RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 DEFB119Q8N690 84 aa3.04□□□□□ -1.92
SPTLC3-205ENST00000476791 DMXL2Q8TDJ6 3036 aa3.04□□□□□ -1.92
SPTLC3-205ENST00000476791 KALRNO60229 2985 aa3.04□□□□□ -1.92
SPTLC3-205ENST00000476791 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
SPTLC3-205ENST00000476791 TENM2Q9NT68 2774 aa3.02□□□□□ -1.93
SPTLC3-205ENST00000476791 KRTAP13-3Q3SY46 172 aa3.02□□□□□ -1.93
SPTLC3-205ENST00000476791 H1FX-AS1Q4G0G2 97 aa3.02□□□□□ -1.93
SPTLC3-205ENST00000476791 DEFB109BQ30KR1 87 aa3.02□□□□□ -1.93
SPTLC3-205ENST00000476791 CELSR1Q9NYQ6 3014 aa3.02□□□□□ -1.93
SPTLC3-205ENST00000476791 HIVEP3Q5T1R4 2406 aa3.02□□□□□ -1.93
SPTLC3-205ENST00000476791 CSMD1Q96PZ7 3565 aa3.01□□□□□ -1.93
SPTLC3-205ENST00000476791 TLN1Q9Y490 2541 aaKnown RBP3.01□□□□□ -1.93
SPTLC3-205ENST00000476791 LYNX1P0DP58 116 aa3.01□□□□□ -1.93
SPTLC3-205ENST00000476791 HTN1P15515 57 aa3□□□□□ -1.93
SPTLC3-205ENST00000476791 SPINK13Q1W4C9 94 aa3□□□□□ -1.93
SPTLC3-205ENST00000476791 MTORP42345 2549 aa3□□□□□ -1.93
SPTLC3-205ENST00000476791 SPG11Q96JI7 2443 aa3□□□□□ -1.93
SPTLC3-205ENST00000476791 DEFB108BQ8NET1 73 aa3□□□□□ -1.93
SPTLC3-205ENST00000476791 DNHD1Q96M86 4753 aa2.99□□□□□ -1.93
SPTLC3-205ENST00000476791 ROS1P08922 2347 aa2.99□□□□□ -1.93
SPTLC3-205ENST00000476791 ITPR2Q14571 2701 aa2.99□□□□□ -1.93
SPTLC3-205ENST00000476791 AKAP6Q13023 2319 aa2.99□□□□□ -1.93
SPTLC3-205ENST00000476791 NBASA2RRP1 2371 aa2.99□□□□□ -1.93
SPTLC3-205ENST00000476791 MT3P25713 68 aa2.99□□□□□ -1.93
SPTLC3-205ENST00000476791 VWFP04275 2813 aa2.99□□□□□ -1.93
SPTLC3-205ENST00000476791 HIVEP1P15822 2718 aa2.98□□□□□ -1.93
SPTLC3-205ENST00000476791 NF1P21359 2839 aa2.98□□□□□ -1.93
SPTLC3-205ENST00000476791 PDZD2O15018 2839 aa2.98□□□□□ -1.93
SPTLC3-205ENST00000476791 ITPR3Q14573 2671 aa2.98□□□□□ -1.93
SPTLC3-205ENST00000476791 FLNCQ14315 2725 aa2.97□□□□□ -1.93
SPTLC3-205ENST00000476791 POLQO75417 2590 aa2.97□□□□□ -1.93
SPTLC3-205ENST00000476791 SMG1Q96Q15 3661 aaKnown RBP2.97□□□□□ -1.93
SPTLC3-205ENST00000476791 ANKHD1Q8IWZ3 2542 aaKnown RBP2.97□□□□□ -1.93
SPTLC3-205ENST00000476791 UBE2DNLQ8IWF7 75 aa2.97□□□□□ -1.93
SPTLC3-205ENST00000476791 PRLHP81277 87 aa2.96□□□□□ -1.94
SPTLC3-205ENST00000476791 DCHS2Q6V1P9 2916 aa2.96□□□□□ -1.94
SPTLC3-205ENST00000476791 RPL37P61927 97 aaKnown RBP2.96□□□□□ -1.94
SPTLC3-205ENST00000476791 DEFB133Q30KQ1 61 aa2.96□□□□□ -1.94
SPTLC3-205ENST00000476791 PRRC2CQ9Y520 2896 aaKnown RBP2.95□□□□□ -1.94
SPTLC3-205ENST00000476791 SPINK1P00995 79 aa2.95□□□□□ -1.94
SPTLC3-205ENST00000476791 SETD2Q9BYW2 2564 aaPredicted RBP2.94□□□□□ -1.94
SPTLC3-205ENST00000476791 DEFB131AP59861 70 aa2.94□□□□□ -1.94
SPTLC3-205ENST00000476791 KRTAP12-2P59991 146 aa2.94□□□□□ -1.94
SPTLC3-205ENST00000476791 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
SPTLC3-205ENST00000476791 APCP25054 2843 aa2.93□□□□□ -1.94
SPTLC3-205ENST00000476791 HIVEP2P31629 2446 aa2.93□□□□□ -1.94
SPTLC3-205ENST00000476791 NBPF19A0A087WUL8 3843 aa2.93□□□□□ -1.94
SPTLC3-205ENST00000476791 KLK9Q2XQG4 91 aa2.91□□□□□ -1.94
SPTLC3-205ENST00000476791 LRBAP50851 2863 aa2.91□□□□□ -1.94
SPTLC3-205ENST00000476791 APLNQ9ULZ1 77 aa2.91□□□□□ -1.94
SPTLC3-205ENST00000476791 COX6B2Q6YFQ2 88 aa2.9□□□□□ -1.95
SPTLC3-205ENST00000476791 RHPN1-AS1Q9BWJ2 59 aa2.9□□□□□ -1.95
SPTLC3-205ENST00000476791 CSMD3Q7Z407 3707 aa2.9□□□□□ -1.95
SPTLC3-205ENST00000476791 AKAP9Q99996 3911 aa2.89□□□□□ -1.95
SPTLC3-205ENST00000476791 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
SPTLC3-205ENST00000476791 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
SPTLC3-205ENST00000476791 NSD1Q96L73 2696 aaPredicted RBP2.87□□□□□ -1.95
SPTLC3-205ENST00000476791 C10orf99Q6UWK7 81 aa2.87□□□□□ -1.95
SPTLC3-205ENST00000476791 DMBT1Q9UGM3 2413 aaPredicted RBP2.87□□□□□ -1.95
SPTLC3-205ENST00000476791 MAPK1IP1LQ8NDC0 245 aa2.86□□□□□ -1.95
SPTLC3-205ENST00000476791 DEFB136Q30KP8 78 aa2.86□□□□□ -1.95
SPTLC3-205ENST00000476791 ANK2Q01484 3957 aa2.86□□□□□ -1.95
SPTLC3-205ENST00000476791 SPRR1AP35321 89 aa2.85□□□□□ -1.95
SPTLC3-205ENST00000476791 CCDC168Q8NDH2 2452 aa2.84□□□□□ -1.95
SPTLC3-205ENST00000476791 BSNQ9UPA5 3926 aa2.84□□□□□ -1.95
SPTLC3-205ENST00000476791 MAP1AP78559 2803 aaPredicted RBP2.84□□□□□ -1.95
SPTLC3-205ENST00000476791 ADGRG4Q8IZF6 3080 aa2.84□□□□□ -1.96
SPTLC3-205ENST00000476791 RP1L1Q8IWN7 2480 aaPredicted RBP2.83□□□□□ -1.96
SPTLC3-205ENST00000476791 STAB1Q9NY15 2570 aa2.82□□□□□ -1.96
SPTLC3-205ENST00000476791 A0A0D9SG42 100 aa2.82□□□□□ -1.96
SPTLC3-205ENST00000476791 ATRQ13535 2644 aa2.82□□□□□ -1.96
SPTLC3-205ENST00000476791 CSMD2Q7Z408 3487 aa2.82□□□□□ -1.96
SPTLC3-205ENST00000476791 COL6A5A8TX70 2615 aa2.81□□□□□ -1.96
SPTLC3-205ENST00000476791 KRTAP13-2Q52LG2 175 aa2.81□□□□□ -1.96
SPTLC3-205ENST00000476791 PP632Q6XCG6 107 aa2.81□□□□□ -1.96
SPTLC3-205ENST00000476791 SMR3AQ99954 134 aa2.81□□□□□ -1.96
SPTLC3-205ENST00000476791 CENPEQ02224 2701 aa2.81□□□□□ -1.96
SPTLC3-205ENST00000476791 S4R3F8 94 aa2.81□□□□□ -1.96
SPTLC3-205ENST00000476791 USMG5Q96IX5 58 aa2.8□□□□□ -1.96
SPTLC3-205ENST00000476791 TACC2O95359 2948 aa2.8□□□□□ -1.96
SPTLC3-205ENST00000476791 SPRR1BP22528 89 aa2.79□□□□□ -1.96
SPTLC3-205ENST00000476791 KRTAP13-4Q3LI77 160 aa2.79□□□□□ -1.96
SPTLC3-205ENST00000476791 BIRC6Q9NR09 4857 aa2.79□□□□□ -1.96
SPTLC3-205ENST00000476791 ACANP16112 2415 aa2.78□□□□□ -1.96
SPTLC3-205ENST00000476791 BRD3OSQ6XYD6 125 aa2.78□□□□□ -1.96
SPTLC3-205ENST00000476791 NIPBLQ6KC79 2804 aaeCLIP2.78□□□□□ -1.97
SPTLC3-205ENST00000476791 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
SPTLC3-205ENST00000476791 FLNAP21333 2647 aaKnown RBP2.76□□□□□ -1.97
SPTLC3-205ENST00000476791 UTP20O75691 2785 aaKnown RBP2.76□□□□□ -1.97
SPTLC3-205ENST00000476791 NBEAL1Q6ZS30 2694 aa2.75□□□□□ -1.97
SPTLC3-205ENST00000476791 MXRA5Q9NR99 2828 aa2.75□□□□□ -1.97
SPTLC3-205ENST00000476791 NOP10Q9NPE3 64 aaKnown RBP2.75□□□□□ -1.97
SPTLC3-205ENST00000476791 A0A096LNI7 61 aa2.74□□□□□ -1.97
SPTLC3-205ENST00000476791 KRTAP10-5P60370 271 aa2.74□□□□□ -1.97
SPTLC3-205ENST00000476791 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
SPTLC3-205ENST00000476791 MEGF8Q7Z7M0 2845 aa2.74□□□□□ -1.97
SPTLC3-205ENST00000476791 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
SPTLC3-205ENST00000476791 ANK3Q12955 4377 aaKnown RBP2.72□□□□□ -1.97
SPTLC3-205ENST00000476791 H3BUA1 57 aa2.71□□□□□ -1.98
SPTLC3-205ENST00000476791 A0A096LPF7 62 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms