RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 TENM1Q9UKZ4 2725 aa1.9□□□□□ -2.11
FNDC3B-209ENST00000478016 CADP27708 2225 aa1.9□□□□□ -2.11
FNDC3B-209ENST00000478016 RTTNQ86VV8 2226 aa1.9□□□□□ -2.11
FNDC3B-209ENST00000478016 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.89□□□□□ -2.114e-16■■■■□ 24.9
FNDC3B-209ENST00000478016 LYNX1G3V0Z9 82 aa1.89□□□□□ -2.11
FNDC3B-209ENST00000478016 LY6G6CO95867 125 aa1.89□□□□□ -2.11
FNDC3B-209ENST00000478016 LYNX1P0DP58 116 aa1.89□□□□□ -2.11
FNDC3B-209ENST00000478016 CRIP1P50238 77 aa1.89□□□□□ -2.11
FNDC3B-209ENST00000478016 RYR3Q15413 4870 aa1.89□□□□□ -2.11
FNDC3B-209ENST00000478016 FXYD4P59646 89 aa1.88□□□□□ -2.11
FNDC3B-209ENST00000478016 TRRAPQ9Y4A5 3859 aa1.88□□□□□ -2.11
FNDC3B-209ENST00000478016 MGAM2Q2M2H8 2515 aa1.87□□□□□ -2.11
FNDC3B-209ENST00000478016 RPS27P42677 84 aaKnown RBP1.87□□□□□ -2.11
FNDC3B-209ENST00000478016 LINC00158P58513 81 aa1.87□□□□□ -2.11
FNDC3B-209ENST00000478016 ALPK2Q86TB3 2170 aa1.87□□□□□ -2.11
FNDC3B-209ENST00000478016 SMIM11BQ8TCY0 68 aa1.87□□□□□ -2.11
FNDC3B-209ENST00000478016 KMT2CQ8NEZ4 4911 aaKnown RBP1.87□□□□□ -2.11
FNDC3B-209ENST00000478016 ACYP2P14621 99 aa1.86□□□□□ -2.11
FNDC3B-209ENST00000478016 Q8IZM0 81 aa1.86□□□□□ -2.11
FNDC3B-209ENST00000478016 TTTY10Q9BZA0 68 aa1.86□□□□□ -2.11
FNDC3B-209ENST00000478016 RYR2Q92736 4967 aa1.86□□□□□ -2.11
FNDC3B-209ENST00000478016 IGKV2D-24A0A075B6R9 120 aa1.85□□□□□ -2.11
FNDC3B-209ENST00000478016 G3V318 75 aa1.85□□□□□ -2.11
FNDC3B-209ENST00000478016 H3BRN7 92 aa1.85□□□□□ -2.11
FNDC3B-209ENST00000478016 POLR2KP53803 58 aaKnown RBP1.85□□□□□ -2.11
FNDC3B-209ENST00000478016 Q6ZQY7 126 aa1.85□□□□□ -2.11
FNDC3B-209ENST00000478016 Q8N9L7 120 aa1.85□□□□□ -2.11
FNDC3B-209ENST00000478016 KAAG1Q9UBP8 84 aa1.85□□□□□ -2.11
FNDC3B-209ENST00000478016 PKD1L1Q8TDX9 2849 aa1.85□□□□□ -2.11
FNDC3B-209ENST00000478016 ALMS1Q8TCU4 4167 aa1.84□□□□□ -2.11
FNDC3B-209ENST00000478016 IGKV2-28A0A075B6P5 120 aa1.84□□□□□ -2.11
FNDC3B-209ENST00000478016 IGKV2D-28P01615 120 aa1.84□□□□□ -2.11
FNDC3B-209ENST00000478016 ANGP03950 147 aaKnown RBP1.84□□□□□ -2.11
FNDC3B-209ENST00000478016 C10orf99Q6UWK7 81 aa1.84□□□□□ -2.11
FNDC3B-209ENST00000478016 BRD3OSQ6XYD6 125 aa1.84□□□□□ -2.11
FNDC3B-209ENST00000478016 DEFB108BQ8NET1 73 aa1.84□□□□□ -2.11
FNDC3B-209ENST00000478016 TGP01266 2768 aa1.84□□□□□ -2.12
FNDC3B-209ENST00000478016 EPPK1P58107 5090 aaKnown RBP1.84□□□□□ -2.12
FNDC3B-209ENST00000478016 DNAH3Q8TD57 4116 aa1.84□□□□□ -2.12
FNDC3B-209ENST00000478016 DNAH9Q9NYC9 4486 aa1.83□□□□□ -2.12
FNDC3B-209ENST00000478016 NOTCH1P46531 2555 aa1.83□□□□□ -2.12
FNDC3B-209ENST00000478016 PRB3Q04118 309 aaPredicted RBP1.83□□□□□ -2.12
FNDC3B-209ENST00000478016 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.83□□□□□ -2.12
FNDC3B-209ENST00000478016 CDKN2A-AS1Q9UH64 79 aa1.83□□□□□ -2.12
FNDC3B-209ENST00000478016 VWFP04275 2813 aa1.83□□□□□ -2.12
FNDC3B-209ENST00000478016 DYNC2H1Q8NCM8 4307 aaKnown RBP1.82□□□□□ -2.12
FNDC3B-209ENST00000478016 H3BSH0 61 aa1.82□□□□□ -2.12
FNDC3B-209ENST00000478016 KRTAP10-8P60410 259 aa1.82□□□□□ -2.12
FNDC3B-209ENST00000478016 KRTAP13-3Q3SY46 172 aa1.82□□□□□ -2.12
FNDC3B-209ENST00000478016 PLAC4Q8WY50 150 aa1.82□□□□□ -2.12
FNDC3B-209ENST00000478016 SACSQ9NZJ4 4579 aa1.82□□□□□ -2.12
FNDC3B-209ENST00000478016 WNK2Q9Y3S1 2297 aa1.81□□□□□ -2.12
FNDC3B-209ENST00000478016 GVQW2A0A096LPI5 108 aaPredicted RBP1.81□□□□□ -2.12
FNDC3B-209ENST00000478016 PRB2P02812 416 aaPredicted RBP1.81□□□□□ -2.12
FNDC3B-209ENST00000478016 PIGYQ3MUY2 71 aa1.81□□□□□ -2.12
FNDC3B-209ENST00000478016 MINOS1Q5TGZ0 78 aa1.81□□□□□ -2.12
FNDC3B-209ENST00000478016 LINC00575Q6W349 94 aa1.81□□□□□ -2.12
FNDC3B-209ENST00000478016 Q6ZRX8 168 aa1.81□□□□□ -2.12
FNDC3B-209ENST00000478016 BIRC6Q9NR09 4857 aa1.81□□□□□ -2.12
FNDC3B-209ENST00000478016 HYDINQ4G0P3 5121 aa1.81□□□□□ -2.12
FNDC3B-209ENST00000478016 HUWE1Q7Z6Z7 4374 aaKnown RBP1.8□□□□□ -2.12
FNDC3B-209ENST00000478016 Q6ZRN7 208 aaPredicted RBP1.8□□□□□ -2.12
FNDC3B-209ENST00000478016 WNK1Q9H4A3 2382 aa1.79□□□□□ -2.12
FNDC3B-209ENST00000478016 NBEAL2Q6ZNJ1 2754 aa1.79□□□□□ -2.12
FNDC3B-209ENST00000478016 H3BUX3 64 aa1.79□□□□□ -2.12
FNDC3B-209ENST00000478016 SSBP3-AS1Q7Z2R9 100 aa1.79□□□□□ -2.12
FNDC3B-209ENST00000478016 PCLOQ9Y6V0 5065 aa1.78□□□□□ -2.12
FNDC3B-209ENST00000478016 DNAH1Q9P2D7 4330 aa1.78□□□□□ -2.12
FNDC3B-209ENST00000478016 STARD9Q9P2P6 4700 aa1.78□□□□□ -2.13
FNDC3B-209ENST00000478016 DNAH7Q8WXX0 4024 aa1.77□□□□□ -2.13
FNDC3B-209ENST00000478016 LCE3AQ5TA76 89 aa1.77□□□□□ -2.13
FNDC3B-209ENST00000478016 COX6B2Q6YFQ2 88 aa1.77□□□□□ -2.13
FNDC3B-209ENST00000478016 TMEM167AQ8TBQ9 72 aa1.77□□□□□ -2.13
FNDC3B-209ENST00000478016 TP53AIP1Q9HCN2 124 aa1.77□□□□□ -2.13
FNDC3B-209ENST00000478016 IGLV5-48A0A075B6I7 105 aa1.76□□□□□ -2.13
FNDC3B-209ENST00000478016 H3BUA1 57 aa1.76□□□□□ -2.13
FNDC3B-209ENST00000478016 I3L2K1 104 aa1.76□□□□□ -2.13
FNDC3B-209ENST00000478016 PRCDQ00LT1 54 aa1.76□□□□□ -2.13
FNDC3B-209ENST00000478016 RPL39P5Q59GN2 51 aa1.76□□□□□ -2.13
FNDC3B-209ENST00000478016 COL7A1Q02388 2944 aa1.76□□□□□ -2.13
FNDC3B-209ENST00000478016 PLECQ15149 4684 aaKnown RBP1.75□□□□□ -2.13
FNDC3B-209ENST00000478016 K7EIL1 84 aa1.75□□□□□ -2.13
FNDC3B-209ENST00000478016 K7EQZ3 153 aa1.75□□□□□ -2.13
FNDC3B-209ENST00000478016 RPL39P62891 51 aaKnown RBP1.75□□□□□ -2.13
FNDC3B-209ENST00000478016 KLK9Q2XQG4 91 aa1.75□□□□□ -2.13
FNDC3B-209ENST00000478016 KRTAP13-2Q52LG2 175 aa1.75□□□□□ -2.13
FNDC3B-209ENST00000478016 USMG5Q96IX5 58 aa1.75□□□□□ -2.13
FNDC3B-209ENST00000478016 TENM3Q9P273 2699 aa1.74□□□□□ -2.13
FNDC3B-209ENST00000478016 STAB2Q8WWQ8 2551 aa1.74□□□□□ -2.13
FNDC3B-209ENST00000478016 DEFB136Q30KP8 78 aa1.74□□□□□ -2.13
FNDC3B-209ENST00000478016 LEAP2Q969E1 77 aa1.74□□□□□ -2.13
FNDC3B-209ENST00000478016 RPL39LQ96EH5 51 aaKnown RBP1.74□□□□□ -2.13
FNDC3B-209ENST00000478016 HERC2O95714 4834 aa1.73□□□□□ -2.13
FNDC3B-209ENST00000478016 IGKV2-24A0A0C4DH68 120 aa1.73□□□□□ -2.13
FNDC3B-209ENST00000478016 IGFL1Q6UW32 110 aa1.73□□□□□ -2.13
FNDC3B-209ENST00000478016 LYSTQ99698 3801 aa1.73□□□□□ -2.13
FNDC3B-209ENST00000478016 ABCA13Q86UQ4 5058 aa1.72□□□□□ -2.13
FNDC3B-209ENST00000478016 H0YAA0 97 aa1.72□□□□□ -2.13
FNDC3B-209ENST00000478016 WT1-ASQ06250 92 aa1.72□□□□□ -2.13
FNDC3B-209ENST00000478016 PP632Q6XCG6 107 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms