RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 LIMD2Q9BT23 127 aa6.41□□□□□ -1.38
VTI1A-204ENST00000480057 SPINK1P00995 79 aa6.4□□□□□ -1.38
VTI1A-204ENST00000480057 SPAG11AQ6PDA7 123 aa6.4□□□□□ -1.38
VTI1A-204ENST00000480057 PKHD1L1Q86WI1 4243 aa6.39□□□□□ -1.39
VTI1A-204ENST00000480057 A0A1B0GVX0 72 aa6.36□□□□□ -1.39
VTI1A-204ENST00000480057 KRTAP29-1A8MX34 341 aaPredicted RBP6.36□□□□□ -1.39
VTI1A-204ENST00000480057 PRR26Q8N8Z3 221 aa6.36□□□□□ -1.39
VTI1A-204ENST00000480057 CCDC179H3BU77 68 aa6.35□□□□□ -1.39
VTI1A-204ENST00000480057 LINC00304Q8N9R0 145 aa6.35□□□□□ -1.39
VTI1A-204ENST00000480057 OCR1Q9BZK8 76 aa6.35□□□□□ -1.39
VTI1A-204ENST00000480057 MMP24-AS1A0A0U1RRL7 71 aa6.34□□□□□ -1.39
VTI1A-204ENST00000480057 Q5VSD8 79 aa6.34□□□□□ -1.39
VTI1A-204ENST00000480057 CASC2Q6XLA1 102 aa6.34□□□□□ -1.39
VTI1A-204ENST00000480057 RYR1P21817 5038 aa6.34□□□□□ -1.39
VTI1A-204ENST00000480057 C8orf87E5RJ46 101 aa6.33□□□□□ -1.4
VTI1A-204ENST00000480057 FAT1Q14517 4588 aa6.32□□□□□ -1.4
VTI1A-204ENST00000480057 C1orf195Q5TG92 126 aa6.32□□□□□ -1.4
VTI1A-204ENST00000480057 C8orf17Q9NRJ1 99 aa6.32□□□□□ -1.4
VTI1A-204ENST00000480057 WFDC13Q8IUB5 93 aa6.31□□□□□ -1.4
VTI1A-204ENST00000480057 HSPG2P98160 4391 aa6.31□□□□□ -1.4
VTI1A-204ENST00000480057 hDV103S1A0JD37 113 aa6.3□□□□□ -1.4
VTI1A-204ENST00000480057 LCE3BQ5TA77 95 aa6.3□□□□□ -1.4
VTI1A-204ENST00000480057 IGHV6-1A0A0B4J1U7 121 aa6.29□□□□□ -1.4
VTI1A-204ENST00000480057 Q8N1X5 172 aa6.29□□□□□ -1.4
VTI1A-204ENST00000480057 TMEM254Q8TBM7 123 aa6.29□□□□□ -1.4
VTI1A-204ENST00000480057 C5orf47Q569G3 176 aa6.28□□□□□ -1.4
VTI1A-204ENST00000480057 KRTAP4-12Q9BQ66 201 aa6.28□□□□□ -1.4
VTI1A-204ENST00000480057 KLKP1Q107X0 134 aa6.27□□□□□ -1.41
VTI1A-204ENST00000480057 TP53AIP1Q9HCN2 124 aa6.27□□□□□ -1.41
VTI1A-204ENST00000480057 MRPL34Q9BQ48 92 aaKnown RBP6.26□□□□□ -1.41
VTI1A-204ENST00000480057 KRTAP10-8P60410 259 aa6.25□□□□□ -1.41
VTI1A-204ENST00000480057 C20orf197Q8N268 126 aa6.25□□□□□ -1.41
VTI1A-204ENST00000480057 NDUFC1O43677 76 aa6.24□□□□□ -1.41
VTI1A-204ENST00000480057 LINC00313P59037 77 aa6.24□□□□□ -1.41
VTI1A-204ENST00000480057 A0A0U1RQV1 116 aa6.23□□□□□ -1.41
VTI1A-204ENST00000480057 H3BPC8 53 aa6.23□□□□□ -1.41
VTI1A-204ENST00000480057 MP68P56378 58 aa6.21□□□□□ -1.42
VTI1A-204ENST00000480057 NOTCH2NLQ7Z3S9 236 aa6.21□□□□□ -1.42
VTI1A-204ENST00000480057 KRTAP9-9Q9BYP9 154 aa6.21□□□□□ -1.42
VTI1A-204ENST00000480057 KRTAP9-4Q9BYQ2 154 aa6.21□□□□□ -1.42
VTI1A-204ENST00000480057 TMEM258P61165 79 aa6.19□□□□□ -1.42
VTI1A-204ENST00000480057 ZCCHC13Q8WW36 166 aaKnown RBP6.19□□□□□ -1.42
VTI1A-204ENST00000480057 EPPK1P58107 5090 aaKnown RBP6.18□□□□□ -1.42
VTI1A-204ENST00000480057 KIAA1109Q2LD37 5005 aa6.18□□□□□ -1.42
VTI1A-204ENST00000480057 TRAV22A0A0B4J277 110 aa6.18□□□□□ -1.42
VTI1A-204ENST00000480057 Q8N9P0 234 aaPredicted RBP6.18□□□□□ -1.42
VTI1A-204ENST00000480057 KRTAP17-1Q9BYP8 105 aa6.18□□□□□ -1.42
VTI1A-204ENST00000480057 CYSTM1Q9H1C7 97 aa6.18□□□□□ -1.42
VTI1A-204ENST00000480057 KRTAP16-1A8MUX0 517 aa6.17□□□□□ -1.42
VTI1A-204ENST00000480057 H0Y9P7 68 aa6.17□□□□□ -1.42
VTI1A-204ENST00000480057 SNURFQ9Y675 71 aa6.17□□□□□ -1.42
VTI1A-204ENST00000480057 H7BZZ5 65 aa6.16□□□□□ -1.42
VTI1A-204ENST00000480057 NDUFS5O43920 106 aa6.16□□□□□ -1.42
VTI1A-204ENST00000480057 OXTP01178 125 aa6.16□□□□□ -1.42
VTI1A-204ENST00000480057 TNXBP22105 4242 aa6.13□□□□□ -1.43
VTI1A-204ENST00000480057 ATP5EP56381 51 aaPredicted RBP6.13□□□□□ -1.43
VTI1A-204ENST00000480057 FP248Q71RG6 208 aaPredicted RBP6.13□□□□□ -1.43
VTI1A-204ENST00000480057 KRTAP19-1Q8IUB9 90 aa6.13□□□□□ -1.43
VTI1A-204ENST00000480057 FAT3Q8TDW7 4589 aa6.13□□□□□ -1.43
VTI1A-204ENST00000480057 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
VTI1A-204ENST00000480057 LINC00208Q96KT6 92 aa6.12□□□□□ -1.43
VTI1A-204ENST00000480057 MT1HL1P0DM35 61 aa6.11□□□□□ -1.43
VTI1A-204ENST00000480057 KRTAP13-3Q3SY46 172 aa6.11□□□□□ -1.43
VTI1A-204ENST00000480057 FLG2Q5D862 2391 aaPredicted RBP6.11□□□□□ -1.43
VTI1A-204ENST00000480057 C1orf64Q8NEQ6 169 aa6.1□□□□□ -1.43
VTI1A-204ENST00000480057 FAM236DA0A1B0GTK5 79 aa6.09□□□□□ -1.43
VTI1A-204ENST00000480057 LOC101927531A0A1B0GV80 90 aa6.09□□□□□ -1.43
VTI1A-204ENST00000480057 FAM236CP0DP71 79 aa6.09□□□□□ -1.43
VTI1A-204ENST00000480057 BIRC6Q9NR09 4857 aa6.06□□□□□ -1.44
VTI1A-204ENST00000480057 Q5W150 140 aa6.06□□□□□ -1.44
VTI1A-204ENST00000480057 C20orf166-AS1Q96NR2 134 aa6.06□□□□□ -1.44
VTI1A-204ENST00000480057 RETNLBQ9BQ08 111 aa6.06□□□□□ -1.44
VTI1A-204ENST00000480057 LRP1Q07954 4544 aaKnown RBP6.06□□□□□ -1.44
VTI1A-204ENST00000480057 A8MUU9 505 aa6.05□□□□□ -1.44
VTI1A-204ENST00000480057 SPANXA2-OT1Q8N9U9 137 aa6.05□□□□□ -1.44
VTI1A-204ENST00000480057 RPS28P62857 69 aaKnown RBP6.04□□□□□ -1.44
VTI1A-204ENST00000480057 KRTAP4-5Q9BYR2 181 aa6.02□□□□□ -1.45
VTI1A-204ENST00000480057 IGKV2-30P06310 120 aa6.01□□□□□ -1.45
VTI1A-204ENST00000480057 Q75L30 129 aa6.01□□□□□ -1.45
VTI1A-204ENST00000480057 CYP4F30PQ9H0H9 118 aa6.01□□□□□ -1.45
VTI1A-204ENST00000480057 IGLV7-46A0A075B6I9 117 aa6□□□□□ -1.45
VTI1A-204ENST00000480057 C9orf92A6NGG3 77 aa6□□□□□ -1.45
VTI1A-204ENST00000480057 SERP1Q9Y6X1 66 aa6□□□□□ -1.45
VTI1A-204ENST00000480057 HERC2O95714 4834 aa5.99□□□□□ -1.45
VTI1A-204ENST00000480057 PCOTHQ58A44 107 aa5.96□□□□□ -1.46
VTI1A-204ENST00000480057 MYCBP2O75592 4640 aa5.95□□□□□ -1.46
VTI1A-204ENST00000480057 DMBT1Q9UGM3 2413 aaPredicted RBP5.95□□□□□ -1.46
VTI1A-204ENST00000480057 C7orf65Q6ZTY9 151 aa5.94□□□□□ -1.46
VTI1A-204ENST00000480057 TPRXLQ17RH7 258 aa5.93□□□□□ -1.46
VTI1A-204ENST00000480057 RPL37P61927 97 aaKnown RBP5.92□□□□□ -1.46
VTI1A-204ENST00000480057 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
VTI1A-204ENST00000480057 PRR4Q16378 134 aa5.91□□□□□ -1.46
VTI1A-204ENST00000480057 ABCA13Q86UQ4 5058 aa5.9□□□□□ -1.46
VTI1A-204ENST00000480057 IGKV2D-30A0A075B6S6 120 aa5.9□□□□□ -1.46
VTI1A-204ENST00000480057 HRES1P13985 223 aa5.89□□□□□ -1.47
VTI1A-204ENST00000480057 ATP11AUNQ6ZP68 121 aa5.89□□□□□ -1.47
VTI1A-204ENST00000480057 LCE1DQ5T752 114 aa5.88□□□□□ -1.47
VTI1A-204ENST00000480057 DMAC1Q96GE9 116 aa5.86□□□□□ -1.47
VTI1A-204ENST00000480057 SMIM26A0A096LP01 95 aa5.85□□□□□ -1.47
VTI1A-204ENST00000480057 ACYP2P14621 99 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms