RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 NREPQ16612 68 aa14.36□□□□□ -0.11
CCM2-211ENST00000478582 KRTAP4-1Q9BYQ7 146 aa14.36□□□□□ -0.11
CCM2-211ENST00000478582 DSCR10P59022 87 aa14.35□□□□□ -0.11
CCM2-211ENST00000478582 LINC00313P59037 77 aa14.35□□□□□ -0.11
CCM2-211ENST00000478582 PCOTHQ58A44 107 aa14.34□□□□□ -0.11
CCM2-211ENST00000478582 Q75L30 129 aa14.34□□□□□ -0.11
CCM2-211ENST00000478582 KRTAP9-2Q9BYQ4 174 aa14.33□□□□□ -0.12
CCM2-211ENST00000478582 A0A1B0GVX0 72 aa14.32□□□□□ -0.12
CCM2-211ENST00000478582 IGHV6-1A0A0B4J1U7 121 aa14.3□□□□□ -0.12
CCM2-211ENST00000478582 C20orf166-AS1Q96NR2 134 aa14.3□□□□□ -0.12
CCM2-211ENST00000478582 C8orf87E5RJ46 101 aa14.28□□□□□ -0.12
CCM2-211ENST00000478582 NOTCH2NLQ7Z3S9 236 aa14.28□□□□□ -0.12
CCM2-211ENST00000478582 A8MUU9 505 aa14.27□□□□□ -0.13
CCM2-211ENST00000478582 ETDBQ3ZM63 59 aa14.27□□□□□ -0.13
CCM2-211ENST00000478582 KRTAP16-1A8MUX0 517 aa14.26□□□□□ -0.13
CCM2-211ENST00000478582 A8MWP4 228 aa14.26□□□□□ -0.13
CCM2-211ENST00000478582 NDUFB1O75438 58 aa14.26□□□□□ -0.13
CCM2-211ENST00000478582 IGKV3D-7A0A0C4DH55 119 aa14.2□□□□□ -0.14
CCM2-211ENST00000478582 ATP11AUNQ6ZP68 121 aa14.2□□□□□ -0.14
CCM2-211ENST00000478582 Q6ZVQ6 151 aa14.19□□□□□ -0.14
CCM2-211ENST00000478582 A0A1B0GV90 55 aa14.17□□□□□ -0.14
CCM2-211ENST00000478582 PRR15Q8IV56 129 aa14.16□□□□□ -0.14
CCM2-211ENST00000478582 LINC00846Q9NV44 126 aa14.16□□□□□ -0.14
CCM2-211ENST00000478582 BPY2O14599 106 aa14.14□□□□□ -0.15
CCM2-211ENST00000478582 C8orf17Q9NRJ1 99 aa14.13□□□□□ -0.15
CCM2-211ENST00000478582 KRTAP9-6A0A140TA67 174 aa14.12□□□□□ -0.15
CCM2-211ENST00000478582 UBL5Q9BZL1 73 aa14.12□□□□□ -0.15
CCM2-211ENST00000478582 K7EQZ3 153 aa14.06□□□□□ -0.16
CCM2-211ENST00000478582 Q8N9P0 234 aaPredicted RBP14.03□□□□□ -0.16
CCM2-211ENST00000478582 MMP24-AS1A0A0U1RRL7 71 aa14.01□□□□□ -0.17
CCM2-211ENST00000478582 LCE2CQ5TA81 110 aa13.99□□□□□ -0.17
CCM2-211ENST00000478582 ACYP1P07311 99 aa13.97□□□□□ -0.17
CCM2-211ENST00000478582 KRTAP19-2Q3LHN2 52 aa13.97□□□□□ -0.17
CCM2-211ENST00000478582 TMEM254Q8TBM7 123 aa13.96□□□□□ -0.17
CCM2-211ENST00000478582 FAM240AA0A1B0GVK7 77 aa13.93□□□□□ -0.18
CCM2-211ENST00000478582 hDV103S1A0JD37 113 aa13.93□□□□□ -0.18
CCM2-211ENST00000478582 Q8N9L7 120 aa13.93□□□□□ -0.18
CCM2-211ENST00000478582 MRPL34Q9BQ48 92 aaKnown RBP13.92□□□□□ -0.18
CCM2-211ENST00000478582 ZCCHC13Q8WW36 166 aaKnown RBP13.89□□□□□ -0.19
CCM2-211ENST00000478582 CXCL6P80162 114 aa13.88□□□□□ -0.19
CCM2-211ENST00000478582 CASC2Q6XLA1 102 aa13.82□□□□□ -0.2
CCM2-211ENST00000478582 MT1HP80294 61 aa13.8□□□□□ -0.2
CCM2-211ENST00000478582 WFDC13Q8IUB5 93 aa13.8□□□□□ -0.2
CCM2-211ENST00000478582 HCG22E2RYF7 251 aa13.76□□□□□ -0.21
CCM2-211ENST00000478582 NDUFS5O43920 106 aa13.74□□□□□ -0.21
CCM2-211ENST00000478582 ATP5EP2Q5VTU8 51 aa13.71□□□□□ -0.21
CCM2-211ENST00000478582 COX6B2Q6YFQ2 88 aa13.7□□□□□ -0.22
CCM2-211ENST00000478582 J3QR89 54 aa13.66□□□□□ -0.22
CCM2-211ENST00000478582 SPINK7P58062 85 aa13.66□□□□□ -0.22
CCM2-211ENST00000478582 HRES1P13985 223 aa13.65□□□□□ -0.22
CCM2-211ENST00000478582 LINC00643Q86TS7 51 aa13.64□□□□□ -0.23
CCM2-211ENST00000478582 LCE2DQ5TA82 110 aaPredicted RBP13.62□□□□□ -0.23
CCM2-211ENST00000478582 MPLKIPQ8TAP9 179 aa13.62□□□□□ -0.23
CCM2-211ENST00000478582 Q5W150 140 aa13.59□□□□□ -0.23
CCM2-211ENST00000478582 M0R2T5 61 aa13.55□□□□□ -0.24
CCM2-211ENST00000478582 RBM12B-AS1Q9P1G2 102 aa13.54□□□□□ -0.24
CCM2-211ENST00000478582 LORP23490 312 aaPredicted RBP13.53□□□□□ -0.24
CCM2-211ENST00000478582 KRTAP10-6P60371 365 aaPredicted RBP13.53□□□□□ -0.24
CCM2-211ENST00000478582 HIST1H4AP62805 103 aaKnown RBP13.51□□□□□ -0.25
CCM2-211ENST00000478582 TP53AIP1Q9HCN2 124 aa13.51□□□□□ -0.25
CCM2-211ENST00000478582 FLGP20930 4061 aaPredicted RBP13.49□□□□□ -0.25
CCM2-211ENST00000478582 FAM236DA0A1B0GTK5 79 aa13.44□□□□□ -0.26
CCM2-211ENST00000478582 FAM236CP0DP71 79 aa13.44□□□□□ -0.26
CCM2-211ENST00000478582 C7orf65Q6ZTY9 151 aa13.42□□□□□ -0.26
CCM2-211ENST00000478582 IGKV2D-30A0A075B6S6 120 aa13.41□□□□□ -0.26
CCM2-211ENST00000478582 IGKV2-30P06310 120 aa13.41□□□□□ -0.26
CCM2-211ENST00000478582 CRCT1Q9UGL9 99 aa13.41□□□□□ -0.26
CCM2-211ENST00000478582 FSIP2Q5CZC0 6907 aa13.41□□□□□ -0.26
CCM2-211ENST00000478582 A0A087WVE0 104 aa13.38□□□□□ -0.27
CCM2-211ENST00000478582 K7ERU9 68 aa13.37□□□□□ -0.27
CCM2-211ENST00000478582 UQCRQO14949 82 aa13.25□□□□□ -0.29
CCM2-211ENST00000478582 TRAV22A0A0B4J277 110 aa13.24□□□□□ -0.29
CCM2-211ENST00000478582 IMUPQ9GZP8 106 aa13.18□□□□□ -0.3
CCM2-211ENST00000478582 C4orf26Q17RF5 130 aa13.14□□□□□ -0.31
CCM2-211ENST00000478582 LOC101927531A0A1B0GV80 90 aa13.13□□□□□ -0.31
CCM2-211ENST00000478582 H1FX-AS1Q4G0G2 97 aa13.13□□□□□ -0.31
CCM2-211ENST00000478582 OCR1Q9BZK8 76 aa13.13□□□□□ -0.31
CCM2-211ENST00000478582 CYP4F30PQ9H0H9 118 aa13.13□□□□□ -0.31
CCM2-211ENST00000478582 ATOX1O00244 68 aa13.12□□□□□ -0.31
CCM2-211ENST00000478582 MT-ATP8P03928 68 aa13.12□□□□□ -0.31
CCM2-211ENST00000478582 H0Y9P7 68 aa13.1□□□□□ -0.31
CCM2-211ENST00000478582 KRTAP9-8Q9BYQ0 159 aa13.08□□□□□ -0.32
CCM2-211ENST00000478582 SCGB1A1P11684 91 aa13.01□□□□□ -0.33
CCM2-211ENST00000478582 KRTAP3-1Q9BYR8 98 aa13□□□□□ -0.33
CCM2-211ENST00000478582 C5orf47Q569G3 176 aa12.99□□□□□ -0.33
CCM2-211ENST00000478582 C1orf64Q8NEQ6 169 aa12.99□□□□□ -0.33
CCM2-211ENST00000478582 MP68P56378 58 aa12.96□□□□□ -0.33
CCM2-211ENST00000478582 LINC00208Q96KT6 92 aa12.94□□□□□ -0.34
CCM2-211ENST00000478582 H3BPC8 53 aa12.89□□□□□ -0.35
CCM2-211ENST00000478582 MT2AP02795 61 aa12.88□□□□□ -0.35
CCM2-211ENST00000478582 FAM236AA0A1B0GUQ0 79 aa12.87□□□□□ -0.35
CCM2-211ENST00000478582 FAM236BA0A1B0GV22 79 aa12.87□□□□□ -0.35
CCM2-211ENST00000478582 SMIM20Q8N5G0 67 aa12.84□□□□□ -0.35
CCM2-211ENST00000478582 KLKP1Q107X0 134 aa12.8□□□□□ -0.36
CCM2-211ENST00000478582 TRAV7A0A075B6U4 112 aa12.78□□□□□ -0.36
CCM2-211ENST00000478582 MT1FP04733 61 aa12.78□□□□□ -0.36
CCM2-211ENST00000478582 S4R3F8 94 aa12.77□□□□□ -0.37
CCM2-211ENST00000478582 KRTAP10-10P60014 251 aa12.74□□□□□ -0.37
CCM2-211ENST00000478582 LCA10Q71F78 164 aa12.7□□□□□ -0.38
CCM2-211ENST00000478582 A8MUN3 132 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms