RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 SNCGO76070 127 aa5.28□□□□□ -1.56
BRCA1-213ENST00000476777 SNRPEP62304 92 aaKnown RBP5.28□□□□□ -1.56
BRCA1-213ENST00000476777 COA6Q5JTJ3 125 aaKnown RBP5.28□□□□□ -1.56
BRCA1-213ENST00000476777 WFDC13Q8IUB5 93 aa5.28□□□□□ -1.56
BRCA1-213ENST00000476777 A6NN06 94 aa5.27□□□□□ -1.57
BRCA1-213ENST00000476777 FABP2P12104 132 aa5.27□□□□□ -1.57
BRCA1-213ENST00000476777 C8orf87E5RJ46 101 aa5.26□□□□□ -1.57
BRCA1-213ENST00000476777 H0YGX0 51 aa5.26□□□□□ -1.57
BRCA1-213ENST00000476777 KRTAP5-9P26371 169 aa5.26□□□□□ -1.57
BRCA1-213ENST00000476777 A0A1B0GVX0 72 aa5.25□□□□□ -1.57
BRCA1-213ENST00000476777 ANKRD29Q8N6D5 301 aa5.25□□□□□ -1.57
BRCA1-213ENST00000476777 RAB37Q96AX2 223 aa5.25□□□□□ -1.57
BRCA1-213ENST00000476777 HIST1H4GQ99525 98 aa5.23□□□□□ -1.57
BRCA1-213ENST00000476777 A0A1B0GX51 115 aa5.21□□□□□ -1.58
BRCA1-213ENST00000476777 A0A1B0GV72 72 aa5.2□□□□□ -1.58
BRCA1-213ENST00000476777 CCKP06307 115 aa5.2□□□□□ -1.58
BRCA1-213ENST00000476777 MT1BP07438 61 aa5.2□□□□□ -1.58
BRCA1-213ENST00000476777 H1FX-AS1Q4G0G2 97 aa5.2□□□□□ -1.58
BRCA1-213ENST00000476777 HSBP1L1C9JCN9 74 aa5.19□□□□□ -1.58
BRCA1-213ENST00000476777 TRACP01848 142 aa5.19□□□□□ -1.58
BRCA1-213ENST00000476777 KRTAP2-3P0C7H8 128 aa5.19□□□□□ -1.58
BRCA1-213ENST00000476777 KRTAP2-4Q9BYR9 128 aa5.19□□□□□ -1.58
BRCA1-213ENST00000476777 A0A0B4J2C4 111 aa5.16□□□□□ -1.58
BRCA1-213ENST00000476777 KRTAP10-5P60370 271 aa5.15□□□□□ -1.59
BRCA1-213ENST00000476777 LYRM7Q5U5X0 104 aa5.15□□□□□ -1.59
BRCA1-213ENST00000476777 Q5VV11 94 aa5.14□□□□□ -1.59
BRCA1-213ENST00000476777 ORMDL1Q9P0S3 153 aa5.14□□□□□ -1.59
BRCA1-213ENST00000476777 KRTAP19-8Q3LI54 63 aa5.13□□□□□ -1.59
BRCA1-213ENST00000476777 IGKV3D-7A0A0C4DH55 119 aa5.12□□□□□ -1.59
BRCA1-213ENST00000476777 H3BQ85 93 aa5.12□□□□□ -1.59
BRCA1-213ENST00000476777 J3KT08 172 aa5.12□□□□□ -1.59
BRCA1-213ENST00000476777 COX8AP10176 69 aa5.12□□□□□ -1.59
BRCA1-213ENST00000476777 TMEM256-PLSCR3K7ERE1 68 aa5.11□□□□□ -1.59
BRCA1-213ENST00000476777 TRIAP1O43715 76 aa5.11□□□□□ -1.59
BRCA1-213ENST00000476777 C9orf118A6NHY6 69 aa5.1□□□□□ -1.59
BRCA1-213ENST00000476777 DLEU1O43261 78 aa5.1□□□□□ -1.59
BRCA1-213ENST00000476777 DNAL4O96015 105 aa5.1□□□□□ -1.59
BRCA1-213ENST00000476777 DSCR8Q96T75 97 aa5.1□□□□□ -1.59
BRCA1-213ENST00000476777 HIST1H2BLQ99880 126 aa5.1□□□□□ -1.59
BRCA1-213ENST00000476777 VPS25Q9BRG1 176 aa5.1□□□□□ -1.59
BRCA1-213ENST00000476777 SPRR2GQ9BYE4 73 aa5.09□□□□□ -1.59
BRCA1-213ENST00000476777 C8orf17Q9NRJ1 99 aa5.09□□□□□ -1.59
BRCA1-213ENST00000476777 PRO1854Q9UHT4 67 aa5.09□□□□□ -1.59
BRCA1-213ENST00000476777 NDUFB1O75438 58 aa5.08□□□□□ -1.6
BRCA1-213ENST00000476777 HIST3H2BBQ8N257 126 aa5.08□□□□□ -1.6
BRCA1-213ENST00000476777 UBE2V1Q13404 147 aa5.07□□□□□ -1.6
BRCA1-213ENST00000476777 HIGD1BQ9P298 99 aa5.07□□□□□ -1.6
BRCA1-213ENST00000476777 FAM236AA0A1B0GUQ0 79 aa5.06□□□□□ -1.6
BRCA1-213ENST00000476777 FAM236BA0A1B0GV22 79 aa5.06□□□□□ -1.6
BRCA1-213ENST00000476777 Q6ZVQ6 151 aa5.06□□□□□ -1.6
BRCA1-213ENST00000476777 S100A2P29034 98 aa5.04□□□□□ -1.6
BRCA1-213ENST00000476777 RBM3P98179 157 aaKnown RBP5.04□□□□□ -1.6
BRCA1-213ENST00000476777 Q6ZQT0 140 aa5.04□□□□□ -1.6
BRCA1-213ENST00000476777 CEND1Q8N111 149 aa5.04□□□□□ -1.6
BRCA1-213ENST00000476777 C14orf144Q96I85 54 aa5.04□□□□□ -1.6
BRCA1-213ENST00000476777 C2orf91Q6ZV80 131 aa5.03□□□□□ -1.6
BRCA1-213ENST00000476777 C21orf62-AS1Q17RA5 79 aa5.02□□□□□ -1.61
BRCA1-213ENST00000476777 SPRR2EP22531 72 aa5.01□□□□□ -1.61
BRCA1-213ENST00000476777 SPRR2BP35325 72 aa5.01□□□□□ -1.61
BRCA1-213ENST00000476777 SPRR2AP35326 72 aa5.01□□□□□ -1.61
BRCA1-213ENST00000476777 FXYD2P54710 66 aa5.01□□□□□ -1.61
BRCA1-213ENST00000476777 C5orf47Q569G3 176 aa5.01□□□□□ -1.61
BRCA1-213ENST00000476777 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
BRCA1-213ENST00000476777 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
BRCA1-213ENST00000476777 KRTAP2-1Q9BYU5 128 aa5□□□□□ -1.61
BRCA1-213ENST00000476777 IGKV2D-30A0A075B6S6 120 aa4.99□□□□□ -1.61
BRCA1-213ENST00000476777 IGKV2-30P06310 120 aa4.99□□□□□ -1.61
BRCA1-213ENST00000476777 PSMB2P49721 201 aa4.99□□□□□ -1.61
BRCA1-213ENST00000476777 C9JAW5 83 aa4.98□□□□□ -1.61
BRCA1-213ENST00000476777 PRR15Q8IV56 129 aa4.98□□□□□ -1.61
BRCA1-213ENST00000476777 TMEM254Q8TBM7 123 aa4.98□□□□□ -1.61
BRCA1-213ENST00000476777 MRPL34Q9BQ48 92 aaKnown RBP4.98□□□□□ -1.61
BRCA1-213ENST00000476777 COX6CP09669 75 aa4.97□□□□□ -1.61
BRCA1-213ENST00000476777 MMP24-AS1A0A0U1RRL7 71 aa4.96□□□□□ -1.62
BRCA1-213ENST00000476777 C7orf65Q6ZTY9 151 aa4.96□□□□□ -1.62
BRCA1-213ENST00000476777 K7ERJ3 54 aa4.95□□□□□ -1.62
BRCA1-213ENST00000476777 C4orf26Q17RF5 130 aa4.95□□□□□ -1.62
BRCA1-213ENST00000476777 SPATA45Q537H7 98 aa4.95□□□□□ -1.62
BRCA1-213ENST00000476777 IMUPQ9GZP8 106 aa4.95□□□□□ -1.62
BRCA1-213ENST00000476777 PAM16Q9Y3D7 125 aa4.95□□□□□ -1.62
BRCA1-213ENST00000476777 Q5W150 140 aa4.94□□□□□ -1.62
BRCA1-213ENST00000476777 NDUFS5O43920 106 aa4.93□□□□□ -1.62
BRCA1-213ENST00000476777 hDV103S1A0JD37 113 aa4.92□□□□□ -1.62
BRCA1-213ENST00000476777 KLKP1Q107X0 134 aa4.92□□□□□ -1.62
BRCA1-213ENST00000476777 CSAG1Q6PB30 78 aa4.92□□□□□ -1.62
BRCA1-213ENST00000476777 A0A1B0GW54 56 aa4.91□□□□□ -1.62
BRCA1-213ENST00000476777 BAALC-AS2P0C853 105 aa4.91□□□□□ -1.62
BRCA1-213ENST00000476777 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
BRCA1-213ENST00000476777 S100A6P06703 90 aa4.9□□□□□ -1.63
BRCA1-213ENST00000476777 S4R3F8 94 aa4.9□□□□□ -1.63
BRCA1-213ENST00000476777 LOC110117498A0A087WWA1 95 aa4.88□□□□□ -1.63
BRCA1-213ENST00000476777 LCA10Q71F78 164 aa4.88□□□□□ -1.63
BRCA1-213ENST00000476777 VAMP8Q9BV40 100 aa4.88□□□□□ -1.63
BRCA1-213ENST00000476777 K7EQZ3 153 aa4.86□□□□□ -1.63
BRCA1-213ENST00000476777 SCGB1C2P0DMR2 95 aa4.86□□□□□ -1.63
BRCA1-213ENST00000476777 HSD52Q0P140 79 aa4.86□□□□□ -1.63
BRCA1-213ENST00000476777 SPRR2DP22532 72 aa4.85□□□□□ -1.63
BRCA1-213ENST00000476777 NREPQ16612 68 aa4.85□□□□□ -1.63
BRCA1-213ENST00000476777 GPR98Q8WXG9 6306 aa4.85□□□□□ -1.63
BRCA1-213ENST00000476777 JMJD7-PLA2G4BH0Y9G9 81 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 672.9 ms