RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 LINC00472Q9H8W2 130 aa3.33□□□□□ -1.88
FN1-220ENST00000480024 SYNE2Q8WXH0 6885 aaKnown RBP3.32□□□□□ -1.88
FN1-220ENST00000480024 KRTAP9-7A8MTY7 169 aa3.32□□□□□ -1.88
FN1-220ENST00000480024 COX6CP09669 75 aa3.32□□□□□ -1.88
FN1-220ENST00000480024 A0A1B0GVX0 72 aa3.31□□□□□ -1.88
FN1-220ENST00000480024 MACF1Q9UPN3 7388 aaKnown RBP3.31□□□□□ -1.88
FN1-220ENST00000480024 C8orf87E5RJ46 101 aa3.3□□□□□ -1.88
FN1-220ENST00000480024 KRTAP10-10P60014 251 aa3.3□□□□□ -1.88
FN1-220ENST00000480024 UBE2V1Q13404 147 aa3.3□□□□□ -1.88
FN1-220ENST00000480024 PYY3Q5JQD4 70 aa3.3□□□□□ -1.88
FN1-220ENST00000480024 RBM3P98179 157 aaKnown RBP3.29□□□□□ -1.88
FN1-220ENST00000480024 DSCR8Q96T75 97 aa3.29□□□□□ -1.88
FN1-220ENST00000480024 SCGB1C2P0DMR2 95 aa3.28□□□□□ -1.88
FN1-220ENST00000480024 KRTAP19-1Q8IUB9 90 aa3.28□□□□□ -1.88
FN1-220ENST00000480024 ZCCHC13Q8WW36 166 aaKnown RBP3.28□□□□□ -1.88
FN1-220ENST00000480024 KRTAP9-3Q9BYQ3 159 aa3.28□□□□□ -1.88
FN1-220ENST00000480024 J3KT08 172 aa3.27□□□□□ -1.89
FN1-220ENST00000480024 SPINK7P58062 85 aa3.27□□□□□ -1.89
FN1-220ENST00000480024 MTURNQ8N3F0 131 aa3.27□□□□□ -1.89
FN1-220ENST00000480024 UQCR10Q9UDW1 63 aa3.27□□□□□ -1.89
FN1-220ENST00000480024 C9JAW5 83 aa3.26□□□□□ -1.89
FN1-220ENST00000480024 BAALC-AS2P0C853 105 aa3.25□□□□□ -1.89
FN1-220ENST00000480024 LYRM7Q5U5X0 104 aa3.25□□□□□ -1.89
FN1-220ENST00000480024 Q6ZQT0 140 aa3.25□□□□□ -1.89
FN1-220ENST00000480024 WFDC13Q8IUB5 93 aa3.25□□□□□ -1.89
FN1-220ENST00000480024 TMA7Q9Y2S6 64 aaKnown RBP3.25□□□□□ -1.89
FN1-220ENST00000480024 LOC100996750A0A140TA64 210 aa3.24□□□□□ -1.89
FN1-220ENST00000480024 NDUFB1O75438 58 aa3.24□□□□□ -1.89
FN1-220ENST00000480024 C21orf62-AS1Q17RA5 79 aa3.24□□□□□ -1.89
FN1-220ENST00000480024 NAA38Q9BRA0 125 aaKnown RBP3.24□□□□□ -1.89
FN1-220ENST00000480024 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
FN1-220ENST00000480024 C8orf17Q9NRJ1 99 aa3.24□□□□□ -1.89
FN1-220ENST00000480024 A8MWP4 228 aa3.23□□□□□ -1.89
FN1-220ENST00000480024 Q8N9P0 234 aaPredicted RBP3.23□□□□□ -1.89
FN1-220ENST00000480024 IGKV3D-7A0A0C4DH55 119 aa3.22□□□□□ -1.89
FN1-220ENST00000480024 ATXN8Q156A1 80 aa3.22□□□□□ -1.89
FN1-220ENST00000480024 LOC110117498A0A087WWA1 95 aa3.21□□□□□ -1.9
FN1-220ENST00000480024 JMJD7-PLA2G4BH0Y9G9 81 aa3.21□□□□□ -1.9
FN1-220ENST00000480024 Q6ZVQ6 151 aa3.21□□□□□ -1.9
FN1-220ENST00000480024 C14orf132Q9NPU4 83 aa3.21□□□□□ -1.9
FN1-220ENST00000480024 M0R143 59 aa3.19□□□□□ -1.9
FN1-220ENST00000480024 PRR15Q8IV56 129 aa3.19□□□□□ -1.9
FN1-220ENST00000480024 MMP24-AS1A0A0U1RRL7 71 aa3.18□□□□□ -1.9
FN1-220ENST00000480024 A0A1B0GW54 56 aa3.18□□□□□ -1.9
FN1-220ENST00000480024 PDE6GP18545 87 aa3.18□□□□□ -1.9
FN1-220ENST00000480024 NREPQ16612 68 aa3.18□□□□□ -1.9
FN1-220ENST00000480024 KRTAP19-6Q3LI70 58 aa3.18□□□□□ -1.9
FN1-220ENST00000480024 LINC00846Q9NV44 126 aa3.18□□□□□ -1.9
FN1-220ENST00000480024 K7EQZ3 153 aa3.17□□□□□ -1.9
FN1-220ENST00000480024 NDUFS5O43920 106 aa3.17□□□□□ -1.9
FN1-220ENST00000480024 TMEM254Q8TBM7 123 aa3.17□□□□□ -1.9
FN1-220ENST00000480024 MRPL34Q9BQ48 92 aaKnown RBP3.17□□□□□ -1.9
FN1-220ENST00000480024 IGKV2D-30A0A075B6S6 120 aa3.15□□□□□ -1.91
FN1-220ENST00000480024 hDV103S1A0JD37 113 aa3.15□□□□□ -1.91
FN1-220ENST00000480024 IGKV2-30P06310 120 aa3.15□□□□□ -1.91
FN1-220ENST00000480024 H1FX-AS1Q4G0G2 97 aa3.15□□□□□ -1.91
FN1-220ENST00000480024 NEBP20929 6669 aa3.14□□□□□ -1.91
FN1-220ENST00000480024 BATFQ16520 125 aa3.14□□□□□ -1.91
FN1-220ENST00000480024 C7orf65Q6ZTY9 151 aa3.13□□□□□ -1.91
FN1-220ENST00000480024 BPY2O14599 106 aa3.12□□□□□ -1.91
FN1-220ENST00000480024 H3BT86 120 aa3.11□□□□□ -1.91
FN1-220ENST00000480024 Q5W150 140 aa3.11□□□□□ -1.91
FN1-220ENST00000480024 Q8N9L7 120 aa3.11□□□□□ -1.91
FN1-220ENST00000480024 HCG22E2RYF7 251 aa3.1□□□□□ -1.91
FN1-220ENST00000480024 SMIM6P0DI80 62 aa3.1□□□□□ -1.91
FN1-220ENST00000480024 CASC2Q6XLA1 102 aa3.1□□□□□ -1.91
FN1-220ENST00000480024 TSTD3H0UI37 97 aa3.09□□□□□ -1.91
FN1-220ENST00000480024 C4orf26Q17RF5 130 aa3.09□□□□□ -1.91
FN1-220ENST00000480024 MUC12Q9UKN1 5478 aa3.08□□□□□ -1.92
FN1-220ENST00000480024 A0A1W2PPM0 123 aa3.08□□□□□ -1.92
FN1-220ENST00000480024 C9orf118A6NHY6 69 aa3.08□□□□□ -1.92
FN1-220ENST00000480024 C5orf47Q569G3 176 aa3.08□□□□□ -1.92
FN1-220ENST00000480024 FAM236AA0A1B0GUQ0 79 aa3.07□□□□□ -1.92
FN1-220ENST00000480024 FAM236BA0A1B0GV22 79 aa3.07□□□□□ -1.92
FN1-220ENST00000480024 TAX1BP3O14907 124 aa3.07□□□□□ -1.92
FN1-220ENST00000480024 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
FN1-220ENST00000480024 CXCL6P80162 114 aa3.06□□□□□ -1.92
FN1-220ENST00000480024 SPCS1Q9Y6A9 102 aa3.04□□□□□ -1.92
FN1-220ENST00000480024 S4R3F8 94 aa3.04□□□□□ -1.92
FN1-220ENST00000480024 A6NN06 94 aa3.03□□□□□ -1.92
FN1-220ENST00000480024 MT1BP07438 61 aa3.02□□□□□ -1.93
FN1-220ENST00000480024 Q5VV11 94 aa3.02□□□□□ -1.93
FN1-220ENST00000480024 LCA10Q71F78 164 aa3.02□□□□□ -1.93
FN1-220ENST00000480024 KRTAP3-1Q9BYR8 98 aa3.02□□□□□ -1.93
FN1-220ENST00000480024 UBL5Q9BZL1 73 aa3.02□□□□□ -1.93
FN1-220ENST00000480024 C1orf64Q8NEQ6 169 aa3.01□□□□□ -1.93
FN1-220ENST00000480024 MDN1Q9NU22 5596 aa3□□□□□ -1.93
FN1-220ENST00000480024 CSAG1Q6PB30 78 aa3□□□□□ -1.93
FN1-220ENST00000480024 KMT2DO14686 5537 aa3□□□□□ -1.93
FN1-220ENST00000480024 KRTAP19-8Q3LI54 63 aa2.99□□□□□ -1.93
FN1-220ENST00000480024 SPRR2GQ9BYE4 73 aa2.99□□□□□ -1.93
FN1-220ENST00000480024 PRO0461Q9UI25 63 aa2.98□□□□□ -1.93
FN1-220ENST00000480024 LOC105371267A0A1B0GV96 52 aa2.97□□□□□ -1.93
FN1-220ENST00000480024 K7EP34 96 aa2.97□□□□□ -1.93
FN1-220ENST00000480024 KLKP1Q107X0 134 aa2.97□□□□□ -1.93
FN1-220ENST00000480024 KRTAP4-8Q9BYQ9 185 aa2.97□□□□□ -1.93
FN1-220ENST00000480024 TP53AIP1Q9HCN2 124 aa2.97□□□□□ -1.93
FN1-220ENST00000480024 KRTAP10-5P60370 271 aa2.96□□□□□ -1.94
FN1-220ENST00000480024 COL5A1-AS1Q5SY13 56 aa2.95□□□□□ -1.94
FN1-220ENST00000480024 A0A087WVE0 104 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms