RNA–Protein interactions for RNA: ENST00000476650.2

ALMS1-203, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 239 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-203ENST00000476650 HMCN2Q8NDA2 5059 aa0.18□□□□□ -2.38
ALMS1-203ENST00000476650 ABCA5Q8WWZ7 1642 aa0.18□□□□□ -2.38
ALMS1-203ENST00000476650 C9orf92A6NGG3 77 aa0.18□□□□□ -2.38
ALMS1-203ENST00000476650 DEFB110Q30KQ9 67 aa0.18□□□□□ -2.38
ALMS1-203ENST00000476650 TOMM5Q8N4H5 51 aa0.18□□□□□ -2.38
ALMS1-203ENST00000476650 NBASA2RRP1 2371 aa0.18□□□□□ -2.38
ALMS1-203ENST00000476650 DMXL1Q9Y485 3027 aa0.18□□□□□ -2.38
ALMS1-203ENST00000476650 NF1P21359 2839 aa0.18□□□□□ -2.38
ALMS1-203ENST00000476650 KMT2DO14686 5537 aa0.17□□□□□ -2.38
ALMS1-203ENST00000476650 IQGAP1P46940 1657 aa0.17□□□□□ -2.38
ALMS1-203ENST00000476650 FLNCQ14315 2725 aa0.16□□□□□ -2.38
ALMS1-203ENST00000476650 SPTBN4Q9H254 2564 aa0.16□□□□□ -2.38
ALMS1-203ENST00000476650 LPAP08519 4548 aa0.16□□□□□ -2.38
ALMS1-203ENST00000476650 HSPG2P98160 4391 aa0.16□□□□□ -2.38
ALMS1-203ENST00000476650 SMIM2Q9BVW6 85 aa0.16□□□□□ -2.38
ALMS1-203ENST00000476650 M0QY20 66 aa0.15□□□□□ -2.39
ALMS1-203ENST00000476650 KALRNO60229 2985 aa0.15□□□□□ -2.39
ALMS1-203ENST00000476650 KRTAP6-2Q3LI66 62 aa0.15□□□□□ -2.39
ALMS1-203ENST00000476650 CREBBPQ92793 2442 aa0.15□□□□□ -2.39
ALMS1-203ENST00000476650 DMBT1Q9UGM3 2413 aaPredicted RBP0.15□□□□□ -2.39
ALMS1-203ENST00000476650 FAM208AQ9UK61 1670 aaKnown RBP0.14□□□□□ -2.39
ALMS1-203ENST00000476650 MAP1AP78559 2803 aaPredicted RBP0.14□□□□□ -2.39
ALMS1-203ENST00000476650 ZZEF1O43149 2961 aa0.14□□□□□ -2.39
ALMS1-203ENST00000476650 GCN1Q92616 2671 aaKnown RBP0.14□□□□□ -2.39
ALMS1-203ENST00000476650 SRRM2Q9UQ35 2752 aaKnown RBP0.14□□□□□ -2.39
ALMS1-203ENST00000476650 CEP290O15078 2479 aa0.13□□□□□ -2.39
ALMS1-203ENST00000476650 KIF21BO75037 1637 aa0.13□□□□□ -2.39
ALMS1-203ENST00000476650 MMP24-AS1A0A0U1RRL7 71 aa0.13□□□□□ -2.39
ALMS1-203ENST00000476650 LINC01546A6NGU7 62 aa0.13□□□□□ -2.39
ALMS1-203ENST00000476650 PKD1L2Q7Z442 2459 aa0.13□□□□□ -2.39
ALMS1-203ENST00000476650 HECTD4Q9Y4D8 3996 aa0.13□□□□□ -2.39
ALMS1-203ENST00000476650 VPS13BQ7Z7G8 4022 aa0.12□□□□□ -2.39
ALMS1-203ENST00000476650 COL6A3P12111 3177 aa0.12□□□□□ -2.39
ALMS1-203ENST00000476650 TENM2Q9NT68 2774 aa0.11□□□□□ -2.39
ALMS1-203ENST00000476650 SETD2Q9BYW2 2564 aaPredicted RBP0.11□□□□□ -2.39
ALMS1-203ENST00000476650 FLNAP21333 2647 aaKnown RBP0.11□□□□□ -2.39
ALMS1-203ENST00000476650 NFAT5O94916 1531 aa0.11□□□□□ -2.39
ALMS1-203ENST00000476650 ZANQ9Y493 2812 aa0.1□□□□□ -2.39
ALMS1-203ENST00000476650 SVEP1Q4LDE5 3571 aa0.1□□□□□ -2.39
ALMS1-203ENST00000476650 HTTP42858 3142 aa0.1□□□□□ -2.39
ALMS1-203ENST00000476650 TACC2O95359 2948 aa0.1□□□□□ -2.39
ALMS1-203ENST00000476650 TNP1P09430 55 aa0.1□□□□□ -2.39
ALMS1-203ENST00000476650 SPRR2AP35326 72 aa0.1□□□□□ -2.39
ALMS1-203ENST00000476650 PKD1P98161 4303 aa0.1□□□□□ -2.39
ALMS1-203ENST00000476650 IQGAP2Q13576 1575 aa0.09□□□□□ -2.4
ALMS1-203ENST00000476650 NDUFA1O15239 70 aa0.08□□□□□ -2.4
ALMS1-203ENST00000476650 DEFB131AP59861 70 aa0.08□□□□□ -2.4
ALMS1-203ENST00000476650 SONP18583 2426 aaKnown RBP0.08□□□□□ -2.4
ALMS1-203ENST00000476650 A0A0C4DFX4 3053 aa0.07□□□□□ -2.4
ALMS1-203ENST00000476650 CUBNO60494 3623 aa0.07□□□□□ -2.4
ALMS1-203ENST00000476650 AKAP9Q99996 3911 aa0.07□□□□□ -2.4
ALMS1-203ENST00000476650 HIVEP1P15822 2718 aa0.07□□□□□ -2.4
ALMS1-203ENST00000476650 STAB1Q9NY15 2570 aa0.06□□□□□ -2.4
ALMS1-203ENST00000476650 CLTCL1P53675 1640 aa0.06□□□□□ -2.4
ALMS1-203ENST00000476650 ANKRD11Q6UB99 2663 aaPredicted RBP0.06□□□□□ -2.4
ALMS1-203ENST00000476650 NBEAL1Q6ZS30 2694 aa0.06□□□□□ -2.4
ALMS1-203ENST00000476650 A8MTW9 85 aa0.06□□□□□ -2.4
ALMS1-203ENST00000476650 SPRR2EP22531 72 aa0.06□□□□□ -2.4
ALMS1-203ENST00000476650 POLR2KP53803 58 aaKnown RBP0.06□□□□□ -2.4
ALMS1-203ENST00000476650 LRP2P98164 4655 aa0.06□□□□□ -2.4
ALMS1-203ENST00000476650 PKHD1P08F94 4074 aa0.06□□□□□ -2.4
ALMS1-203ENST00000476650 MTORP42345 2549 aa0.06□□□□□ -2.4
ALMS1-203ENST00000476650 UTP20O75691 2785 aaKnown RBP0.06□□□□□ -2.4
ALMS1-203ENST00000476650 TGP01266 2768 aa0.05□□□□□ -2.4
ALMS1-203ENST00000476650 FLGP20930 4061 aaPredicted RBP0.05□□□□□ -2.4
ALMS1-203ENST00000476650 M0QZ58 72 aa0.05□□□□□ -2.4
ALMS1-203ENST00000476650 NBEAQ8NFP9 2946 aa0.05□□□□□ -2.4
ALMS1-203ENST00000476650 MT1AP04731 61 aa0.04□□□□□ -2.4
ALMS1-203ENST00000476650 SPART-AS1P0CW21 52 aa0.04□□□□□ -2.4
ALMS1-203ENST00000476650 CLPSL2Q6UWE3 100 aa0.04□□□□□ -2.4
ALMS1-203ENST00000476650 SPG11Q96JI7 2443 aa0.04□□□□□ -2.4
ALMS1-203ENST00000476650 LRP1BQ9NZR2 4599 aa0.03□□□□□ -2.4
ALMS1-203ENST00000476650 TRIOO75962 3097 aa0.03□□□□□ -2.4
ALMS1-203ENST00000476650 LRRK2Q5S007 2527 aa0.03□□□□□ -2.4
ALMS1-203ENST00000476650 FASNP49327 2511 aaKnown RBP0.03□□□□□ -2.41
ALMS1-203ENST00000476650 SACSQ9NZJ4 4579 aa0.02□□□□□ -2.41
ALMS1-203ENST00000476650 WDR87Q6ZQQ6 2873 aa0.02□□□□□ -2.41
ALMS1-203ENST00000476650 KRTAP19-7Q3SYF9 63 aa0.02□□□□□ -2.41
ALMS1-203ENST00000476650 SPRR2FQ96RM1 72 aa0.02□□□□□ -2.41
ALMS1-203ENST00000476650 NBEAL2Q6ZNJ1 2754 aa0.02□□□□□ -2.41
ALMS1-203ENST00000476650 TRPM2O94759 1503 aa0.02□□□□□ -2.41
ALMS1-203ENST00000476650 GPR98Q8WXG9 6306 aa0.02□□□□□ -2.41
ALMS1-203ENST00000476650 PKHD1L1Q86WI1 4243 aa0.02□□□□□ -2.41
ALMS1-203ENST00000476650 ANKHD1Q8IWZ3 2542 aaKnown RBP0.01□□□□□ -2.41
ALMS1-203ENST00000476650 COL6A5A8TX70 2615 aa0□□□□□ -2.41
ALMS1-203ENST00000476650 MXRA5Q9NR99 2828 aa0□□□□□ -2.41
ALMS1-203ENST00000476650 NBPF19A0A087WUL8 3843 aa0□□□□□ -2.41
ALMS1-203ENST00000476650 LAMA1P25391 3075 aa-0□□□□□ -2.41
ALMS1-203ENST00000476650 DNAH3Q8TD57 4116 aa-0.01□□□□□ -2.41
ALMS1-203ENST00000476650 TEP1Q99973 2627 aaKnown RBP-0.01□□□□□ -2.41
ALMS1-203ENST00000476650 RANBP2P49792 3224 aaKnown RBP-0.02□□□□□ -2.41
ALMS1-203ENST00000476650 ACACBO00763 2458 aa-0.02□□□□□ -2.41
ALMS1-203ENST00000476650 CCDC168Q8NDH2 2452 aa-0.02□□□□□ -2.41
ALMS1-203ENST00000476650 LAMA5O15230 3695 aa-0.02□□□□□ -2.41
ALMS1-203ENST00000476650 ACACAQ13085 2346 aa-0.03□□□□□ -2.41
ALMS1-203ENST00000476650 FRYQ5TBA9 3013 aa-0.03□□□□□ -2.41
ALMS1-203ENST00000476650 MYO18BQ8IUG5 2567 aa-0.03□□□□□ -2.41
ALMS1-203ENST00000476650 DEFB1P60022 68 aa-0.03□□□□□ -2.41
ALMS1-203ENST00000476650 COL12A1Q99715 3063 aa-0.03□□□□□ -2.41
ALMS1-203ENST00000476650 MUC2Q02817 5179 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms