RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 KRTAP10-6P60371 365 aaPredicted RBP9.7□□□□□ -0.86
SREBF1-212ENST00000478616 JMJD7-PLA2G4BH0Y9G9 81 aa9.69□□□□□ -0.86
SREBF1-212ENST00000478616 CCKP06307 115 aa9.69□□□□□ -0.86
SREBF1-212ENST00000478616 DEFB116Q30KQ4 102 aa9.69□□□□□ -0.86
SREBF1-212ENST00000478616 ATP11AUNQ6ZP68 121 aa9.69□□□□□ -0.86
SREBF1-212ENST00000478616 DSCR8Q96T75 97 aa9.69□□□□□ -0.86
SREBF1-212ENST00000478616 SIGMAR1Q99720 223 aa9.67□□□□□ -0.86
SREBF1-212ENST00000478616 IGKV4-1P06312 121 aa9.66□□□□□ -0.86
SREBF1-212ENST00000478616 SMCPP49901 116 aaPredicted RBP9.66□□□□□ -0.86
SREBF1-212ENST00000478616 PRO0461Q9UI25 63 aa9.66□□□□□ -0.86
SREBF1-212ENST00000478616 GTF2H5Q6ZYL4 71 aa9.65□□□□□ -0.86
SREBF1-212ENST00000478616 LOC110117498A0A087WWA1 95 aa9.64□□□□□ -0.87
SREBF1-212ENST00000478616 Q6ZQT0 140 aa9.64□□□□□ -0.87
SREBF1-212ENST00000478616 VPS25Q9BRG1 176 aa9.63□□□□□ -0.87
SREBF1-212ENST00000478616 C14orf132Q9NPU4 83 aa9.63□□□□□ -0.87
SREBF1-212ENST00000478616 PDE6GP18545 87 aa9.6□□□□□ -0.87
SREBF1-212ENST00000478616 LINC00313P59037 77 aa9.6□□□□□ -0.87
SREBF1-212ENST00000478616 COX6B2Q6YFQ2 88 aa9.6□□□□□ -0.87
SREBF1-212ENST00000478616 IGHV6-1A0A0B4J1U7 121 aa9.54□□□□□ -0.88
SREBF1-212ENST00000478616 F8W1H4 67 aa9.53□□□□□ -0.88
SREBF1-212ENST00000478616 A0A1B0GVX0 72 aa9.52□□□□□ -0.89
SREBF1-212ENST00000478616 C21orf62-AS1Q17RA5 79 aa9.52□□□□□ -0.89
SREBF1-212ENST00000478616 A0A1B0GV90 55 aa9.51□□□□□ -0.89
SREBF1-212ENST00000478616 A0A1B0GW54 56 aa9.51□□□□□ -0.89
SREBF1-212ENST00000478616 M0R2T5 61 aa9.51□□□□□ -0.89
SREBF1-212ENST00000478616 MPLKIPQ8TAP9 179 aa9.5□□□□□ -0.89
SREBF1-212ENST00000478616 HRES1P13985 223 aa9.49□□□□□ -0.89
SREBF1-212ENST00000478616 FSIP2Q5CZC0 6907 aa9.49□□□□□ -0.89
SREBF1-212ENST00000478616 ETDBQ3ZM63 59 aa9.46□□□□□ -0.9
SREBF1-212ENST00000478616 C8orf87E5RJ46 101 aa9.45□□□□□ -0.9
SREBF1-212ENST00000478616 CRCT1Q9UGL9 99 aa9.45□□□□□ -0.9
SREBF1-212ENST00000478616 KRTAP9-8Q9BYQ0 159 aa9.43□□□□□ -0.9
SREBF1-212ENST00000478616 J3KT08 172 aa9.41□□□□□ -0.9
SREBF1-212ENST00000478616 IGKV3D-7A0A0C4DH55 119 aa9.4□□□□□ -0.9
SREBF1-212ENST00000478616 NREPQ16612 68 aa9.39□□□□□ -0.91
SREBF1-212ENST00000478616 Q8N9P0 234 aaPredicted RBP9.39□□□□□ -0.91
SREBF1-212ENST00000478616 A8MWP4 228 aa9.37□□□□□ -0.91
SREBF1-212ENST00000478616 ZCCHC13Q8WW36 166 aaKnown RBP9.36□□□□□ -0.91
SREBF1-212ENST00000478616 C8orf17Q9NRJ1 99 aa9.36□□□□□ -0.91
SREBF1-212ENST00000478616 Q6ZVQ6 151 aa9.33□□□□□ -0.92
SREBF1-212ENST00000478616 LINC00846Q9NV44 126 aa9.33□□□□□ -0.92
SREBF1-212ENST00000478616 PRR15Q8IV56 129 aa9.3□□□□□ -0.92
SREBF1-212ENST00000478616 NDUFB1O75438 58 aa9.29□□□□□ -0.92
SREBF1-212ENST00000478616 MMP24-AS1A0A0U1RRL7 71 aa9.28□□□□□ -0.92
SREBF1-212ENST00000478616 MT2AP02795 61 aa9.27□□□□□ -0.93
SREBF1-212ENST00000478616 SPINK7P58062 85 aa9.27□□□□□ -0.93
SREBF1-212ENST00000478616 BPY2O14599 106 aa9.26□□□□□ -0.93
SREBF1-212ENST00000478616 UBL5Q9BZL1 73 aa9.26□□□□□ -0.93
SREBF1-212ENST00000478616 USH2AO75445 5202 aa9.25□□□□□ -0.93
SREBF1-212ENST00000478616 FAM236DA0A1B0GTK5 79 aa9.24□□□□□ -0.93
SREBF1-212ENST00000478616 FAM236CP0DP71 79 aa9.24□□□□□ -0.93
SREBF1-212ENST00000478616 K7EQZ3 153 aa9.23□□□□□ -0.93
SREBF1-212ENST00000478616 RBM12B-AS1Q9P1G2 102 aa9.23□□□□□ -0.93
SREBF1-212ENST00000478616 MT1FP04733 61 aa9.22□□□□□ -0.93
SREBF1-212ENST00000478616 FAM240AA0A1B0GVK7 77 aa9.19□□□□□ -0.94
SREBF1-212ENST00000478616 TMEM254Q8TBM7 123 aa9.19□□□□□ -0.94
SREBF1-212ENST00000478616 ACYP1P07311 99 aa9.18□□□□□ -0.94
SREBF1-212ENST00000478616 MRPL34Q9BQ48 92 aaKnown RBP9.18□□□□□ -0.94
SREBF1-212ENST00000478616 SSPOA2VEC9 5147 aa9.18□□□□□ -0.94
SREBF1-212ENST00000478616 Q8N9L7 120 aa9.17□□□□□ -0.94
SREBF1-212ENST00000478616 WFDC13Q8IUB5 93 aa9.13□□□□□ -0.95
SREBF1-212ENST00000478616 KRTAP9-3Q9BYQ3 159 aa9.13□□□□□ -0.95
SREBF1-212ENST00000478616 hDV103S1A0JD37 113 aa9.12□□□□□ -0.95
SREBF1-212ENST00000478616 Q5W150 140 aa9.12□□□□□ -0.95
SREBF1-212ENST00000478616 LCE2BO14633 110 aa9.11□□□□□ -0.95
SREBF1-212ENST00000478616 CXCL6P80162 114 aa9.11□□□□□ -0.95
SREBF1-212ENST00000478616 J3QR89 54 aa9.05□□□□□ -0.96
SREBF1-212ENST00000478616 ATP5EP2Q5VTU8 51 aa9.03□□□□□ -0.96
SREBF1-212ENST00000478616 CASC2Q6XLA1 102 aa9.03□□□□□ -0.96
SREBF1-212ENST00000478616 HCG22E2RYF7 251 aa9.02□□□□□ -0.97
SREBF1-212ENST00000478616 NDUFS5O43920 106 aa9.01□□□□□ -0.97
SREBF1-212ENST00000478616 KRTAP10-10P60014 251 aa9.01□□□□□ -0.97
SREBF1-212ENST00000478616 LINC00643Q86TS7 51 aa9.01□□□□□ -0.97
SREBF1-212ENST00000478616 IGKV2D-30A0A075B6S6 120 aa8.94□□□□□ -0.98
SREBF1-212ENST00000478616 IGKV2-30P06310 120 aa8.94□□□□□ -0.98
SREBF1-212ENST00000478616 HIST1H4AP62805 103 aaKnown RBP8.92□□□□□ -0.98
SREBF1-212ENST00000478616 H1FX-AS1Q4G0G2 97 aa8.92□□□□□ -0.98
SREBF1-212ENST00000478616 FCGBPQ9Y6R7 5405 aaPredicted RBP8.9□□□□□ -0.98
SREBF1-212ENST00000478616 K7ERU9 68 aa8.9□□□□□ -0.98
SREBF1-212ENST00000478616 C7orf65Q6ZTY9 151 aa8.9□□□□□ -0.98
SREBF1-212ENST00000478616 KRTAP19-1Q8IUB9 90 aa8.88□□□□□ -0.99
SREBF1-212ENST00000478616 A0A087WVE0 104 aa8.86□□□□□ -0.99
SREBF1-212ENST00000478616 KRTAP3-1Q9BYR8 98 aa8.85□□□□□ -0.99
SREBF1-212ENST00000478616 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.84□□□□□ -0.99
SREBF1-212ENST00000478616 C4orf26Q17RF5 130 aa8.84□□□□□ -0.99
SREBF1-212ENST00000478616 TP53AIP1Q9HCN2 124 aa8.8□□□□□ -1
SREBF1-212ENST00000478616 MT-ATP8P03928 68 aa8.76□□□□□ -1.01
SREBF1-212ENST00000478616 KRTAP9-7A8MTY7 169 aa8.74□□□□□ -1.01
SREBF1-212ENST00000478616 KRTAP19-6Q3LI70 58 aa8.72□□□□□ -1.01
SREBF1-212ENST00000478616 IMUPQ9GZP8 106 aa8.7□□□□□ -1.02
SREBF1-212ENST00000478616 UQCRQO14949 82 aa8.68□□□□□ -1.02
SREBF1-212ENST00000478616 TRAV22A0A0B4J277 110 aa8.67□□□□□ -1.02
SREBF1-212ENST00000478616 OCR1Q9BZK8 76 aa8.65□□□□□ -1.02
SREBF1-212ENST00000478616 C1orf64Q8NEQ6 169 aa8.64□□□□□ -1.03
SREBF1-212ENST00000478616 C5orf47Q569G3 176 aa8.62□□□□□ -1.03
SREBF1-212ENST00000478616 H0Y9P7 68 aa8.61□□□□□ -1.03
SREBF1-212ENST00000478616 LCA10Q71F78 164 aa8.61□□□□□ -1.03
SREBF1-212ENST00000478616 SCGB1A1P11684 91 aa8.6□□□□□ -1.03
SREBF1-212ENST00000478616 CYP4F30PQ9H0H9 118 aa8.6□□□□□ -1.03
SREBF1-212ENST00000478616 LOC101927531A0A1B0GV80 90 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms