RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 SRRM2Q9UQ35 2752 aaKnown RBP11.55□□□□□ -0.56
TNFRSF8-204ENST00000479933 WWC2-AS2Q96NR7 200 aa11.52□□□□□ -0.57
TNFRSF8-204ENST00000479933 DNAH17Q9UFH2 4485 aa11.49□□□□□ -0.57
TNFRSF8-204ENST00000479933 LY6G6CO95867 125 aa11.48□□□□□ -0.57
TNFRSF8-204ENST00000479933 MEGF8Q7Z7M0 2845 aa11.48□□□□□ -0.57
TNFRSF8-204ENST00000479933 C8orf87E5RJ46 101 aa11.47□□□□□ -0.57
TNFRSF8-204ENST00000479933 Q96NJ1 140 aa11.47□□□□□ -0.57
TNFRSF8-204ENST00000479933 MMP24-AS1A0A0U1RRL7 71 aa11.46□□□□□ -0.57
TNFRSF8-204ENST00000479933 C4orf48Q5BLP8 95 aa11.46□□□□□ -0.57
TNFRSF8-204ENST00000479933 HECTD4Q9Y4D8 3996 aa11.45□□□□□ -0.58
TNFRSF8-204ENST00000479933 IGLV7-43P04211 117 aa11.44□□□□□ -0.58
TNFRSF8-204ENST00000479933 DNAH2Q9P225 4427 aa11.41□□□□□ -0.58
TNFRSF8-204ENST00000479933 SPINK7P58062 85 aa11.41□□□□□ -0.58
TNFRSF8-204ENST00000479933 SPAG11AQ6PDA7 123 aa11.41□□□□□ -0.58
TNFRSF8-204ENST00000479933 TP53AIP1Q9HCN2 124 aa11.4□□□□□ -0.58
TNFRSF8-204ENST00000479933 CDK2AP2O75956 126 aa11.39□□□□□ -0.59
TNFRSF8-204ENST00000479933 ASB16-AS1Q495Z4 193 aa11.39□□□□□ -0.59
TNFRSF8-204ENST00000479933 ANAPC11Q9NYG5 84 aa11.38□□□□□ -0.59
TNFRSF8-204ENST00000479933 C8orf17Q9NRJ1 99 aa11.37□□□□□ -0.59
TNFRSF8-204ENST00000479933 KMT2AQ03164 3969 aa11.37□□□□□ -0.59
TNFRSF8-204ENST00000479933 A0A1B0GVX0 72 aa11.36□□□□□ -0.59
TNFRSF8-204ENST00000479933 FBN3Q75N90 2809 aa11.34□□□□□ -0.59
TNFRSF8-204ENST00000479933 DNAH6Q9C0G6 4158 aa11.34□□□□□ -0.59
TNFRSF8-204ENST00000479933 A0A087X002 238 aa11.33□□□□□ -0.6
TNFRSF8-204ENST00000479933 LINC00313P59037 77 aa11.32□□□□□ -0.6
TNFRSF8-204ENST00000479933 CIRBP-AS1Q8TBR5 109 aa11.32□□□□□ -0.6
TNFRSF8-204ENST00000479933 DNAH8Q96JB1 4490 aa11.32□□□□□ -0.6
TNFRSF8-204ENST00000479933 HRES1P13985 223 aa11.32□□□□□ -0.6
TNFRSF8-204ENST00000479933 PCOTHQ58A44 107 aa11.32□□□□□ -0.6
TNFRSF8-204ENST00000479933 SSBP3-AS1Q7Z2R9 100 aa11.31□□□□□ -0.6
TNFRSF8-204ENST00000479933 DNHD1Q96M86 4753 aa11.31□□□□□ -0.6
TNFRSF8-204ENST00000479933 IGHV6-1A0A0B4J1U7 121 aa11.3□□□□□ -0.6
TNFRSF8-204ENST00000479933 KRTAP10-2P60368 255 aa11.3□□□□□ -0.6
TNFRSF8-204ENST00000479933 TGP01266 2768 aa11.3□□□□□ -0.6
TNFRSF8-204ENST00000479933 PLA2G1BP04054 148 aaKnown RBP11.29□□□□□ -0.6
TNFRSF8-204ENST00000479933 Q6ZSA8 131 aa11.26□□□□□ -0.61
TNFRSF8-204ENST00000479933 MRPL34Q9BQ48 92 aaKnown RBP11.26□□□□□ -0.61
TNFRSF8-204ENST00000479933 LINC01554Q52M75 96 aa11.22□□□□□ -0.61
TNFRSF8-204ENST00000479933 KRTAP21-3Q3LHN1 58 aa11.2□□□□□ -0.62
TNFRSF8-204ENST00000479933 ALMS1Q8TCU4 4167 aa11.2□□□□□ -0.62
TNFRSF8-204ENST00000479933 KRTAP10-1P60331 282 aa11.19□□□□□ -0.62
TNFRSF8-204ENST00000479933 PRAC1Q96KF2 57 aa11.18□□□□□ -0.62
TNFRSF8-204ENST00000479933 SPINK6Q6UWN8 80 aa11.17□□□□□ -0.62
TNFRSF8-204ENST00000479933 FRAS1Q86XX4 4008 aa11.16□□□□□ -0.62
TNFRSF8-204ENST00000479933 NOTCH2NLQ7Z3S9 236 aa11.15□□□□□ -0.62
TNFRSF8-204ENST00000479933 DNAH5Q8TE73 4624 aa11.15□□□□□ -0.63
TNFRSF8-204ENST00000479933 DNAH11Q96DT5 4516 aa11.13□□□□□ -0.63
TNFRSF8-204ENST00000479933 KRTAP13-2Q52LG2 175 aa11.09□□□□□ -0.63
TNFRSF8-204ENST00000479933 H3BS24 57 aa11.08□□□□□ -0.64
TNFRSF8-204ENST00000479933 SPATA8Q6RVD6 105 aa11.08□□□□□ -0.64
TNFRSF8-204ENST00000479933 ADM2Q7Z4H4 148 aa11.06□□□□□ -0.64
TNFRSF8-204ENST00000479933 PRR26Q8N8Z3 221 aa11.06□□□□□ -0.64
TNFRSF8-204ENST00000479933 ACYP2P14621 99 aa11.04□□□□□ -0.64
TNFRSF8-204ENST00000479933 PKD1P98161 4303 aa11.03□□□□□ -0.64
TNFRSF8-204ENST00000479933 KRTAP1-4P0C5Y4 121 aa11.02□□□□□ -0.65
TNFRSF8-204ENST00000479933 KRTAP13-3Q3SY46 172 aa11□□□□□ -0.65
TNFRSF8-204ENST00000479933 Q5W150 140 aa10.98□□□□□ -0.65
TNFRSF8-204ENST00000479933 FAT2Q9NYQ8 4349 aa10.98□□□□□ -0.65
TNFRSF8-204ENST00000479933 DMAC1Q96GE9 116 aa10.96□□□□□ -0.66
TNFRSF8-204ENST00000479933 A0A1B0GU69 56 aa10.94□□□□□ -0.66
TNFRSF8-204ENST00000479933 LRP1BQ9NZR2 4599 aa10.94□□□□□ -0.66
TNFRSF8-204ENST00000479933 FAM229AH3BQW9 127 aa10.94□□□□□ -0.66
TNFRSF8-204ENST00000479933 HYDINQ4G0P3 5121 aa10.93□□□□□ -0.66
TNFRSF8-204ENST00000479933 TYMSOSQ8TAI1 123 aa10.91□□□□□ -0.66
TNFRSF8-204ENST00000479933 RETNLBQ9BQ08 111 aa10.91□□□□□ -0.66
TNFRSF8-204ENST00000479933 MIR22HGQ0VDD5 57 aa10.9□□□□□ -0.66
TNFRSF8-204ENST00000479933 SPINK1P00995 79 aa10.9□□□□□ -0.67
TNFRSF8-204ENST00000479933 UQCR11O14957 56 aa10.89□□□□□ -0.67
TNFRSF8-204ENST00000479933 KRTAP16-1A8MUX0 517 aa10.85□□□□□ -0.67
TNFRSF8-204ENST00000479933 RPS29P62273 56 aaKnown RBP10.82□□□□□ -0.68
TNFRSF8-204ENST00000479933 CSAG1Q6PB30 78 aa10.81□□□□□ -0.68
TNFRSF8-204ENST00000479933 IGKV2-30P06310 120 aa10.79□□□□□ -0.68
TNFRSF8-204ENST00000479933 VPS13BQ7Z7G8 4022 aa10.79□□□□□ -0.68
TNFRSF8-204ENST00000479933 LINC00304Q8N9R0 145 aa10.77□□□□□ -0.69
TNFRSF8-204ENST00000479933 A0A1B0GVY2 172 aa10.72□□□□□ -0.69
TNFRSF8-204ENST00000479933 SACSQ9NZJ4 4579 aa10.7□□□□□ -0.7
TNFRSF8-204ENST00000479933 SMR3BP02814 79 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF8-204ENST00000479933 IGKV2D-30A0A075B6S6 120 aa10.62□□□□□ -0.71
TNFRSF8-204ENST00000479933 PKHD1P08F94 4074 aa10.62□□□□□ -0.71
TNFRSF8-204ENST00000479933 DYNC1H1Q14204 4646 aaKnown RBP10.6□□□□□ -0.71
TNFRSF8-204ENST00000479933 KRTAP10-4P60372 401 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF8-204ENST00000479933 KRTAP25-1Q3LHN0 102 aa10.52□□□□□ -0.72
TNFRSF8-204ENST00000479933 ROMO1P60602 79 aa10.5□□□□□ -0.73
TNFRSF8-204ENST00000479933 A8MUU9 505 aa10.48□□□□□ -0.73
TNFRSF8-204ENST00000479933 APOBP04114 4563 aaKnown RBP10.47□□□□□ -0.73
TNFRSF8-204ENST00000479933 C20orf166-AS1Q96NR2 134 aa10.47□□□□□ -0.73
TNFRSF8-204ENST00000479933 PKHD1L1Q86WI1 4243 aa10.42□□□□□ -0.74
TNFRSF8-204ENST00000479933 C9orf92A6NGG3 77 aa10.41□□□□□ -0.74
TNFRSF8-204ENST00000479933 RYR2Q92736 4967 aa10.41□□□□□ -0.74
TNFRSF8-204ENST00000479933 FAT1Q14517 4588 aa10.37□□□□□ -0.75
TNFRSF8-204ENST00000479933 H0YAA0 97 aa10.34□□□□□ -0.75
TNFRSF8-204ENST00000479933 Q8N1X5 172 aa10.32□□□□□ -0.76
TNFRSF8-204ENST00000479933 KRTAP10-8P60410 259 aa10.24□□□□□ -0.77
TNFRSF8-204ENST00000479933 FLG2Q5D862 2391 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF8-204ENST00000479933 Q5VSD8 79 aa10.21□□□□□ -0.77
TNFRSF8-204ENST00000479933 KMT2CQ8NEZ4 4911 aaKnown RBP10.18□□□□□ -0.78
TNFRSF8-204ENST00000479933 A0A1B0GU33 70 aa10.16□□□□□ -0.78
TNFRSF8-204ENST00000479933 P0C880 135 aa10.16□□□□□ -0.78
TNFRSF8-204ENST00000479933 H1FX-AS1Q4G0G2 97 aa10.13□□□□□ -0.79
TNFRSF8-204ENST00000479933 KRTAP3-1Q9BYR8 98 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms