RNA–Protein interactions for RNA: ENST00000478696.5

GARNL3-214, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-214ENST00000478696 ATP5EP2Q5VTU8 51 aa0.55□□□□□ -2.32
GARNL3-214ENST00000478696 SPINK6Q6UWN8 80 aa0.55□□□□□ -2.32
GARNL3-214ENST00000478696 KRTAP19-3Q7Z4W3 81 aa0.55□□□□□ -2.32
GARNL3-214ENST00000478696 STAB2Q8WWQ8 2551 aa0.54□□□□□ -2.32
GARNL3-214ENST00000478696 SVEP1Q4LDE5 3571 aa0.54□□□□□ -2.32
GARNL3-214ENST00000478696 RYR1P21817 5038 aa0.54□□□□□ -2.32
GARNL3-214ENST00000478696 A0A087WXM4 84 aa0.54□□□□□ -2.32
GARNL3-214ENST00000478696 LOC730098B7Z3J9 87 aa0.54□□□□□ -2.32
GARNL3-214ENST00000478696 COX8AP10176 69 aa0.54□□□□□ -2.32
GARNL3-214ENST00000478696 COX7BP24311 80 aa0.54□□□□□ -2.32
GARNL3-214ENST00000478696 SRRM2Q9UQ35 2752 aaKnown RBP0.54□□□□□ -2.32
GARNL3-214ENST00000478696 DUOX1Q9NRD9 1551 aa0.53□□□□□ -2.32
GARNL3-214ENST00000478696 FRAS1Q86XX4 4008 aa0.53□□□□□ -2.32
GARNL3-214ENST00000478696 DMBT1Q9UGM3 2413 aaPredicted RBP0.53□□□□□ -2.32
GARNL3-214ENST00000478696 GPR98Q8WXG9 6306 aa0.53□□□□□ -2.32
GARNL3-214ENST00000478696 SPTY2D1-AS1A0A0U1RR47 76 aa0.53□□□□□ -2.32
GARNL3-214ENST00000478696 UMAD1C9J7I0 102 aa0.53□□□□□ -2.32
GARNL3-214ENST00000478696 I3L3M4 83 aa0.53□□□□□ -2.32
GARNL3-214ENST00000478696 IFI27P40305 119 aaPredicted RBP0.53□□□□□ -2.32
GARNL3-214ENST00000478696 DEFA5Q01523 94 aa0.53□□□□□ -2.32
GARNL3-214ENST00000478696 Q5VSD8 79 aa0.53□□□□□ -2.32
GARNL3-214ENST00000478696 DEFB124Q8NES8 71 aa0.53□□□□□ -2.32
GARNL3-214ENST00000478696 WFDC9Q8NEX5 89 aa0.53□□□□□ -2.32
GARNL3-214ENST00000478696 SMR3AQ99954 134 aa0.53□□□□□ -2.32
GARNL3-214ENST00000478696 BSNQ9UPA5 3926 aa0.53□□□□□ -2.32
GARNL3-214ENST00000478696 PRKDCP78527 4128 aaKnown RBP0.52□□□□□ -2.33
GARNL3-214ENST00000478696 USF3Q68DE3 2245 aa0.52□□□□□ -2.33
GARNL3-214ENST00000478696 RYR3Q15413 4870 aa0.52□□□□□ -2.33
GARNL3-214ENST00000478696 CSMD3Q7Z407 3707 aa0.52□□□□□ -2.33
GARNL3-214ENST00000478696 NFAT5O94916 1531 aa0.52□□□□□ -2.33
GARNL3-214ENST00000478696 KMT2CQ8NEZ4 4911 aaKnown RBP0.52□□□□□ -2.33
GARNL3-214ENST00000478696 PCLOQ9Y6V0 5065 aa0.52□□□□□ -2.33
GARNL3-214ENST00000478696 UBR4Q5T4S7 5183 aa0.51□□□□□ -2.33
GARNL3-214ENST00000478696 CPSF4LA6NMK7 179 aaKnown RBP0.51□□□□□ -2.33
GARNL3-214ENST00000478696 IFI6P09912 130 aa0.51□□□□□ -2.33
GARNL3-214ENST00000478696 RPL38P63173 70 aaKnown RBP0.51□□□□□ -2.33
GARNL3-214ENST00000478696 ANKRD36CQ5JPF3 1778 aa0.51□□□□□ -2.33
GARNL3-214ENST00000478696 BIRC6Q9NR09 4857 aa0.5□□□□□ -2.33
GARNL3-214ENST00000478696 CD163L1Q9NR16 1453 aa0.5□□□□□ -2.33
GARNL3-214ENST00000478696 ANKRD50Q9ULJ7 1429 aa0.5□□□□□ -2.33
GARNL3-214ENST00000478696 PRH1P02810 166 aa0.5□□□□□ -2.33
GARNL3-214ENST00000478696 HMGA1P17096 107 aaKnown RBP0.5□□□□□ -2.33
GARNL3-214ENST00000478696 SPRR1BP22528 89 aa0.5□□□□□ -2.33
GARNL3-214ENST00000478696 SPRR1AP35321 89 aa0.5□□□□□ -2.33
GARNL3-214ENST00000478696 Q5BKY6 102 aa0.5□□□□□ -2.33
GARNL3-214ENST00000478696 WNK2Q9Y3S1 2297 aa0.5□□□□□ -2.33
GARNL3-214ENST00000478696 MUC5ACP98088 5654 aa0.5□□□□□ -2.33
GARNL3-214ENST00000478696 EPPK1P58107 5090 aaKnown RBP0.5□□□□□ -2.33
GARNL3-214ENST00000478696 TRRAPQ9Y4A5 3859 aa0.5□□□□□ -2.33
GARNL3-214ENST00000478696 ANK2Q01484 3957 aa0.49□□□□□ -2.33
GARNL3-214ENST00000478696 HYDINQ4G0P3 5121 aa0.49□□□□□ -2.33
GARNL3-214ENST00000478696 CCL22O00626 93 aa0.49□□□□□ -2.33
GARNL3-214ENST00000478696 KRTAP2-3P0C7H8 128 aa0.49□□□□□ -2.33
GARNL3-214ENST00000478696 MRPL34Q9BQ48 92 aaKnown RBP0.49□□□□□ -2.33
GARNL3-214ENST00000478696 KRTAP2-4Q9BYR9 128 aa0.49□□□□□ -2.33
GARNL3-214ENST00000478696 KRTAP2-1Q9BYU5 128 aa0.49□□□□□ -2.33
GARNL3-214ENST00000478696 HRNRQ86YZ3 2850 aaPredicted RBP0.48□□□□□ -2.33
GARNL3-214ENST00000478696 KIF20BQ96Q89 1820 aa0.48□□□□□ -2.33
GARNL3-214ENST00000478696 SPINK1P00995 79 aa0.48□□□□□ -2.33
GARNL3-214ENST00000478696 KIAA1109Q2LD37 5005 aa0.48□□□□□ -2.33
GARNL3-214ENST00000478696 KMT2AQ03164 3969 aa0.48□□□□□ -2.33
GARNL3-214ENST00000478696 TNCP24821 2201 aa0.48□□□□□ -2.33
GARNL3-214ENST00000478696 RYR2Q92736 4967 aa0.47□□□□□ -2.33
GARNL3-214ENST00000478696 HECTD4Q9Y4D8 3996 aa0.47□□□□□ -2.33
GARNL3-214ENST00000478696 LCE6AA0A183 80 aa0.47□□□□□ -2.33
GARNL3-214ENST00000478696 SPINK4O60575 86 aa0.47□□□□□ -2.33
GARNL3-214ENST00000478696 NREPQ16612 68 aa0.47□□□□□ -2.33
GARNL3-214ENST00000478696 HEPN1Q6WQI6 88 aa0.47□□□□□ -2.33
GARNL3-214ENST00000478696 APLNQ9ULZ1 77 aa0.47□□□□□ -2.33
GARNL3-214ENST00000478696 CMYA5Q8N3K9 4069 aa0.47□□□□□ -2.33
GARNL3-214ENST00000478696 MUC16Q8WXI7 14507 aa0.47□□□□□ -2.33
GARNL3-214ENST00000478696 ANKRD36A6QL64 1941 aa0.46□□□□□ -2.34
GARNL3-214ENST00000478696 HERC1Q15751 4861 aa0.46□□□□□ -2.34
GARNL3-214ENST00000478696 H3BVH4 76 aa0.46□□□□□ -2.34
GARNL3-214ENST00000478696 DEFB109BQ30KR1 87 aa0.46□□□□□ -2.34
GARNL3-214ENST00000478696 DEFB105AQ8NG35 78 aa0.46□□□□□ -2.34
GARNL3-214ENST00000478696 HERC2O95714 4834 aa0.45□□□□□ -2.34
GARNL3-214ENST00000478696 SMIM31A0A1B0GVY4 71 aa0.45□□□□□ -2.34
GARNL3-214ENST00000478696 COX6B2Q6YFQ2 88 aa0.45□□□□□ -2.34
GARNL3-214ENST00000478696 FXYD6Q9H0Q3 95 aa0.45□□□□□ -2.34
GARNL3-214ENST00000478696 LYSTQ99698 3801 aa0.45□□□□□ -2.34
GARNL3-214ENST00000478696 MUC2Q02817 5179 aa0.44□□□□□ -2.34
GARNL3-214ENST00000478696 CDKN2A-AS1Q9UH64 79 aa0.44□□□□□ -2.34
GARNL3-214ENST00000478696 DYNC2H1Q8NCM8 4307 aaKnown RBP0.44□□□□□ -2.34
GARNL3-214ENST00000478696 DNAH1Q9P2D7 4330 aa0.44□□□□□ -2.34
GARNL3-214ENST00000478696 PKHD1P08F94 4074 aa0.43□□□□□ -2.34
GARNL3-214ENST00000478696 NDUFA4O00483 81 aa0.43□□□□□ -2.34
GARNL3-214ENST00000478696 ATXN8Q156A1 80 aa0.43□□□□□ -2.34
GARNL3-214ENST00000478696 KLK9Q2XQG4 91 aa0.43□□□□□ -2.34
GARNL3-214ENST00000478696 H1FX-AS1Q4G0G2 97 aa0.43□□□□□ -2.34
GARNL3-214ENST00000478696 U3KQA8 63 aa0.43□□□□□ -2.34
GARNL3-214ENST00000478696 KRTAP20-1Q3LI63 56 aa0.42□□□□□ -2.34
GARNL3-214ENST00000478696 HILPDAQ9Y5L2 63 aa0.42□□□□□ -2.34
GARNL3-214ENST00000478696 ABCA13Q86UQ4 5058 aa0.42□□□□□ -2.34
GARNL3-214ENST00000478696 DNAH7Q8WXX0 4024 aa0.42□□□□□ -2.34
GARNL3-214ENST00000478696 HSPG2P98160 4391 aa0.42□□□□□ -2.34
GARNL3-214ENST00000478696 ANK3Q12955 4377 aaKnown RBP0.42□□□□□ -2.34
GARNL3-214ENST00000478696 NDUFA3O95167 84 aa0.41□□□□□ -2.34
GARNL3-214ENST00000478696 CD52P31358 61 aa0.41□□□□□ -2.34
GARNL3-214ENST00000478696 LELP1Q5T871 98 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms