ENST00000481641 KRTAP3-1Q9BYR8 98 aa8.52□□□□□ -1.05
CLK1-211ENST00000481641 UBL5Q9BZL1 73 aa8.49□□□□□ -1.05
CLK1-211ENST00000481641 PRO0461Q9UI25 63 aa8.49□□□□□ -1.05
CLK1-211ENST00000481641 FAM236AA0A1B0GUQ0 79 aa8.46□□□□□ -1.06
CLK1-211ENST00000481641 FAM236BA0A1B0GV22 79 aa8.46□□□□□ -1.06
CLK1-211ENST00000481641 KRTAP6-3Q3LI67 103 aa8.45□□□□□ -1.06
CLK1-211ENST00000481641 S4R3F8 94 aa8.45□□□□□ -1.06
CLK1-211ENST00000481641 C1orf64Q8NEQ6 169 aa8.43□□□□□ -1.06
CLK1-211ENST00000481641 K7EP34 96 aa8.41□□□□□ -1.06
CLK1-211ENST00000481641 LCA10Q71F78 164 aa8.41□□□□□ -1.06
CLK1-211ENST00000481641 COL5A1-AS1Q5SY13 56 aa8.4□□□□□ -1.06
CLK1-211ENST00000481641 CSAG1Q6PB30 78 aa8.39□□□□□ -1.07
CLK1-211ENST00000481641 MT1BP07438 61 aa8.38□□□□□ -1.07
CLK1-211ENST00000481641 A6NN06 94 aa8.33□□□□□ -1.08
CLK1-211ENST00000481641 TP53AIP1Q9HCN2 124 aa8.33□□□□□ -1.08
CLK1-211ENST00000481641 Q5VV11 94 aa8.32□□□□□ -1.08
CLK1-211ENST00000481641 SPRR2GQ9BYE4 73 aa8.32□□□□□ -1.08
CLK1-211ENST00000481641 KRTAP19-8Q3LI54 63 aa8.31□□□□□ -1.08
CLK1-211ENST00000481641 KRTAP3-3Q9BYR6 98 aa8.28□□□□□ -1.08
CLK1-211ENST00000481641 ETDBQ3ZM63 59 aa8.26□□□□□ -1.09
CLK1-211ENST00000481641 A0A087WVE0 104 aa8.25□□□□□ -1.09
CLK1-211ENST00000481641 KLKP1Q107X0 134 aa8.25□□□□□ -1.09
CLK1-211ENST00000481641 CYP4F30PQ9H0H9 118 aa8.25□□□□□ -1.09
CLK1-211ENST00000481641 GTF2H5Q6ZYL4 71 aa8.24□□□□□ -1.09
CLK1-211ENST00000481641 F8W1H4 67 aa8.22□□□□□ -1.09
CLK1-211ENST00000481641 KRTAP10-5P60370 271 aa8.2□□□□□ -1.1
CLK1-211ENST00000481641 TRAV22A0A0B4J277 110 aa8.15□□□□□ -1.1
CLK1-211ENST00000481641 NEBP20929 6669 aa8.14□□□□□ -1.11
CLK1-211ENST00000481641 LOC101927531A0A1B0GV80 90 aa8.13□□□□□ -1.11
CLK1-211ENST00000481641 MUC12Q9UKN1 5478 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 194.2 ms