RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 Q6Q795 121 aa3.83□□□□□ -1.8
BRCA1-215ENST00000478531 BAALC-AS2P0C853 105 aa3.82□□□□□ -1.8
BRCA1-215ENST00000478531 TEN1Q86WV5 123 aa3.82□□□□□ -1.8
BRCA1-215ENST00000478531 A0A087WSZ3 146 aa3.81□□□□□ -1.8
BRCA1-215ENST00000478531 FAM236AA0A1B0GUQ0 79 aa3.81□□□□□ -1.8
BRCA1-215ENST00000478531 FAM236BA0A1B0GV22 79 aa3.81□□□□□ -1.8
BRCA1-215ENST00000478531 TAX1BP3O14907 124 aa3.81□□□□□ -1.8
BRCA1-215ENST00000478531 SEC61BP60468 96 aaKnown RBP3.81□□□□□ -1.8
BRCA1-215ENST00000478531 A0A1W2PNM2 257 aa3.8□□□□□ -1.8
BRCA1-215ENST00000478531 C9orf118A6NHY6 69 aa3.8□□□□□ -1.8
BRCA1-215ENST00000478531 CCKP06307 115 aa3.8□□□□□ -1.8
BRCA1-215ENST00000478531 ASB16-AS1Q495Z4 193 aa3.8□□□□□ -1.8
BRCA1-215ENST00000478531 TRBV20-1A0A075B6N2 111 aa3.79□□□□□ -1.8
BRCA1-215ENST00000478531 A0A1W2PPM0 123 aa3.79□□□□□ -1.8
BRCA1-215ENST00000478531 RBM3P98179 157 aaKnown RBP3.79□□□□□ -1.8
BRCA1-215ENST00000478531 PRR15Q8IV56 129 aa3.79□□□□□ -1.8
BRCA1-215ENST00000478531 DSCR8Q96T75 97 aa3.79□□□□□ -1.8
BRCA1-215ENST00000478531 K7EP34 96 aa3.78□□□□□ -1.8
BRCA1-215ENST00000478531 TRBV7-4A0A0J9YYF1 115 aa3.78□□□□□ -1.8
BRCA1-215ENST00000478531 MT-ATP8P03928 68 aa3.78□□□□□ -1.8
BRCA1-215ENST00000478531 TMEM258P61165 79 aa3.77□□□□□ -1.81
BRCA1-215ENST00000478531 NDUFS5O43920 106 aa3.76□□□□□ -1.81
BRCA1-215ENST00000478531 Q96NJ1 140 aa3.76□□□□□ -1.81
BRCA1-215ENST00000478531 JMJD7-PLA2G4BH0Y9G9 81 aa3.75□□□□□ -1.81
BRCA1-215ENST00000478531 OBSCN-AS1Q96MR7 158 aa3.75□□□□□ -1.81
BRCA1-215ENST00000478531 C14orf132Q9NPU4 83 aa3.75□□□□□ -1.81
BRCA1-215ENST00000478531 SPCS1Q9Y6A9 102 aa3.75□□□□□ -1.81
BRCA1-215ENST00000478531 DEFB116Q30KQ4 102 aa3.74□□□□□ -1.81
BRCA1-215ENST00000478531 BRK1Q8WUW1 75 aa3.74□□□□□ -1.81
BRCA1-215ENST00000478531 Q6ZQT0 140 aa3.74□□□□□ -1.81
BRCA1-215ENST00000478531 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
BRCA1-215ENST00000478531 H3BT86 120 aa3.73□□□□□ -1.81
BRCA1-215ENST00000478531 UQCRQO14949 82 aa3.73□□□□□ -1.81
BRCA1-215ENST00000478531 IGKV4-1P06312 121 aa3.73□□□□□ -1.81
BRCA1-215ENST00000478531 KRTAP4-8Q9BYQ9 185 aa3.73□□□□□ -1.81
BRCA1-215ENST00000478531 LOC110117498A0A087WWA1 95 aa3.72□□□□□ -1.81
BRCA1-215ENST00000478531 PCOTHQ58A44 107 aa3.72□□□□□ -1.81
BRCA1-215ENST00000478531 FAT4Q6V0I7 4981 aa3.72□□□□□ -1.81
BRCA1-215ENST00000478531 IMUPQ9GZP8 106 aa3.72□□□□□ -1.81
BRCA1-215ENST00000478531 DSCR10P59022 87 aa3.71□□□□□ -1.82
BRCA1-215ENST00000478531 RPL37P61927 97 aaKnown RBP3.71□□□□□ -1.82
BRCA1-215ENST00000478531 LINC00472Q9H8W2 130 aa3.71□□□□□ -1.82
BRCA1-215ENST00000478531 F8W1H4 67 aa3.71□□□□□ -1.82
BRCA1-215ENST00000478531 PDE6GP18545 87 aa3.71□□□□□ -1.82
BRCA1-215ENST00000478531 KRTAP4-1Q9BYQ7 146 aa3.71□□□□□ -1.82
BRCA1-215ENST00000478531 IGHV6-1A0A0B4J1U7 121 aa3.7□□□□□ -1.82
BRCA1-215ENST00000478531 A8MUN3 132 aa3.69□□□□□ -1.82
BRCA1-215ENST00000478531 MP68P56378 58 aa3.68□□□□□ -1.82
BRCA1-215ENST00000478531 LINC00313P59037 77 aa3.68□□□□□ -1.82
BRCA1-215ENST00000478531 NOTCH2NLQ7Z3S9 236 aa3.68□□□□□ -1.82
BRCA1-215ENST00000478531 SMIM26A0A096LP01 95 aa3.67□□□□□ -1.82
BRCA1-215ENST00000478531 PSPHP1O15172 72 aa3.67□□□□□ -1.82
BRCA1-215ENST00000478531 KRTAP19-1Q8IUB9 90 aa3.67□□□□□ -1.82
BRCA1-215ENST00000478531 PRO0461Q9UI25 63 aa3.67□□□□□ -1.82
BRCA1-215ENST00000478531 A0A1B0GVX0 72 aa3.67□□□□□ -1.82
BRCA1-215ENST00000478531 A0A1B0GW54 56 aa3.67□□□□□ -1.82
BRCA1-215ENST00000478531 ATP11AUNQ6ZP68 121 aa3.67□□□□□ -1.82
BRCA1-215ENST00000478531 KRTAP9-2Q9BYQ4 174 aa3.67□□□□□ -1.82
BRCA1-215ENST00000478531 NREPQ16612 68 aa3.66□□□□□ -1.82
BRCA1-215ENST00000478531 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
BRCA1-215ENST00000478531 C20orf166-AS1Q96NR2 134 aa3.65□□□□□ -1.82
BRCA1-215ENST00000478531 A8MUU9 505 aa3.65□□□□□ -1.83
BRCA1-215ENST00000478531 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.65□□□□□ -1.83
BRCA1-215ENST00000478531 NDUFB1O75438 58 aa3.65□□□□□ -1.83
BRCA1-215ENST00000478531 LCA10Q71F78 164 aa3.65□□□□□ -1.83
BRCA1-215ENST00000478531 SERP1Q9Y6X1 66 aa3.65□□□□□ -1.83
BRCA1-215ENST00000478531 KRTAP9-6A0A140TA67 174 aa3.64□□□□□ -1.83
BRCA1-215ENST00000478531 KRTAP16-1A8MUX0 517 aa3.64□□□□□ -1.83
BRCA1-215ENST00000478531 A8MWP4 228 aa3.63□□□□□ -1.83
BRCA1-215ENST00000478531 IGKV3D-7A0A0C4DH55 119 aa3.63□□□□□ -1.83
BRCA1-215ENST00000478531 COX7CP15954 63 aa3.63□□□□□ -1.83
BRCA1-215ENST00000478531 ETDBQ3ZM63 59 aa3.62□□□□□ -1.83
BRCA1-215ENST00000478531 BPY2O14599 106 aa3.61□□□□□ -1.83
BRCA1-215ENST00000478531 C8orf17Q9NRJ1 99 aa3.61□□□□□ -1.83
BRCA1-215ENST00000478531 K7EQZ3 153 aa3.6□□□□□ -1.83
BRCA1-215ENST00000478531 KRTAP9-8Q9BYQ0 159 aa3.6□□□□□ -1.83
BRCA1-215ENST00000478531 FLGP20930 4061 aaPredicted RBP3.6□□□□□ -1.83
BRCA1-215ENST00000478531 LINC00846Q9NV44 126 aa3.6□□□□□ -1.83
BRCA1-215ENST00000478531 KRTAP19-4Q3LI73 84 aa3.59□□□□□ -1.83
BRCA1-215ENST00000478531 COX6B2Q6YFQ2 88 aa3.59□□□□□ -1.83
BRCA1-215ENST00000478531 Q8N9L7 120 aa3.59□□□□□ -1.83
BRCA1-215ENST00000478531 UBL5Q9BZL1 73 aa3.59□□□□□ -1.83
BRCA1-215ENST00000478531 MMP24-AS1A0A0U1RRL7 71 aa3.58□□□□□ -1.84
BRCA1-215ENST00000478531 KRTAP19-2Q3LHN2 52 aa3.58□□□□□ -1.84
BRCA1-215ENST00000478531 hDV103S1A0JD37 113 aa3.56□□□□□ -1.84
BRCA1-215ENST00000478531 Q8N9P0 234 aaPredicted RBP3.56□□□□□ -1.84
BRCA1-215ENST00000478531 ZCCHC13Q8WW36 166 aaKnown RBP3.56□□□□□ -1.84
BRCA1-215ENST00000478531 LCE3BQ5TA77 95 aa3.56□□□□□ -1.84
BRCA1-215ENST00000478531 WFDC13Q8IUB5 93 aa3.56□□□□□ -1.84
BRCA1-215ENST00000478531 TMEM254Q8TBM7 123 aa3.56□□□□□ -1.84
BRCA1-215ENST00000478531 LINC01554Q52M75 96 aa3.55□□□□□ -1.84
BRCA1-215ENST00000478531 MRPL34Q9BQ48 92 aaKnown RBP3.55□□□□□ -1.84
BRCA1-215ENST00000478531 C7orf65Q6ZTY9 151 aa3.54□□□□□ -1.84
BRCA1-215ENST00000478531 MT1HP80294 61 aa3.54□□□□□ -1.84
BRCA1-215ENST00000478531 CASC2Q6XLA1 102 aa3.53□□□□□ -1.84
BRCA1-215ENST00000478531 ATOX1O00244 68 aa3.52□□□□□ -1.85
BRCA1-215ENST00000478531 M0R2T5 61 aa3.52□□□□□ -1.85
BRCA1-215ENST00000478531 CXCL6P80162 114 aa3.52□□□□□ -1.85
BRCA1-215ENST00000478531 HCG22E2RYF7 251 aa3.51□□□□□ -1.85
BRCA1-215ENST00000478531 HRES1P13985 223 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms