RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 A0A1B0GV90 55 aa6.7□□□□□ -1.34
TRA2B-212ENST00000480461 PDE6GP18545 87 aa6.7□□□□□ -1.34
TRA2B-212ENST00000480461 DEFB116Q30KQ4 102 aa6.7□□□□□ -1.34
TRA2B-212ENST00000480461 SS18L2Q9UHA2 77 aa6.7□□□□□ -1.34
TRA2B-212ENST00000480461 C9orf92A6NGG3 77 aa6.69□□□□□ -1.34
TRA2B-212ENST00000480461 F8W1H4 67 aa6.69□□□□□ -1.34
TRA2B-212ENST00000480461 CDIP1Q9H305 208 aa6.69□□□□□ -1.34
TRA2B-212ENST00000480461 ETDBQ3ZM63 59 aa6.66□□□□□ -1.34
TRA2B-212ENST00000480461 A0A1B0GW54 56 aa6.65□□□□□ -1.34
TRA2B-212ENST00000480461 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.64□□□□□ -1.35
TRA2B-212ENST00000480461 IGKV4-1P06312 121 aa6.64□□□□□ -1.35
TRA2B-212ENST00000480461 NOTCH2NLQ7Z3S9 236 aa6.62□□□□□ -1.35
TRA2B-212ENST00000480461 C21orf62-AS1Q17RA5 79 aa6.6□□□□□ -1.35
TRA2B-212ENST00000480461 NREPQ16612 68 aa6.59□□□□□ -1.35
TRA2B-212ENST00000480461 SIGMAR1Q99720 223 aa6.59□□□□□ -1.35
TRA2B-212ENST00000480461 DSCR10P59022 87 aa6.58□□□□□ -1.36
TRA2B-212ENST00000480461 LINC00846Q9NV44 126 aa6.58□□□□□ -1.36
TRA2B-212ENST00000480461 KRTAP4-1Q9BYQ7 146 aa6.57□□□□□ -1.36
TRA2B-212ENST00000480461 IGHV6-1A0A0B4J1U7 121 aa6.55□□□□□ -1.36
TRA2B-212ENST00000480461 KRTAP16-1A8MUX0 517 aa6.55□□□□□ -1.36
TRA2B-212ENST00000480461 J3KT08 172 aa6.55□□□□□ -1.36
TRA2B-212ENST00000480461 Q6ZVQ6 151 aa6.55□□□□□ -1.36
TRA2B-212ENST00000480461 IGKV3D-7A0A0C4DH55 119 aa6.54□□□□□ -1.36
TRA2B-212ENST00000480461 A0A1B0GVX0 72 aa6.54□□□□□ -1.36
TRA2B-212ENST00000480461 LINC00313P59037 77 aa6.54□□□□□ -1.36
TRA2B-212ENST00000480461 RPL37P61927 97 aaKnown RBP6.53□□□□□ -1.36
TRA2B-212ENST00000480461 LCE3BQ5TA77 95 aa6.53□□□□□ -1.36
TRA2B-212ENST00000480461 A8MWP4 228 aa6.52□□□□□ -1.37
TRA2B-212ENST00000480461 PCOTHQ58A44 107 aa6.52□□□□□ -1.37
TRA2B-212ENST00000480461 SEC61BP60468 96 aaKnown RBP6.51□□□□□ -1.37
TRA2B-212ENST00000480461 C20orf166-AS1Q96NR2 134 aa6.51□□□□□ -1.37
TRA2B-212ENST00000480461 A8MUU9 505 aa6.5□□□□□ -1.37
TRA2B-212ENST00000480461 Q75L30 129 aa6.5□□□□□ -1.37
TRA2B-212ENST00000480461 PRR15Q8IV56 129 aa6.5□□□□□ -1.37
TRA2B-212ENST00000480461 K7EQZ3 153 aa6.48□□□□□ -1.37
TRA2B-212ENST00000480461 BPY2O14599 106 aa6.48□□□□□ -1.37
TRA2B-212ENST00000480461 C8orf87E5RJ46 101 aa6.47□□□□□ -1.37
TRA2B-212ENST00000480461 NDUFB1O75438 58 aa6.47□□□□□ -1.37
TRA2B-212ENST00000480461 Q8N9L7 120 aa6.47□□□□□ -1.37
TRA2B-212ENST00000480461 C8orf17Q9NRJ1 99 aa6.47□□□□□ -1.37
TRA2B-212ENST00000480461 UBL5Q9BZL1 73 aa6.46□□□□□ -1.38
TRA2B-212ENST00000480461 MMP24-AS1A0A0U1RRL7 71 aa6.44□□□□□ -1.38
TRA2B-212ENST00000480461 FAM240AA0A1B0GVK7 77 aa6.42□□□□□ -1.38
TRA2B-212ENST00000480461 ACYP1P07311 99 aa6.42□□□□□ -1.38
TRA2B-212ENST00000480461 ATP11AUNQ6ZP68 121 aa6.41□□□□□ -1.38
TRA2B-212ENST00000480461 Q8N9P0 234 aaPredicted RBP6.41□□□□□ -1.38
TRA2B-212ENST00000480461 KRTAP4-12Q9BQ66 201 aa6.41□□□□□ -1.38
TRA2B-212ENST00000480461 CXCL6P80162 114 aa6.38□□□□□ -1.39
TRA2B-212ENST00000480461 hDV103S1A0JD37 113 aa6.37□□□□□ -1.39
TRA2B-212ENST00000480461 KRTAP9-7A8MTY7 169 aa6.37□□□□□ -1.39
TRA2B-212ENST00000480461 KRTAP19-2Q3LHN2 52 aa6.36□□□□□ -1.39
TRA2B-212ENST00000480461 TMEM254Q8TBM7 123 aa6.36□□□□□ -1.39
TRA2B-212ENST00000480461 MRPL34Q9BQ48 92 aaKnown RBP6.36□□□□□ -1.39
TRA2B-212ENST00000480461 WFDC13Q8IUB5 93 aa6.35□□□□□ -1.39
TRA2B-212ENST00000480461 MT1HP80294 61 aa6.33□□□□□ -1.4
TRA2B-212ENST00000480461 CASC2Q6XLA1 102 aa6.33□□□□□ -1.4
TRA2B-212ENST00000480461 ZCCHC13Q8WW36 166 aaKnown RBP6.32□□□□□ -1.4
TRA2B-212ENST00000480461 HCG22E2RYF7 251 aa6.31□□□□□ -1.4
TRA2B-212ENST00000480461 LINC00643Q86TS7 51 aa6.31□□□□□ -1.4
TRA2B-212ENST00000480461 KRTAP9-9Q9BYP9 154 aa6.31□□□□□ -1.4
TRA2B-212ENST00000480461 KRTAP9-4Q9BYQ2 154 aa6.31□□□□□ -1.4
TRA2B-212ENST00000480461 Q5W150 140 aa6.3□□□□□ -1.4
TRA2B-212ENST00000480461 J3QR89 54 aa6.28□□□□□ -1.4
TRA2B-212ENST00000480461 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
TRA2B-212ENST00000480461 NDUFS5O43920 106 aa6.27□□□□□ -1.41
TRA2B-212ENST00000480461 KRTAP10-6P60371 365 aaPredicted RBP6.27□□□□□ -1.41
TRA2B-212ENST00000480461 ATP5EP2Q5VTU8 51 aa6.27□□□□□ -1.41
TRA2B-212ENST00000480461 A0A087WVE0 104 aa6.24□□□□□ -1.41
TRA2B-212ENST00000480461 SPINK7P58062 85 aa6.24□□□□□ -1.41
TRA2B-212ENST00000480461 HIST1H4AP62805 103 aaKnown RBP6.24□□□□□ -1.41
TRA2B-212ENST00000480461 KRTAP19-1Q8IUB9 90 aa6.24□□□□□ -1.41
TRA2B-212ENST00000480461 HRES1P13985 223 aa6.23□□□□□ -1.41
TRA2B-212ENST00000480461 MPLKIPQ8TAP9 179 aa6.22□□□□□ -1.41
TRA2B-212ENST00000480461 K7ERU9 68 aa6.21□□□□□ -1.42
TRA2B-212ENST00000480461 FLGP20930 4061 aaPredicted RBP6.18□□□□□ -1.42
TRA2B-212ENST00000480461 MT-ATP8P03928 68 aa6.17□□□□□ -1.42
TRA2B-212ENST00000480461 TP53AIP1Q9HCN2 124 aa6.15□□□□□ -1.42
TRA2B-212ENST00000480461 USH2AO75445 5202 aa6.15□□□□□ -1.43
TRA2B-212ENST00000480461 M0R2T5 61 aa6.14□□□□□ -1.43
TRA2B-212ENST00000480461 SSPOA2VEC9 5147 aa6.13□□□□□ -1.43
TRA2B-212ENST00000480461 IGKV2D-30A0A075B6S6 120 aa6.13□□□□□ -1.43
TRA2B-212ENST00000480461 IGKV2-30P06310 120 aa6.13□□□□□ -1.43
TRA2B-212ENST00000480461 COX6B2Q6YFQ2 88 aa6.13□□□□□ -1.43
TRA2B-212ENST00000480461 C7orf65Q6ZTY9 151 aa6.09□□□□□ -1.43
TRA2B-212ENST00000480461 OCR1Q9BZK8 76 aa6.09□□□□□ -1.43
TRA2B-212ENST00000480461 FCGBPQ9Y6R7 5405 aaPredicted RBP6.08□□□□□ -1.44
TRA2B-212ENST00000480461 IMUPQ9GZP8 106 aa6.08□□□□□ -1.44
TRA2B-212ENST00000480461 RBM12B-AS1Q9P1G2 102 aa6.08□□□□□ -1.44
TRA2B-212ENST00000480461 UQCRQO14949 82 aa6.07□□□□□ -1.44
TRA2B-212ENST00000480461 LCE1DQ5T752 114 aa6.07□□□□□ -1.44
TRA2B-212ENST00000480461 KRTAP4-7Q9BYR0 210 aa6.07□□□□□ -1.44
TRA2B-212ENST00000480461 TRAV22A0A0B4J277 110 aa6.05□□□□□ -1.44
TRA2B-212ENST00000480461 FAM236DA0A1B0GTK5 79 aa6.05□□□□□ -1.44
TRA2B-212ENST00000480461 FAM236CP0DP71 79 aa6.05□□□□□ -1.44
TRA2B-212ENST00000480461 CYP4F30PQ9H0H9 118 aa6.05□□□□□ -1.44
TRA2B-212ENST00000480461 C4orf26Q17RF5 130 aa6.04□□□□□ -1.44
TRA2B-212ENST00000480461 KRTAP3-1Q9BYR8 98 aa6.03□□□□□ -1.44
TRA2B-212ENST00000480461 H0Y9P7 68 aa6.02□□□□□ -1.45
TRA2B-212ENST00000480461 SCGB1A1P11684 91 aa6□□□□□ -1.45
TRA2B-212ENST00000480461 SYNE2Q8WXH0 6885 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms