RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 Q96NJ1 140 aa4.94□□□□□ -1.62
DDX56-211ENST00000479602 CDIP1Q9H305 208 aa4.94□□□□□ -1.62
DDX56-211ENST00000479602 A0A0G2JQZ4 141 aa4.93□□□□□ -1.62
DDX56-211ENST00000479602 LINC00472Q9H8W2 130 aa4.93□□□□□ -1.62
DDX56-211ENST00000479602 FAM240AA0A1B0GVK7 77 aa4.92□□□□□ -1.62
DDX56-211ENST00000479602 J3KT08 172 aa4.92□□□□□ -1.62
DDX56-211ENST00000479602 KRTAP4-1Q9BYQ7 146 aa4.92□□□□□ -1.62
DDX56-211ENST00000479602 FSIP2Q5CZC0 6907 aa4.91□□□□□ -1.62
DDX56-211ENST00000479602 HRCT1Q6UXD1 115 aa4.91□□□□□ -1.62
DDX56-211ENST00000479602 UBL5Q9BZL1 73 aa4.91□□□□□ -1.62
DDX56-211ENST00000479602 XP32Q5T750 250 aa4.9□□□□□ -1.63
DDX56-211ENST00000479602 MT-ATP8P03928 68 aa4.88□□□□□ -1.63
DDX56-211ENST00000479602 NREPQ16612 68 aa4.88□□□□□ -1.63
DDX56-211ENST00000479602 SVIPQ8NHG7 77 aa4.88□□□□□ -1.63
DDX56-211ENST00000479602 LCE2CQ5TA81 110 aa4.86□□□□□ -1.63
DDX56-211ENST00000479602 C8orf87E5RJ46 101 aa4.85□□□□□ -1.63
DDX56-211ENST00000479602 KRTAP19-2Q3LHN2 52 aa4.85□□□□□ -1.63
DDX56-211ENST00000479602 ATP5EP2Q5VTU8 51 aa4.84□□□□□ -1.63
DDX56-211ENST00000479602 A8MWP4 228 aa4.83□□□□□ -1.64
DDX56-211ENST00000479602 Q75L30 129 aa4.83□□□□□ -1.64
DDX56-211ENST00000479602 C20orf166-AS1Q96NR2 134 aa4.83□□□□□ -1.64
DDX56-211ENST00000479602 NDUFB1O75438 58 aa4.82□□□□□ -1.64
DDX56-211ENST00000479602 IGKV4-1P06312 121 aa4.82□□□□□ -1.64
DDX56-211ENST00000479602 LINC00643Q86TS7 51 aa4.82□□□□□ -1.64
DDX56-211ENST00000479602 ANAPC13Q9BS18 74 aa4.82□□□□□ -1.64
DDX56-211ENST00000479602 LINC00846Q9NV44 126 aa4.82□□□□□ -1.64
DDX56-211ENST00000479602 A0A1B0GVX0 72 aa4.81□□□□□ -1.64
DDX56-211ENST00000479602 BPY2O14599 106 aa4.81□□□□□ -1.64
DDX56-211ENST00000479602 SEC61BP60468 96 aaKnown RBP4.81□□□□□ -1.64
DDX56-211ENST00000479602 Q6ZVQ6 151 aa4.81□□□□□ -1.64
DDX56-211ENST00000479602 IMUPQ9GZP8 106 aa4.81□□□□□ -1.64
DDX56-211ENST00000479602 A8MUU9 505 aa4.8□□□□□ -1.64
DDX56-211ENST00000479602 RPL37P61927 97 aaKnown RBP4.8□□□□□ -1.64
DDX56-211ENST00000479602 CXCL6P80162 114 aa4.8□□□□□ -1.64
DDX56-211ENST00000479602 KRTAP16-1A8MUX0 517 aa4.79□□□□□ -1.64
DDX56-211ENST00000479602 PRR15Q8IV56 129 aa4.79□□□□□ -1.64
DDX56-211ENST00000479602 FLGP20930 4061 aaPredicted RBP4.78□□□□□ -1.64
DDX56-211ENST00000479602 DSCR10P59022 87 aa4.78□□□□□ -1.64
DDX56-211ENST00000479602 CRCT1Q9UGL9 99 aa4.78□□□□□ -1.64
DDX56-211ENST00000479602 IGKV3D-7A0A0C4DH55 119 aa4.77□□□□□ -1.65
DDX56-211ENST00000479602 LINC00313P59037 77 aa4.77□□□□□ -1.65
DDX56-211ENST00000479602 Q8N9P0 234 aaPredicted RBP4.77□□□□□ -1.65
DDX56-211ENST00000479602 C9orf92A6NGG3 77 aa4.74□□□□□ -1.65
DDX56-211ENST00000479602 MT1HP80294 61 aa4.74□□□□□ -1.65
DDX56-211ENST00000479602 TMEM254Q8TBM7 123 aa4.74□□□□□ -1.65
DDX56-211ENST00000479602 C8orf17Q9NRJ1 99 aa4.74□□□□□ -1.65
DDX56-211ENST00000479602 IGHV6-1A0A0B4J1U7 121 aa4.73□□□□□ -1.65
DDX56-211ENST00000479602 MMP24-AS1A0A0U1RRL7 71 aa4.73□□□□□ -1.65
DDX56-211ENST00000479602 K7EQZ3 153 aa4.73□□□□□ -1.65
DDX56-211ENST00000479602 HIST1H4AP62805 103 aaKnown RBP4.73□□□□□ -1.65
DDX56-211ENST00000479602 DEFB116Q30KQ4 102 aa4.73□□□□□ -1.65
DDX56-211ENST00000479602 LORP23490 312 aaPredicted RBP4.72□□□□□ -1.65
DDX56-211ENST00000479602 NOTCH2NLQ7Z3S9 236 aa4.71□□□□□ -1.66
DDX56-211ENST00000479602 CCDC179H3BU77 68 aa4.7□□□□□ -1.66
DDX56-211ENST00000479602 hDV103S1A0JD37 113 aa4.69□□□□□ -1.66
DDX56-211ENST00000479602 ATP11AUNQ6ZP68 121 aa4.69□□□□□ -1.66
DDX56-211ENST00000479602 MRPL34Q9BQ48 92 aaKnown RBP4.69□□□□□ -1.66
DDX56-211ENST00000479602 FAM236AA0A1B0GUQ0 79 aa4.68□□□□□ -1.66
DDX56-211ENST00000479602 FAM236BA0A1B0GV22 79 aa4.68□□□□□ -1.66
DDX56-211ENST00000479602 UQCRQO14949 82 aa4.68□□□□□ -1.66
DDX56-211ENST00000479602 PCOTHQ58A44 107 aa4.68□□□□□ -1.66
DDX56-211ENST00000479602 HCG22E2RYF7 251 aa4.67□□□□□ -1.66
DDX56-211ENST00000479602 ATOX1O00244 68 aa4.67□□□□□ -1.66
DDX56-211ENST00000479602 KRTAP10-6P60371 365 aaPredicted RBP4.67□□□□□ -1.66
DDX56-211ENST00000479602 COX7CP15954 63 aa4.65□□□□□ -1.67
DDX56-211ENST00000479602 CASC2Q6XLA1 102 aa4.65□□□□□ -1.67
DDX56-211ENST00000479602 SMIM20Q8N5G0 67 aa4.65□□□□□ -1.67
DDX56-211ENST00000479602 ZCCHC13Q8WW36 166 aaKnown RBP4.65□□□□□ -1.67
DDX56-211ENST00000479602 SSPOA2VEC9 5147 aa4.63□□□□□ -1.67
DDX56-211ENST00000479602 Q8N9L7 120 aa4.63□□□□□ -1.67
DDX56-211ENST00000479602 TP53AIP1Q9HCN2 124 aa4.63□□□□□ -1.67
DDX56-211ENST00000479602 USH2AO75445 5202 aa4.62□□□□□ -1.67
DDX56-211ENST00000479602 NDUFS5O43920 106 aa4.61□□□□□ -1.67
DDX56-211ENST00000479602 WFDC13Q8IUB5 93 aa4.61□□□□□ -1.67
DDX56-211ENST00000479602 SERP2Q8N6R1 65 aa4.61□□□□□ -1.67
DDX56-211ENST00000479602 MPLKIPQ8TAP9 179 aa4.61□□□□□ -1.67
DDX56-211ENST00000479602 A0A087WVE0 104 aa4.6□□□□□ -1.67
DDX56-211ENST00000479602 RPS28P62857 69 aaKnown RBP4.59□□□□□ -1.67
DDX56-211ENST00000479602 TMEM258P61165 79 aa4.58□□□□□ -1.68
DDX56-211ENST00000479602 HRES1P13985 223 aa4.55□□□□□ -1.68
DDX56-211ENST00000479602 MP68P56378 58 aa4.54□□□□□ -1.68
DDX56-211ENST00000479602 C5orf47Q569G3 176 aa4.54□□□□□ -1.68
DDX56-211ENST00000479602 TRAV7A0A075B6U4 112 aa4.53□□□□□ -1.68
DDX56-211ENST00000479602 SPINK7P58062 85 aa4.53□□□□□ -1.68
DDX56-211ENST00000479602 Q5W150 140 aa4.53□□□□□ -1.68
DDX56-211ENST00000479602 C7orf65Q6ZTY9 151 aa4.53□□□□□ -1.68
DDX56-211ENST00000479602 H3BPC8 53 aa4.52□□□□□ -1.69
DDX56-211ENST00000479602 OCR1Q9BZK8 76 aa4.52□□□□□ -1.69
DDX56-211ENST00000479602 TRAV22A0A0B4J277 110 aa4.51□□□□□ -1.69
DDX56-211ENST00000479602 H3BS24 57 aa4.51□□□□□ -1.69
DDX56-211ENST00000479602 KRTAP9-8Q9BYQ0 159 aa4.51□□□□□ -1.69
DDX56-211ENST00000479602 FCGBPQ9Y6R7 5405 aaPredicted RBP4.5□□□□□ -1.69
DDX56-211ENST00000479602 M0R2T5 61 aa4.5□□□□□ -1.69
DDX56-211ENST00000479602 LOC101927531A0A1B0GV80 90 aa4.49□□□□□ -1.69
DDX56-211ENST00000479602 IGKV2-30P06310 120 aa4.49□□□□□ -1.69
DDX56-211ENST00000479602 RBM12B-AS1Q9P1G2 102 aa4.49□□□□□ -1.69
DDX56-211ENST00000479602 NDUFC1O43677 76 aa4.48□□□□□ -1.69
DDX56-211ENST00000479602 H0Y9P7 68 aa4.47□□□□□ -1.69
DDX56-211ENST00000479602 KLKP1Q107X0 134 aa4.47□□□□□ -1.69
DDX56-211ENST00000479602 COX6B2Q6YFQ2 88 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms