RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 C1orf195Q5TG92 126 aa13.23□□□□□ -0.29
CCDC7-206ENST00000476558 LIMD2Q9BT23 127 aa13.2□□□□□ -0.3
CCDC7-206ENST00000476558 SPINK1P00995 79 aa13.2□□□□□ -0.3
CCDC7-206ENST00000476558 NOTCH2NLQ7Z3S9 236 aa13.2□□□□□ -0.3
CCDC7-206ENST00000476558 C5orf47Q569G3 176 aa13.19□□□□□ -0.3
CCDC7-206ENST00000476558 H7BZZ5 65 aa13.18□□□□□ -0.3
CCDC7-206ENST00000476558 C4orf48Q5BLP8 95 aa13.18□□□□□ -0.3
CCDC7-206ENST00000476558 TMEM258P61165 79 aa13.17□□□□□ -0.3
CCDC7-206ENST00000476558 PKHD1L1Q86WI1 4243 aa13.15□□□□□ -0.3
CCDC7-206ENST00000476558 RPS29P62273 56 aaKnown RBP13.14□□□□□ -0.31
CCDC7-206ENST00000476558 LINC00304Q8N9R0 145 aa13.14□□□□□ -0.31
CCDC7-206ENST00000476558 FAM229AH3BQW9 127 aa13.13□□□□□ -0.31
CCDC7-206ENST00000476558 NDUFC1O43677 76 aa13.13□□□□□ -0.31
CCDC7-206ENST00000476558 SPAG11AQ6PDA7 123 aa13.13□□□□□ -0.31
CCDC7-206ENST00000476558 HSPG2P98160 4391 aa13.13□□□□□ -0.31
CCDC7-206ENST00000476558 ZCCHC13Q8WW36 166 aaKnown RBP13.11□□□□□ -0.31
CCDC7-206ENST00000476558 MRPL34Q9BQ48 92 aaKnown RBP13.1□□□□□ -0.31
CCDC7-206ENST00000476558 C8orf87E5RJ46 101 aa13.09□□□□□ -0.31
CCDC7-206ENST00000476558 TP53AIP1Q9HCN2 124 aa13.06□□□□□ -0.32
CCDC7-206ENST00000476558 RYR1P21817 5038 aa13.05□□□□□ -0.32
CCDC7-206ENST00000476558 Q5VSD8 79 aa13.05□□□□□ -0.32
CCDC7-206ENST00000476558 MP68P56378 58 aa13.03□□□□□ -0.32
CCDC7-206ENST00000476558 H0Y9P7 68 aa13.02□□□□□ -0.33
CCDC7-206ENST00000476558 LINC00313P59037 77 aa13.01□□□□□ -0.33
CCDC7-206ENST00000476558 KRTAP17-1Q9BYP8 105 aa13.01□□□□□ -0.33
CCDC7-206ENST00000476558 H3BPC8 53 aa13□□□□□ -0.33
CCDC7-206ENST00000476558 TRAV22A0A0B4J277 110 aa12.99□□□□□ -0.33
CCDC7-206ENST00000476558 LINC00208Q96KT6 92 aa12.97□□□□□ -0.33
CCDC7-206ENST00000476558 FAM236DA0A1B0GTK5 79 aa12.97□□□□□ -0.33
CCDC7-206ENST00000476558 NDUFS5O43920 106 aa12.97□□□□□ -0.33
CCDC7-206ENST00000476558 FAM236CP0DP71 79 aa12.97□□□□□ -0.33
CCDC7-206ENST00000476558 KRTAP16-1A8MUX0 517 aa12.94□□□□□ -0.34
CCDC7-206ENST00000476558 Q8N9P0 234 aaPredicted RBP12.92□□□□□ -0.34
CCDC7-206ENST00000476558 C1orf64Q8NEQ6 169 aa12.9□□□□□ -0.34
CCDC7-206ENST00000476558 KRTAP10-8P60410 259 aa12.9□□□□□ -0.34
CCDC7-206ENST00000476558 KIAA1109Q2LD37 5005 aa12.89□□□□□ -0.35
CCDC7-206ENST00000476558 RPS28P62857 69 aaKnown RBP12.89□□□□□ -0.35
CCDC7-206ENST00000476558 ATP5EP56381 51 aaPredicted RBP12.88□□□□□ -0.35
CCDC7-206ENST00000476558 KRTAP13-3Q3SY46 172 aa12.88□□□□□ -0.35
CCDC7-206ENST00000476558 EPPK1P58107 5090 aaKnown RBP12.87□□□□□ -0.35
CCDC7-206ENST00000476558 Q5W150 140 aa12.85□□□□□ -0.35
CCDC7-206ENST00000476558 LRP1Q07954 4544 aaKnown RBP12.85□□□□□ -0.35
CCDC7-206ENST00000476558 Q8N1X5 172 aa12.84□□□□□ -0.35
CCDC7-206ENST00000476558 TNXBP22105 4242 aa12.84□□□□□ -0.35
CCDC7-206ENST00000476558 FLG2Q5D862 2391 aaPredicted RBP12.8□□□□□ -0.36
CCDC7-206ENST00000476558 FAT3Q8TDW7 4589 aa12.77□□□□□ -0.37
CCDC7-206ENST00000476558 SERP1Q9Y6X1 66 aa12.76□□□□□ -0.37
CCDC7-206ENST00000476558 OXTP01178 125 aa12.76□□□□□ -0.37
CCDC7-206ENST00000476558 SPANXA2-OT1Q8N9U9 137 aa12.72□□□□□ -0.37
CCDC7-206ENST00000476558 RETNLBQ9BQ08 111 aa12.72□□□□□ -0.37
CCDC7-206ENST00000476558 LOC101927531A0A1B0GV80 90 aa12.71□□□□□ -0.38
CCDC7-206ENST00000476558 CYP4F30PQ9H0H9 118 aa12.7□□□□□ -0.38
CCDC7-206ENST00000476558 MT1HL1P0DM35 61 aa12.66□□□□□ -0.38
CCDC7-206ENST00000476558 PCOTHQ58A44 107 aa12.65□□□□□ -0.39
CCDC7-206ENST00000476558 IGLV7-46A0A075B6I9 117 aa12.62□□□□□ -0.39
CCDC7-206ENST00000476558 PRR4Q16378 134 aa12.62□□□□□ -0.39
CCDC7-206ENST00000476558 C9orf92A6NGG3 77 aa12.61□□□□□ -0.39
CCDC7-206ENST00000476558 C20orf166-AS1Q96NR2 134 aa12.6□□□□□ -0.39
CCDC7-206ENST00000476558 MYCBP2O75592 4640 aa12.59□□□□□ -0.39
CCDC7-206ENST00000476558 A8MUU9 505 aa12.58□□□□□ -0.4
CCDC7-206ENST00000476558 IGKV2-30P06310 120 aa12.58□□□□□ -0.4
CCDC7-206ENST00000476558 FP248Q71RG6 208 aaPredicted RBP12.54□□□□□ -0.4
CCDC7-206ENST00000476558 DMBT1Q9UGM3 2413 aaPredicted RBP12.54□□□□□ -0.4
CCDC7-206ENST00000476558 KRTAP4-5Q9BYR2 181 aa12.53□□□□□ -0.4
CCDC7-206ENST00000476558 SMIM26A0A096LP01 95 aa12.46□□□□□ -0.41
CCDC7-206ENST00000476558 HRES1P13985 223 aa12.44□□□□□ -0.42
CCDC7-206ENST00000476558 Q75L30 129 aa12.43□□□□□ -0.42
CCDC7-206ENST00000476558 IGKV2D-30A0A075B6S6 120 aa12.42□□□□□ -0.42
CCDC7-206ENST00000476558 C7orf65Q6ZTY9 151 aa12.35□□□□□ -0.43
CCDC7-206ENST00000476558 COA5Q86WW8 74 aa12.34□□□□□ -0.43
CCDC7-206ENST00000476558 DMAC1Q96GE9 116 aa12.31□□□□□ -0.44
CCDC7-206ENST00000476558 BIRC6Q9NR09 4857 aa12.27□□□□□ -0.44
CCDC7-206ENST00000476558 XP32Q5T750 250 aa12.27□□□□□ -0.45
CCDC7-206ENST00000476558 ACYP2P14621 99 aa12.24□□□□□ -0.45
CCDC7-206ENST00000476558 RPL37P61927 97 aaKnown RBP12.24□□□□□ -0.45
CCDC7-206ENST00000476558 HERC2O95714 4834 aa12.23□□□□□ -0.45
CCDC7-206ENST00000476558 C4orf26Q17RF5 130 aa12.23□□□□□ -0.45
CCDC7-206ENST00000476558 ABCA13Q86UQ4 5058 aa12.22□□□□□ -0.45
CCDC7-206ENST00000476558 SPINK7P58062 85 aa12.2□□□□□ -0.46
CCDC7-206ENST00000476558 Q1T7F1 81 aa12.2□□□□□ -0.46
CCDC7-206ENST00000476558 MPLKIPQ8TAP9 179 aa12.19□□□□□ -0.46
CCDC7-206ENST00000476558 ATP11AUNQ6ZP68 121 aa12.18□□□□□ -0.46
CCDC7-206ENST00000476558 TPRXLQ17RH7 258 aa12.16□□□□□ -0.46
CCDC7-206ENST00000476558 A8MUN3 132 aa12.07□□□□□ -0.48
CCDC7-206ENST00000476558 V9GYY9 64 aa12.07□□□□□ -0.48
CCDC7-206ENST00000476558 J3QL48 77 aa12.03□□□□□ -0.48
CCDC7-206ENST00000476558 KRTAP3-1Q9BYR8 98 aa12.02□□□□□ -0.48
CCDC7-206ENST00000476558 CHKB-CPT1BH3BT56 60 aa12□□□□□ -0.49
CCDC7-206ENST00000476558 LINC01558Q9Y6Z2 57 aa11.95□□□□□ -0.5
CCDC7-206ENST00000476558 LRP2P98164 4655 aa11.94□□□□□ -0.5
CCDC7-206ENST00000476558 COX6B2Q6YFQ2 88 aa11.93□□□□□ -0.5
CCDC7-206ENST00000476558 PSPHP1O15172 72 aa11.93□□□□□ -0.5
CCDC7-206ENST00000476558 LPAP08519 4548 aa11.92□□□□□ -0.5
CCDC7-206ENST00000476558 Q5VV11 94 aa11.86□□□□□ -0.51
CCDC7-206ENST00000476558 PRR15LQ9BU68 103 aa11.85□□□□□ -0.51
CCDC7-206ENST00000476558 SPTSSBQ8NFR3 76 aa11.7□□□□□ -0.54
CCDC7-206ENST00000476558 SEC61BP60468 96 aaKnown RBP11.68□□□□□ -0.54
CCDC7-206ENST00000476558 PCLOQ9Y6V0 5065 aa11.66□□□□□ -0.54
CCDC7-206ENST00000476558 A0A1B0GU69 56 aa11.63□□□□□ -0.55
CCDC7-206ENST00000476558 BRK1Q8WUW1 75 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms