RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 CDIP1Q9H305 208 aa6.51□□□□□ -1.37
TRAPPC12-219ENST00000479955 A0A1B0GVX0 72 aa6.49□□□□□ -1.37
TRAPPC12-219ENST00000479955 C8orf87E5RJ46 101 aa6.49□□□□□ -1.37
TRAPPC12-219ENST00000479955 K7ERU9 68 aa6.49□□□□□ -1.37
TRAPPC12-219ENST00000479955 LINC00313P59037 77 aa6.48□□□□□ -1.37
TRAPPC12-219ENST00000479955 IGHV6-1A0A0B4J1U7 121 aa6.47□□□□□ -1.37
TRAPPC12-219ENST00000479955 C9orf92A6NGG3 77 aa6.47□□□□□ -1.37
TRAPPC12-219ENST00000479955 CXCL6P80162 114 aa6.47□□□□□ -1.37
TRAPPC12-219ENST00000479955 DSCR10P59022 87 aa6.46□□□□□ -1.38
TRAPPC12-219ENST00000479955 PRR15Q8IV56 129 aa6.46□□□□□ -1.38
TRAPPC12-219ENST00000479955 IGKV3D-7A0A0C4DH55 119 aa6.45□□□□□ -1.38
TRAPPC12-219ENST00000479955 ATP5EP2Q5VTU8 51 aa6.45□□□□□ -1.38
TRAPPC12-219ENST00000479955 LINC00643Q86TS7 51 aa6.45□□□□□ -1.38
TRAPPC12-219ENST00000479955 HMCN2Q8NDA2 5059 aa6.44□□□□□ -1.38
TRAPPC12-219ENST00000479955 K7EQZ3 153 aa6.42□□□□□ -1.38
TRAPPC12-219ENST00000479955 XP32Q5T750 250 aa6.42□□□□□ -1.38
TRAPPC12-219ENST00000479955 C8orf17Q9NRJ1 99 aa6.41□□□□□ -1.38
TRAPPC12-219ENST00000479955 SEC61BP60468 96 aaKnown RBP6.38□□□□□ -1.39
TRAPPC12-219ENST00000479955 Q75L30 129 aa6.38□□□□□ -1.39
TRAPPC12-219ENST00000479955 NOTCH2NLQ7Z3S9 236 aa6.38□□□□□ -1.39
TRAPPC12-219ENST00000479955 Q8N9L7 120 aa6.37□□□□□ -1.39
TRAPPC12-219ENST00000479955 MMP24-AS1A0A0U1RRL7 71 aa6.36□□□□□ -1.39
TRAPPC12-219ENST00000479955 hDV103S1A0JD37 113 aa6.36□□□□□ -1.39
TRAPPC12-219ENST00000479955 KRTAP16-1A8MUX0 517 aa6.36□□□□□ -1.39
TRAPPC12-219ENST00000479955 RPL37P61927 97 aaKnown RBP6.36□□□□□ -1.39
TRAPPC12-219ENST00000479955 TMEM254Q8TBM7 123 aa6.36□□□□□ -1.39
TRAPPC12-219ENST00000479955 C20orf166-AS1Q96NR2 134 aa6.36□□□□□ -1.39
TRAPPC12-219ENST00000479955 LPAP08519 4548 aa6.36□□□□□ -1.39
TRAPPC12-219ENST00000479955 A8MUU9 505 aa6.35□□□□□ -1.39
TRAPPC12-219ENST00000479955 HIST1H4AP62805 103 aaKnown RBP6.35□□□□□ -1.39
TRAPPC12-219ENST00000479955 CASC2Q6XLA1 102 aa6.35□□□□□ -1.39
TRAPPC12-219ENST00000479955 MRPL34Q9BQ48 92 aaKnown RBP6.35□□□□□ -1.39
TRAPPC12-219ENST00000479955 HCG22E2RYF7 251 aa6.34□□□□□ -1.39
TRAPPC12-219ENST00000479955 ATP11AUNQ6ZP68 121 aa6.34□□□□□ -1.39
TRAPPC12-219ENST00000479955 Q8N9P0 234 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC12-219ENST00000479955 WFDC13Q8IUB5 93 aa6.32□□□□□ -1.4
TRAPPC12-219ENST00000479955 LRP2P98164 4655 aa6.31□□□□□ -1.4
TRAPPC12-219ENST00000479955 IMUPQ9GZP8 106 aa6.29□□□□□ -1.4
TRAPPC12-219ENST00000479955 NDUFS5O43920 106 aa6.28□□□□□ -1.4
TRAPPC12-219ENST00000479955 PCOTHQ58A44 107 aa6.28□□□□□ -1.4
TRAPPC12-219ENST00000479955 TP53AIP1Q9HCN2 124 aa6.25□□□□□ -1.41
TRAPPC12-219ENST00000479955 ZCCHC13Q8WW36 166 aaKnown RBP6.24□□□□□ -1.41
TRAPPC12-219ENST00000479955 A0A087WVE0 104 aa6.23□□□□□ -1.41
TRAPPC12-219ENST00000479955 MT-ATP8P03928 68 aa6.23□□□□□ -1.41
TRAPPC12-219ENST00000479955 SCGB1A1P11684 91 aa6.19□□□□□ -1.42
TRAPPC12-219ENST00000479955 MUC17Q685J3 4493 aa6.17□□□□□ -1.42
TRAPPC12-219ENST00000479955 UBR4Q5T4S7 5183 aa6.16□□□□□ -1.42
TRAPPC12-219ENST00000479955 UQCRQO14949 82 aa6.16□□□□□ -1.42
TRAPPC12-219ENST00000479955 Q5W150 140 aa6.14□□□□□ -1.43
TRAPPC12-219ENST00000479955 SMIM20Q8N5G0 67 aa6.13□□□□□ -1.43
TRAPPC12-219ENST00000479955 SPINK7P58062 85 aa6.12□□□□□ -1.43
TRAPPC12-219ENST00000479955 TRAV22A0A0B4J277 110 aa6.11□□□□□ -1.43
TRAPPC12-219ENST00000479955 A0A0U1RQV1 116 aa6.11□□□□□ -1.43
TRAPPC12-219ENST00000479955 FAM236AA0A1B0GUQ0 79 aa6.11□□□□□ -1.43
TRAPPC12-219ENST00000479955 FAM236BA0A1B0GV22 79 aa6.11□□□□□ -1.43
TRAPPC12-219ENST00000479955 ATOX1O00244 68 aa6.11□□□□□ -1.43
TRAPPC12-219ENST00000479955 KRTAP4-1Q9BYQ7 146 aa6.11□□□□□ -1.43
TRAPPC12-219ENST00000479955 OCR1Q9BZK8 76 aa6.11□□□□□ -1.43
TRAPPC12-219ENST00000479955 C5orf47Q569G3 176 aa6.09□□□□□ -1.43
TRAPPC12-219ENST00000479955 C7orf65Q6ZTY9 151 aa6.09□□□□□ -1.43
TRAPPC12-219ENST00000479955 MP68P56378 58 aa6.08□□□□□ -1.44
TRAPPC12-219ENST00000479955 IGKV2D-30A0A075B6S6 120 aa6.07□□□□□ -1.44
TRAPPC12-219ENST00000479955 H0Y9P7 68 aa6.07□□□□□ -1.44
TRAPPC12-219ENST00000479955 IGKV2-30P06310 120 aa6.07□□□□□ -1.44
TRAPPC12-219ENST00000479955 RNF213Q63HN8 5207 aa6.07□□□□□ -1.44
TRAPPC12-219ENST00000479955 LOC101927531A0A1B0GV80 90 aa6.06□□□□□ -1.44
TRAPPC12-219ENST00000479955 RBM12B-AS1Q9P1G2 102 aa6.06□□□□□ -1.44
TRAPPC12-219ENST00000479955 TRAV7A0A075B6U4 112 aa6.05□□□□□ -1.44
TRAPPC12-219ENST00000479955 H3BPC8 53 aa6.04□□□□□ -1.44
TRAPPC12-219ENST00000479955 MUC2Q02817 5179 aa6.03□□□□□ -1.44
TRAPPC12-219ENST00000479955 HRES1P13985 223 aa6.02□□□□□ -1.45
TRAPPC12-219ENST00000479955 C1orf64Q8NEQ6 169 aa6.02□□□□□ -1.45
TRAPPC12-219ENST00000479955 LCE2BO14633 110 aa6.01□□□□□ -1.45
TRAPPC12-219ENST00000479955 LINC00208Q96KT6 92 aa6.01□□□□□ -1.45
TRAPPC12-219ENST00000479955 CYP4F30PQ9H0H9 118 aa6.01□□□□□ -1.45
TRAPPC12-219ENST00000479955 COX6B2Q6YFQ2 88 aa6□□□□□ -1.45
TRAPPC12-219ENST00000479955 MPLKIPQ8TAP9 179 aa5.99□□□□□ -1.45
TRAPPC12-219ENST00000479955 FAM236DA0A1B0GTK5 79 aa5.98□□□□□ -1.45
TRAPPC12-219ENST00000479955 FAM236CP0DP71 79 aa5.98□□□□□ -1.45
TRAPPC12-219ENST00000479955 SERP2Q8N6R1 65 aa5.98□□□□□ -1.45
TRAPPC12-219ENST00000479955 KRTAP19-2Q3LHN2 52 aa5.93□□□□□ -1.46
TRAPPC12-219ENST00000479955 C4orf26Q17RF5 130 aa5.92□□□□□ -1.46
TRAPPC12-219ENST00000479955 COX7CP15954 63 aa5.9□□□□□ -1.46
TRAPPC12-219ENST00000479955 LCE2CQ5TA81 110 aa5.9□□□□□ -1.46
TRAPPC12-219ENST00000479955 ANAPC13Q9BS18 74 aa5.9□□□□□ -1.46
TRAPPC12-219ENST00000479955 KLKP1Q107X0 134 aa5.88□□□□□ -1.47
TRAPPC12-219ENST00000479955 H1FX-AS1Q4G0G2 97 aa5.88□□□□□ -1.47
TRAPPC12-219ENST00000479955 C20orf197Q8N268 126 aa5.88□□□□□ -1.47
TRAPPC12-219ENST00000479955 SNURFQ9Y675 71 aa5.85□□□□□ -1.47
TRAPPC12-219ENST00000479955 FAT4Q6V0I7 4981 aa5.85□□□□□ -1.47
TRAPPC12-219ENST00000479955 A8MUN3 132 aa5.84□□□□□ -1.47
TRAPPC12-219ENST00000479955 MT1HP80294 61 aa5.83□□□□□ -1.48
TRAPPC12-219ENST00000479955 M0R2T5 61 aa5.81□□□□□ -1.48
TRAPPC12-219ENST00000479955 NDUFC1O43677 76 aa5.81□□□□□ -1.48
TRAPPC12-219ENST00000479955 LCE2AQ5TA79 106 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC12-219ENST00000479955 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
TRAPPC12-219ENST00000479955 SPANXA2-OT1Q8N9U9 137 aa5.77□□□□□ -1.49
TRAPPC12-219ENST00000479955 S4R3F8 94 aa5.76□□□□□ -1.49
TRAPPC12-219ENST00000479955 DMAC1Q96GE9 116 aa5.75□□□□□ -1.49
TRAPPC12-219ENST00000479955 ACYP2P14621 99 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms