RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 Q1T7F1 81 aa6.42□□□□□ -1.38
VPS52-217ENST00000478934 C8orf17Q9NRJ1 99 aa6.41□□□□□ -1.38
VPS52-217ENST00000478934 CD164Q04900 197 aa6.39□□□□□ -1.39
VPS52-217ENST00000478934 CIRBP-AS1Q8TBR5 109 aa6.39□□□□□ -1.39
VPS52-217ENST00000478934 ZNF706Q9Y5V0 76 aaPredicted RBP6.39□□□□□ -1.39
VPS52-217ENST00000478934 IGLV7-43P04211 117 aa6.38□□□□□ -1.39
VPS52-217ENST00000478934 PKD1P98161 4303 aa6.38□□□□□ -1.39
VPS52-217ENST00000478934 A0A1B0GVX0 72 aa6.38□□□□□ -1.39
VPS52-217ENST00000478934 CDK2AP2O75956 126 aa6.36□□□□□ -1.39
VPS52-217ENST00000478934 ASB16-AS1Q495Z4 193 aa6.36□□□□□ -1.39
VPS52-217ENST00000478934 FAT2Q9NYQ8 4349 aa6.36□□□□□ -1.39
VPS52-217ENST00000478934 H3BPC8 53 aa6.36□□□□□ -1.39
VPS52-217ENST00000478934 SPANXA2-OT1Q8N9U9 137 aa6.36□□□□□ -1.39
VPS52-217ENST00000478934 COA5Q86WW8 74 aa6.35□□□□□ -1.39
VPS52-217ENST00000478934 Q8N9P0 234 aaPredicted RBP6.34□□□□□ -1.39
VPS52-217ENST00000478934 Q5VV11 94 aa6.34□□□□□ -1.39
VPS52-217ENST00000478934 PRR15LQ9BU68 103 aa6.33□□□□□ -1.4
VPS52-217ENST00000478934 MRPL34Q9BQ48 92 aaKnown RBP6.33□□□□□ -1.4
VPS52-217ENST00000478934 IGLV7-46A0A075B6I9 117 aa6.32□□□□□ -1.4
VPS52-217ENST00000478934 KRTAP10-1P60331 282 aa6.32□□□□□ -1.4
VPS52-217ENST00000478934 Q5W150 140 aa6.32□□□□□ -1.4
VPS52-217ENST00000478934 VPS13BQ7Z7G8 4022 aa6.32□□□□□ -1.4
VPS52-217ENST00000478934 C1orf195Q5TG92 126 aa6.31□□□□□ -1.4
VPS52-217ENST00000478934 RETNLBQ9BQ08 111 aa6.31□□□□□ -1.4
VPS52-217ENST00000478934 CHKB-CPT1BH3BT56 60 aa6.31□□□□□ -1.4
VPS52-217ENST00000478934 SPAG11AQ6PDA7 123 aa6.3□□□□□ -1.4
VPS52-217ENST00000478934 TP53AIP1Q9HCN2 124 aa6.3□□□□□ -1.4
VPS52-217ENST00000478934 PKHD1P08F94 4074 aa6.29□□□□□ -1.4
VPS52-217ENST00000478934 KRTAP13-2Q52LG2 175 aa6.28□□□□□ -1.4
VPS52-217ENST00000478934 HRES1P13985 223 aa6.26□□□□□ -1.41
VPS52-217ENST00000478934 V9GYY9 64 aa6.26□□□□□ -1.41
VPS52-217ENST00000478934 LIMD2Q9BT23 127 aa6.24□□□□□ -1.41
VPS52-217ENST00000478934 PRR26Q8N8Z3 221 aa6.23□□□□□ -1.41
VPS52-217ENST00000478934 A6NED7 52 aa6.22□□□□□ -1.41
VPS52-217ENST00000478934 SSBP3-AS1Q7Z2R9 100 aa6.22□□□□□ -1.41
VPS52-217ENST00000478934 SPTSSBQ8NFR3 76 aa6.22□□□□□ -1.41
VPS52-217ENST00000478934 Q6ZSA8 131 aa6.22□□□□□ -1.41
VPS52-217ENST00000478934 KRTAP13-3Q3SY46 172 aa6.21□□□□□ -1.42
VPS52-217ENST00000478934 LCA10Q71F78 164 aa6.21□□□□□ -1.42
VPS52-217ENST00000478934 KRTAP1-4P0C5Y4 121 aa6.19□□□□□ -1.42
VPS52-217ENST00000478934 SACSQ9NZJ4 4579 aa6.18□□□□□ -1.42
VPS52-217ENST00000478934 PMAIP1Q13794 54 aa6.18□□□□□ -1.42
VPS52-217ENST00000478934 LINC00313P59037 77 aa6.17□□□□□ -1.42
VPS52-217ENST00000478934 LOC101927531A0A1B0GV80 90 aa6.17□□□□□ -1.42
VPS52-217ENST00000478934 Q75L30 129 aa6.17□□□□□ -1.42
VPS52-217ENST00000478934 SPINK7P58062 85 aa6.16□□□□□ -1.42
VPS52-217ENST00000478934 PLA2G1BP04054 148 aaKnown RBP6.14□□□□□ -1.43
VPS52-217ENST00000478934 FAT1Q14517 4588 aa6.14□□□□□ -1.43
VPS52-217ENST00000478934 LINC01558Q9Y6Z2 57 aa6.14□□□□□ -1.43
VPS52-217ENST00000478934 DYNC1H1Q14204 4646 aaKnown RBP6.14□□□□□ -1.43
VPS52-217ENST00000478934 SMR3BP02814 79 aaPredicted RBP6.13□□□□□ -1.43
VPS52-217ENST00000478934 C8orf87E5RJ46 101 aa6.12□□□□□ -1.43
VPS52-217ENST00000478934 KRTAP16-1A8MUX0 517 aa6.11□□□□□ -1.43
VPS52-217ENST00000478934 IGKV2D-30A0A075B6S6 120 aa6.1□□□□□ -1.43
VPS52-217ENST00000478934 IGKV2-30P06310 120 aa6.1□□□□□ -1.43
VPS52-217ENST00000478934 TYMSOSQ8TAI1 123 aa6.1□□□□□ -1.43
VPS52-217ENST00000478934 ACYP2P14621 99 aa6.08□□□□□ -1.44
VPS52-217ENST00000478934 FAM229AH3BQW9 127 aa6.07□□□□□ -1.44
VPS52-217ENST00000478934 CDC42SE1Q9NRR8 79 aa6.07□□□□□ -1.44
VPS52-217ENST00000478934 C4orf48Q5BLP8 95 aa6.06□□□□□ -1.44
VPS52-217ENST00000478934 DMAC1Q96GE9 116 aa6.05□□□□□ -1.44
VPS52-217ENST00000478934 ATP11AUNQ6ZP68 121 aa6.04□□□□□ -1.44
VPS52-217ENST00000478934 APOBP04114 4563 aaKnown RBP6.03□□□□□ -1.44
VPS52-217ENST00000478934 KMT2CQ8NEZ4 4911 aaKnown RBP6.02□□□□□ -1.45
VPS52-217ENST00000478934 SEC61GP60059 68 aa6.02□□□□□ -1.45
VPS52-217ENST00000478934 A6NN06 94 aa6.01□□□□□ -1.45
VPS52-217ENST00000478934 SPINK1P00995 79 aa6□□□□□ -1.45
VPS52-217ENST00000478934 C7orf65Q6ZTY9 151 aa5.99□□□□□ -1.45
VPS52-217ENST00000478934 LINC00304Q8N9R0 145 aa5.99□□□□□ -1.45
VPS52-217ENST00000478934 A0A1B0GU69 56 aa5.98□□□□□ -1.45
VPS52-217ENST00000478934 Q8N1X5 172 aa5.98□□□□□ -1.45
VPS52-217ENST00000478934 RYR2Q92736 4967 aa5.98□□□□□ -1.45
VPS52-217ENST00000478934 C9orf92A6NGG3 77 aa5.98□□□□□ -1.45
VPS52-217ENST00000478934 KTN1-AS1Q86SY8 53 aa5.97□□□□□ -1.45
VPS52-217ENST00000478934 PKHD1L1Q86WI1 4243 aa5.94□□□□□ -1.46
VPS52-217ENST00000478934 A0A1B0GVY2 172 aa5.94□□□□□ -1.46
VPS52-217ENST00000478934 KRTAP10-4P60372 401 aaPredicted RBP5.94□□□□□ -1.46
VPS52-217ENST00000478934 LRP1Q07954 4544 aaKnown RBP5.93□□□□□ -1.46
VPS52-217ENST00000478934 RBM12B-AS1Q9P1G2 102 aa5.9□□□□□ -1.47
VPS52-217ENST00000478934 KRTAP21-3Q3LHN1 58 aa5.89□□□□□ -1.47
VPS52-217ENST00000478934 ADM2Q7Z4H4 148 aa5.89□□□□□ -1.47
VPS52-217ENST00000478934 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
VPS52-217ENST00000478934 MIR22HGQ0VDD5 57 aa5.86□□□□□ -1.47
VPS52-217ENST00000478934 UQCR11O14957 56 aa5.84□□□□□ -1.47
VPS52-217ENST00000478934 RPS29P62273 56 aaKnown RBP5.84□□□□□ -1.47
VPS52-217ENST00000478934 FLG2Q5D862 2391 aaPredicted RBP5.84□□□□□ -1.47
VPS52-217ENST00000478934 SPATA8Q6RVD6 105 aa5.83□□□□□ -1.48
VPS52-217ENST00000478934 MYCBP2O75592 4640 aa5.83□□□□□ -1.48
VPS52-217ENST00000478934 RYR3Q15413 4870 aa5.82□□□□□ -1.48
VPS52-217ENST00000478934 A8MUU9 505 aa5.81□□□□□ -1.48
VPS52-217ENST00000478934 KRTAP3-1Q9BYR8 98 aa5.81□□□□□ -1.48
VPS52-217ENST00000478934 TNXBP22105 4242 aa5.81□□□□□ -1.48
VPS52-217ENST00000478934 FAT3Q8TDW7 4589 aa5.81□□□□□ -1.48
VPS52-217ENST00000478934 C20orf166-AS1Q96NR2 134 aa5.8□□□□□ -1.48
VPS52-217ENST00000478934 HSPG2P98160 4391 aa5.8□□□□□ -1.48
VPS52-217ENST00000478934 DMBT1Q9UGM3 2413 aaPredicted RBP5.79□□□□□ -1.48
VPS52-217ENST00000478934 KRTAP17-1Q9BYP8 105 aa5.77□□□□□ -1.49
VPS52-217ENST00000478934 KIAA1109Q2LD37 5005 aa5.73□□□□□ -1.49
VPS52-217ENST00000478934 H0YAA0 97 aa5.71□□□□□ -1.5
VPS52-217ENST00000478934 RYR1P21817 5038 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms