RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 Q6ZQT0 140 aa6.75□□□□□ -1.33
HDAC1-207ENST00000481281 LOC110117498A0A087WWA1 95 aa6.74□□□□□ -1.33
HDAC1-207ENST00000481281 IGHV6-1A0A0B4J1U7 121 aa6.73□□□□□ -1.33
HDAC1-207ENST00000481281 A0A1B0GVX0 72 aa6.72□□□□□ -1.33
HDAC1-207ENST00000481281 A0A1B0GW54 56 aa6.72□□□□□ -1.33
HDAC1-207ENST00000481281 J3KT08 172 aa6.72□□□□□ -1.33
HDAC1-207ENST00000481281 C9orf118A6NHY6 69 aa6.71□□□□□ -1.34
HDAC1-207ENST00000481281 C8orf87E5RJ46 101 aa6.71□□□□□ -1.34
HDAC1-207ENST00000481281 PDE6GP18545 87 aa6.71□□□□□ -1.34
HDAC1-207ENST00000481281 SMCPP49901 116 aaPredicted RBP6.71□□□□□ -1.34
HDAC1-207ENST00000481281 TAX1BP3O14907 124 aa6.7□□□□□ -1.34
HDAC1-207ENST00000481281 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
HDAC1-207ENST00000481281 C14orf132Q9NPU4 83 aa6.7□□□□□ -1.34
HDAC1-207ENST00000481281 KRTAP10-6P60371 365 aaPredicted RBP6.69□□□□□ -1.34
HDAC1-207ENST00000481281 A0A1W2PPM0 123 aa6.67□□□□□ -1.34
HDAC1-207ENST00000481281 M0R2T5 61 aa6.67□□□□□ -1.34
HDAC1-207ENST00000481281 FLGP20930 4061 aaPredicted RBP6.66□□□□□ -1.34
HDAC1-207ENST00000481281 H3BT86 120 aa6.66□□□□□ -1.34
HDAC1-207ENST00000481281 A8MWP4 228 aa6.64□□□□□ -1.35
HDAC1-207ENST00000481281 NDUFB1O75438 58 aa6.64□□□□□ -1.35
HDAC1-207ENST00000481281 MTURNQ8N3F0 131 aa6.63□□□□□ -1.35
HDAC1-207ENST00000481281 IGKV3D-7A0A0C4DH55 119 aa6.61□□□□□ -1.35
HDAC1-207ENST00000481281 Q8N9P0 234 aaPredicted RBP6.61□□□□□ -1.35
HDAC1-207ENST00000481281 KRTAP9-6A0A140TA67 174 aa6.6□□□□□ -1.35
HDAC1-207ENST00000481281 HRES1P13985 223 aa6.6□□□□□ -1.35
HDAC1-207ENST00000481281 MPLKIPQ8TAP9 179 aa6.6□□□□□ -1.35
HDAC1-207ENST00000481281 C8orf17Q9NRJ1 99 aa6.6□□□□□ -1.35
HDAC1-207ENST00000481281 NREPQ16612 68 aa6.59□□□□□ -1.35
HDAC1-207ENST00000481281 ZCCHC13Q8WW36 166 aaKnown RBP6.59□□□□□ -1.35
HDAC1-207ENST00000481281 SPCS1Q9Y6A9 102 aa6.58□□□□□ -1.36
HDAC1-207ENST00000481281 PRR15Q8IV56 129 aa6.57□□□□□ -1.36
HDAC1-207ENST00000481281 COL5A1-AS1Q5SY13 56 aa6.55□□□□□ -1.36
HDAC1-207ENST00000481281 Q6ZVQ6 151 aa6.54□□□□□ -1.36
HDAC1-207ENST00000481281 RBM12B-AS1Q9P1G2 102 aa6.54□□□□□ -1.36
HDAC1-207ENST00000481281 MMP24-AS1A0A0U1RRL7 71 aa6.53□□□□□ -1.36
HDAC1-207ENST00000481281 FAM236DA0A1B0GTK5 79 aa6.53□□□□□ -1.36
HDAC1-207ENST00000481281 FAM236CP0DP71 79 aa6.53□□□□□ -1.36
HDAC1-207ENST00000481281 K7EQZ3 153 aa6.51□□□□□ -1.37
HDAC1-207ENST00000481281 SPINK7P58062 85 aa6.51□□□□□ -1.37
HDAC1-207ENST00000481281 TMEM254Q8TBM7 123 aa6.51□□□□□ -1.37
HDAC1-207ENST00000481281 PRO0461Q9UI25 63 aa6.5□□□□□ -1.37
HDAC1-207ENST00000481281 K7EP34 96 aa6.49□□□□□ -1.37
HDAC1-207ENST00000481281 MRPL34Q9BQ48 92 aaKnown RBP6.49□□□□□ -1.37
HDAC1-207ENST00000481281 BPY2O14599 106 aa6.48□□□□□ -1.37
HDAC1-207ENST00000481281 KRTAP9-8Q9BYQ0 159 aa6.48□□□□□ -1.37
HDAC1-207ENST00000481281 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
HDAC1-207ENST00000481281 hDV103S1A0JD37 113 aa6.47□□□□□ -1.37
HDAC1-207ENST00000481281 FSIP2Q5CZC0 6907 aa6.45□□□□□ -1.38
HDAC1-207ENST00000481281 WFDC13Q8IUB5 93 aa6.43□□□□□ -1.38
HDAC1-207ENST00000481281 Q8N9L7 120 aa6.42□□□□□ -1.38
HDAC1-207ENST00000481281 LINC00846Q9NV44 126 aa6.42□□□□□ -1.38
HDAC1-207ENST00000481281 NDUFS5O43920 106 aa6.4□□□□□ -1.38
HDAC1-207ENST00000481281 MT2AP02795 61 aa6.4□□□□□ -1.38
HDAC1-207ENST00000481281 GTF2H5Q6ZYL4 71 aa6.4□□□□□ -1.38
HDAC1-207ENST00000481281 PCP4L1A6NKN8 68 aa6.39□□□□□ -1.39
HDAC1-207ENST00000481281 CASC2Q6XLA1 102 aa6.39□□□□□ -1.39
HDAC1-207ENST00000481281 UBL5Q9BZL1 73 aa6.39□□□□□ -1.39
HDAC1-207ENST00000481281 F8W1H4 67 aa6.36□□□□□ -1.39
HDAC1-207ENST00000481281 Q5W150 140 aa6.36□□□□□ -1.39
HDAC1-207ENST00000481281 MT1FP04733 61 aa6.35□□□□□ -1.39
HDAC1-207ENST00000481281 HCG22E2RYF7 251 aa6.34□□□□□ -1.39
HDAC1-207ENST00000481281 ETDBQ3ZM63 59 aa6.33□□□□□ -1.4
HDAC1-207ENST00000481281 C7orf65Q6ZTY9 151 aa6.32□□□□□ -1.4
HDAC1-207ENST00000481281 IGKV2D-30A0A075B6S6 120 aa6.31□□□□□ -1.4
HDAC1-207ENST00000481281 IGKV2-30P06310 120 aa6.31□□□□□ -1.4
HDAC1-207ENST00000481281 CXCL6P80162 114 aa6.31□□□□□ -1.4
HDAC1-207ENST00000481281 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
HDAC1-207ENST00000481281 KRTAP9-3Q9BYQ3 159 aa6.28□□□□□ -1.4
HDAC1-207ENST00000481281 H1FX-AS1Q4G0G2 97 aa6.27□□□□□ -1.41
HDAC1-207ENST00000481281 C4orf26Q17RF5 130 aa6.21□□□□□ -1.42
HDAC1-207ENST00000481281 TP53AIP1Q9HCN2 124 aa6.21□□□□□ -1.42
HDAC1-207ENST00000481281 USH2AO75445 5202 aa6.2□□□□□ -1.42
HDAC1-207ENST00000481281 FAM240AA0A1B0GVK7 77 aa6.19□□□□□ -1.42
HDAC1-207ENST00000481281 ACYP1P07311 99 aa6.19□□□□□ -1.42
HDAC1-207ENST00000481281 SSPOA2VEC9 5147 aa6.16□□□□□ -1.42
HDAC1-207ENST00000481281 ATP5EP2Q5VTU8 51 aa6.14□□□□□ -1.43
HDAC1-207ENST00000481281 KRTAP3-1Q9BYR8 98 aa6.14□□□□□ -1.43
HDAC1-207ENST00000481281 C1orf64Q8NEQ6 169 aa6.1□□□□□ -1.43
HDAC1-207ENST00000481281 KRTAP19-1Q8IUB9 90 aa6.09□□□□□ -1.43
HDAC1-207ENST00000481281 TRAV22A0A0B4J277 110 aa6.08□□□□□ -1.44
HDAC1-207ENST00000481281 CYP4F30PQ9H0H9 118 aa6.08□□□□□ -1.44
HDAC1-207ENST00000481281 HIST1H4AP62805 103 aaKnown RBP6.07□□□□□ -1.44
HDAC1-207ENST00000481281 A0A1B0GV90 55 aa6.06□□□□□ -1.44
HDAC1-207ENST00000481281 S4R3F8 94 aa6.06□□□□□ -1.44
HDAC1-207ENST00000481281 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
HDAC1-207ENST00000481281 C5orf47Q569G3 176 aa6.05□□□□□ -1.44
HDAC1-207ENST00000481281 LINC00643Q86TS7 51 aa6.05□□□□□ -1.44
HDAC1-207ENST00000481281 LOC101927531A0A1B0GV80 90 aa6.04□□□□□ -1.44
HDAC1-207ENST00000481281 LCA10Q71F78 164 aa6.03□□□□□ -1.44
HDAC1-207ENST00000481281 UQCRQO14949 82 aa6.02□□□□□ -1.45
HDAC1-207ENST00000481281 A0A087WVE0 104 aa6.01□□□□□ -1.45
HDAC1-207ENST00000481281 LOC100996750A0A140TA64 210 aa6.01□□□□□ -1.45
HDAC1-207ENST00000481281 KRTAP19-6Q3LI70 58 aa6.01□□□□□ -1.45
HDAC1-207ENST00000481281 CSAG1Q6PB30 78 aa6.01□□□□□ -1.45
HDAC1-207ENST00000481281 KRTAP4-6Q9BYQ5 205 aa6.01□□□□□ -1.45
HDAC1-207ENST00000481281 FCGBPQ9Y6R7 5405 aaPredicted RBP6□□□□□ -1.45
HDAC1-207ENST00000481281 H0Y9P7 68 aa5.98□□□□□ -1.45
HDAC1-207ENST00000481281 ATOX1O00244 68 aa5.98□□□□□ -1.45
HDAC1-207ENST00000481281 FAM236AA0A1B0GUQ0 79 aa5.95□□□□□ -1.46
HDAC1-207ENST00000481281 FAM236BA0A1B0GV22 79 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms