RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 ALMS1Q8TCU4 4167 aa8□□□□□ -1.13
C9orf78-205ENST00000480023 NBEAL1Q6ZS30 2694 aa7.99□□□□□ -1.13
C9orf78-205ENST00000480023 KRTAP24-1Q3LI83 254 aa7.99□□□□□ -1.13
C9orf78-205ENST00000480023 CSMD3Q7Z407 3707 aa7.99□□□□□ -1.13
C9orf78-205ENST00000480023 STAB1Q9NY15 2570 aa7.98□□□□□ -1.13
C9orf78-205ENST00000480023 APLNQ9ULZ1 77 aa7.98□□□□□ -1.13
C9orf78-205ENST00000480023 SPATA8Q6RVD6 105 aa7.97□□□□□ -1.13
C9orf78-205ENST00000480023 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.97□□□□□ -1.13
C9orf78-205ENST00000480023 PRAC1Q96KF2 57 aa7.96□□□□□ -1.14
C9orf78-205ENST00000480023 Q6ZRN7 208 aaPredicted RBP7.95□□□□□ -1.14
C9orf78-205ENST00000480023 COL6A5A8TX70 2615 aa7.95□□□□□ -1.14
C9orf78-205ENST00000480023 RTL8CO15255 209 aa7.94□□□□□ -1.14
C9orf78-205ENST00000480023 A0A1B0GU69 56 aa7.94□□□□□ -1.14
C9orf78-205ENST00000480023 IGLV5-52A0A0A0MRZ9 124 aa7.93□□□□□ -1.14
C9orf78-205ENST00000480023 COL7A1Q02388 2944 aa7.93□□□□□ -1.14
C9orf78-205ENST00000480023 NBDYA0A0U1RRE5 68 aa7.91□□□□□ -1.14
C9orf78-205ENST00000480023 ZNF861PO60384 105 aa7.91□□□□□ -1.14
C9orf78-205ENST00000480023 PSORS1C2Q9UIG4 136 aa7.91□□□□□ -1.14
C9orf78-205ENST00000480023 ADM2Q7Z4H4 148 aa7.91□□□□□ -1.14
C9orf78-205ENST00000480023 STAB2Q8WWQ8 2551 aa7.9□□□□□ -1.14
C9orf78-205ENST00000480023 ANAPC11Q9NYG5 84 aa7.9□□□□□ -1.14
C9orf78-205ENST00000480023 LINC01554Q52M75 96 aa7.9□□□□□ -1.15
C9orf78-205ENST00000480023 SPINK6Q6UWN8 80 aa7.9□□□□□ -1.15
C9orf78-205ENST00000480023 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
C9orf78-205ENST00000480023 UQCR11O14957 56 aa7.87□□□□□ -1.15
C9orf78-205ENST00000480023 IGKV2-30P06310 120 aa7.87□□□□□ -1.15
C9orf78-205ENST00000480023 MIR22HGQ0VDD5 57 aa7.87□□□□□ -1.15
C9orf78-205ENST00000480023 DYNC2H1Q8NCM8 4307 aaKnown RBP7.85□□□□□ -1.15
C9orf78-205ENST00000480023 DNAH8Q96JB1 4490 aa7.84□□□□□ -1.15
C9orf78-205ENST00000480023 A0A087WTM6 91 aa7.8□□□□□ -1.16
C9orf78-205ENST00000480023 C4orf48Q5BLP8 95 aa7.8□□□□□ -1.16
C9orf78-205ENST00000480023 SSBP3-AS1Q7Z2R9 100 aa7.8□□□□□ -1.16
C9orf78-205ENST00000480023 CIRBP-AS1Q8TBR5 109 aa7.8□□□□□ -1.16
C9orf78-205ENST00000480023 DNAH7Q8WXX0 4024 aa7.79□□□□□ -1.16
C9orf78-205ENST00000480023 IGLV7-43P04211 117 aa7.76□□□□□ -1.17
C9orf78-205ENST00000480023 FRAS1Q86XX4 4008 aa7.75□□□□□ -1.17
C9orf78-205ENST00000480023 KRTAP16-1A8MUX0 517 aa7.75□□□□□ -1.17
C9orf78-205ENST00000480023 RETNLBQ9BQ08 111 aa7.74□□□□□ -1.17
C9orf78-205ENST00000480023 NUPR2A6NF83 97 aa7.72□□□□□ -1.17
C9orf78-205ENST00000480023 PLECQ15149 4684 aaKnown RBP7.72□□□□□ -1.17
C9orf78-205ENST00000480023 IGKV2D-30A0A075B6S6 120 aa7.7□□□□□ -1.18
C9orf78-205ENST00000480023 CSAG1Q6PB30 78 aa7.7□□□□□ -1.18
C9orf78-205ENST00000480023 HECTD4Q9Y4D8 3996 aa7.7□□□□□ -1.18
C9orf78-205ENST00000480023 MGAM2Q2M2H8 2515 aa7.69□□□□□ -1.18
C9orf78-205ENST00000480023 VPS13DQ5THJ4 4388 aa7.65□□□□□ -1.18
C9orf78-205ENST00000480023 DNAH17Q9UFH2 4485 aa7.65□□□□□ -1.18
C9orf78-205ENST00000480023 KRTAP13-2Q52LG2 175 aa7.61□□□□□ -1.19
C9orf78-205ENST00000480023 H3BS24 57 aa7.6□□□□□ -1.19
C9orf78-205ENST00000480023 LY6G6CO95867 125 aa7.59□□□□□ -1.19
C9orf78-205ENST00000480023 A8MUU9 505 aa7.56□□□□□ -1.2
C9orf78-205ENST00000480023 FBN3Q75N90 2809 aa7.56□□□□□ -1.2
C9orf78-205ENST00000480023 MEGF8Q7Z7M0 2845 aa7.56□□□□□ -1.2
C9orf78-205ENST00000480023 STARD9Q9P2P6 4700 aa7.53□□□□□ -1.2
C9orf78-205ENST00000480023 H0YAA0 97 aa7.53□□□□□ -1.2
C9orf78-205ENST00000480023 Q6ZSA8 131 aa7.53□□□□□ -1.2
C9orf78-205ENST00000480023 DNAH2Q9P225 4427 aa7.53□□□□□ -1.2
C9orf78-205ENST00000480023 TGP01266 2768 aa7.53□□□□□ -1.2
C9orf78-205ENST00000480023 PRKDCP78527 4128 aaKnown RBP7.52□□□□□ -1.21
C9orf78-205ENST00000480023 SPINK1P00995 79 aa7.52□□□□□ -1.21
C9orf78-205ENST00000480023 KRTAP25-1Q3LHN0 102 aa7.49□□□□□ -1.21
C9orf78-205ENST00000480023 Q8N1X5 172 aa7.49□□□□□ -1.21
C9orf78-205ENST00000480023 C1orf134Q5TEV5 83 aa7.48□□□□□ -1.21
C9orf78-205ENST00000480023 KRTAP1-4P0C5Y4 121 aa7.48□□□□□ -1.21
C9orf78-205ENST00000480023 LINC00304Q8N9R0 145 aa7.48□□□□□ -1.21
C9orf78-205ENST00000480023 KMT2AQ03164 3969 aa7.46□□□□□ -1.22
C9orf78-205ENST00000480023 DNAH11Q96DT5 4516 aa7.46□□□□□ -1.22
C9orf78-205ENST00000480023 TYMSOSQ8TAI1 123 aa7.43□□□□□ -1.22
C9orf78-205ENST00000480023 A0A1B0GU33 70 aa7.42□□□□□ -1.22
C9orf78-205ENST00000480023 ROMO1P60602 79 aa7.4□□□□□ -1.22
C9orf78-205ENST00000480023 H1FX-AS1Q4G0G2 97 aa7.39□□□□□ -1.23
C9orf78-205ENST00000480023 DNAH6Q9C0G6 4158 aa7.39□□□□□ -1.23
C9orf78-205ENST00000480023 KRTAP10-2P60368 255 aa7.39□□□□□ -1.23
C9orf78-205ENST00000480023 DNAH5Q8TE73 4624 aa7.37□□□□□ -1.23
C9orf78-205ENST00000480023 RPS29P62273 56 aaKnown RBP7.35□□□□□ -1.23
C9orf78-205ENST00000480023 KRTAP3-1Q9BYR8 98 aa7.34□□□□□ -1.23
C9orf78-205ENST00000480023 LRP1BQ9NZR2 4599 aa7.33□□□□□ -1.24
C9orf78-205ENST00000480023 KRTAP10-1P60331 282 aa7.3□□□□□ -1.24
C9orf78-205ENST00000480023 C20orf166-AS1Q96NR2 134 aa7.3□□□□□ -1.24
C9orf78-205ENST00000480023 K7ERS5 55 aa7.28□□□□□ -1.24
C9orf78-205ENST00000480023 COX6B2Q6YFQ2 88 aa7.24□□□□□ -1.25
C9orf78-205ENST00000480023 VPS13BQ7Z7G8 4022 aa7.23□□□□□ -1.25
C9orf78-205ENST00000480023 PKD1P98161 4303 aa7.2□□□□□ -1.26
C9orf78-205ENST00000480023 FLG2Q5D862 2391 aaPredicted RBP7.18□□□□□ -1.26
C9orf78-205ENST00000480023 P0C880 135 aa7.18□□□□□ -1.26
C9orf78-205ENST00000480023 CRIPTQ9P021 101 aa7.16□□□□□ -1.26
C9orf78-205ENST00000480023 C9orf92A6NGG3 77 aa7.15□□□□□ -1.26
C9orf78-205ENST00000480023 FAT2Q9NYQ8 4349 aa7.12□□□□□ -1.27
C9orf78-205ENST00000480023 SACSQ9NZJ4 4579 aa7.12□□□□□ -1.27
C9orf78-205ENST00000480023 RPL37P61927 97 aaKnown RBP7.12□□□□□ -1.27
C9orf78-205ENST00000480023 KRTAP10-6P60371 365 aaPredicted RBP7.08□□□□□ -1.28
C9orf78-205ENST00000480023 TPRXLQ17RH7 258 aa7.04□□□□□ -1.28
C9orf78-205ENST00000480023 PKHD1L1Q86WI1 4243 aa7.03□□□□□ -1.28
C9orf78-205ENST00000480023 KRTAP13-4Q3LI77 160 aa7.03□□□□□ -1.28
C9orf78-205ENST00000480023 KRTAP3-3Q9BYR6 98 aa7.02□□□□□ -1.29
C9orf78-205ENST00000480023 KRTAP3-2Q9BYR7 98 aa7□□□□□ -1.29
C9orf78-205ENST00000480023 SPINT4Q6UDR6 99 aa6.98□□□□□ -1.29
C9orf78-205ENST00000480023 A0A0D9SG42 100 aa6.94□□□□□ -1.3
C9orf78-205ENST00000480023 HYDINQ4G0P3 5121 aa6.94□□□□□ -1.3
C9orf78-205ENST00000480023 KRTAP15-1Q3LI76 137 aa6.94□□□□□ -1.3
C9orf78-205ENST00000480023 PKHD1P08F94 4074 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms