RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 C4orf48Q5BLP8 95 aa3.67□□□□□ -1.82
CLDN4-205ENST00000476494 SPAG11AQ6PDA7 123 aa3.67□□□□□ -1.82
CLDN4-205ENST00000476494 TYMSOSQ8TAI1 123 aa3.67□□□□□ -1.82
CLDN4-205ENST00000476494 RETNLBQ9BQ08 111 aa3.67□□□□□ -1.82
CLDN4-205ENST00000476494 SS18L2Q9UHA2 77 aa3.67□□□□□ -1.82
CLDN4-205ENST00000476494 NEBP20929 6669 aa3.67□□□□□ -1.82
CLDN4-205ENST00000476494 SPINK1P00995 79 aa3.66□□□□□ -1.82
CLDN4-205ENST00000476494 NREPQ16612 68 aa3.66□□□□□ -1.82
CLDN4-205ENST00000476494 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
CLDN4-205ENST00000476494 KRTAP13-2Q52LG2 175 aa3.66□□□□□ -1.82
CLDN4-205ENST00000476494 LINC00643Q86TS7 51 aa3.66□□□□□ -1.82
CLDN4-205ENST00000476494 LINC00846Q9NV44 126 aa3.66□□□□□ -1.82
CLDN4-205ENST00000476494 IGLV7-46A0A075B6I9 117 aa3.65□□□□□ -1.83
CLDN4-205ENST00000476494 RPS29P62273 56 aaKnown RBP3.65□□□□□ -1.83
CLDN4-205ENST00000476494 ATP5EP2Q5VTU8 51 aa3.65□□□□□ -1.83
CLDN4-205ENST00000476494 Q5XG85 94 aa3.65□□□□□ -1.83
CLDN4-205ENST00000476494 A0A087WSZ3 146 aa3.64□□□□□ -1.83
CLDN4-205ENST00000476494 Q6ZVQ6 151 aa3.64□□□□□ -1.83
CLDN4-205ENST00000476494 LIMD2Q9BT23 127 aa3.64□□□□□ -1.83
CLDN4-205ENST00000476494 A0A0G2JQZ4 141 aa3.63□□□□□ -1.83
CLDN4-205ENST00000476494 J3KT08 172 aa3.63□□□□□ -1.83
CLDN4-205ENST00000476494 CXCL6P80162 114 aa3.63□□□□□ -1.83
CLDN4-205ENST00000476494 LINC00304Q8N9R0 145 aa3.63□□□□□ -1.83
CLDN4-205ENST00000476494 SIGMAR1Q99720 223 aa3.62□□□□□ -1.83
CLDN4-205ENST00000476494 IMUPQ9GZP8 106 aa3.62□□□□□ -1.83
CLDN4-205ENST00000476494 BPY2O14599 106 aa3.61□□□□□ -1.83
CLDN4-205ENST00000476494 HRCT1Q6UXD1 115 aa3.61□□□□□ -1.83
CLDN4-205ENST00000476494 LINC00472Q9H8W2 130 aa3.61□□□□□ -1.83
CLDN4-205ENST00000476494 MUC12Q9UKN1 5478 aa3.6□□□□□ -1.83
CLDN4-205ENST00000476494 LCE2BO14633 110 aa3.59□□□□□ -1.83
CLDN4-205ENST00000476494 SEC61BP60468 96 aaKnown RBP3.59□□□□□ -1.83
CLDN4-205ENST00000476494 KRTAP13-3Q3SY46 172 aa3.59□□□□□ -1.83
CLDN4-205ENST00000476494 NDUFB1O75438 58 aa3.58□□□□□ -1.84
CLDN4-205ENST00000476494 IGKV3D-7A0A0C4DH55 119 aa3.57□□□□□ -1.84
CLDN4-205ENST00000476494 A8MWP4 228 aa3.57□□□□□ -1.84
CLDN4-205ENST00000476494 MT-ATP8P03928 68 aa3.57□□□□□ -1.84
CLDN4-205ENST00000476494 IGKV4-1P06312 121 aa3.57□□□□□ -1.84
CLDN4-205ENST00000476494 KRTAP9-8Q9BYQ0 159 aa3.57□□□□□ -1.84
CLDN4-205ENST00000476494 DSCR10P59022 87 aa3.56□□□□□ -1.84
CLDN4-205ENST00000476494 C1orf195Q5TG92 126 aa3.56□□□□□ -1.84
CLDN4-205ENST00000476494 Q96NJ1 140 aa3.56□□□□□ -1.84
CLDN4-205ENST00000476494 M0R2T5 61 aa3.55□□□□□ -1.84
CLDN4-205ENST00000476494 HIST1H4AP62805 103 aaKnown RBP3.55□□□□□ -1.84
CLDN4-205ENST00000476494 PRR15Q8IV56 129 aa3.55□□□□□ -1.84
CLDN4-205ENST00000476494 DEFB116Q30KQ4 102 aa3.54□□□□□ -1.84
CLDN4-205ENST00000476494 A0A1B0GVX0 72 aa3.53□□□□□ -1.84
CLDN4-205ENST00000476494 C8orf87E5RJ46 101 aa3.53□□□□□ -1.84
CLDN4-205ENST00000476494 K7EQZ3 153 aa3.53□□□□□ -1.84
CLDN4-205ENST00000476494 SCGB1A1P11684 91 aa3.53□□□□□ -1.84
CLDN4-205ENST00000476494 KRTAP19-6Q3LI70 58 aa3.53□□□□□ -1.84
CLDN4-205ENST00000476494 FP248Q71RG6 208 aaPredicted RBP3.53□□□□□ -1.84
CLDN4-205ENST00000476494 HCG22E2RYF7 251 aa3.51□□□□□ -1.85
CLDN4-205ENST00000476494 Q8N9L7 120 aa3.51□□□□□ -1.85
CLDN4-205ENST00000476494 IGHV6-1A0A0B4J1U7 121 aa3.5□□□□□ -1.85
CLDN4-205ENST00000476494 LINC00313P59037 77 aa3.5□□□□□ -1.85
CLDN4-205ENST00000476494 XP32Q5T750 250 aa3.5□□□□□ -1.85
CLDN4-205ENST00000476494 SMIM20Q8N5G0 67 aa3.5□□□□□ -1.85
CLDN4-205ENST00000476494 C8orf17Q9NRJ1 99 aa3.5□□□□□ -1.85
CLDN4-205ENST00000476494 A0A087WVE0 104 aa3.49□□□□□ -1.85
CLDN4-205ENST00000476494 ATOX1O00244 68 aa3.49□□□□□ -1.85
CLDN4-205ENST00000476494 CASC2Q6XLA1 102 aa3.49□□□□□ -1.85
CLDN4-205ENST00000476494 KMT2DO14686 5537 aa3.48□□□□□ -1.85
CLDN4-205ENST00000476494 MMP24-AS1A0A0U1RRL7 71 aa3.48□□□□□ -1.85
CLDN4-205ENST00000476494 FAM236AA0A1B0GUQ0 79 aa3.48□□□□□ -1.85
CLDN4-205ENST00000476494 FAM236BA0A1B0GV22 79 aa3.48□□□□□ -1.85
CLDN4-205ENST00000476494 hDV103S1A0JD37 113 aa3.48□□□□□ -1.85
CLDN4-205ENST00000476494 TMEM254Q8TBM7 123 aa3.48□□□□□ -1.85
CLDN4-205ENST00000476494 MRPL34Q9BQ48 92 aaKnown RBP3.47□□□□□ -1.85
CLDN4-205ENST00000476494 KRTAP9-3Q9BYQ3 159 aa3.47□□□□□ -1.85
CLDN4-205ENST00000476494 TP53AIP1Q9HCN2 124 aa3.47□□□□□ -1.85
CLDN4-205ENST00000476494 WFDC13Q8IUB5 93 aa3.46□□□□□ -1.86
CLDN4-205ENST00000476494 TRAV7A0A075B6U4 112 aa3.45□□□□□ -1.86
CLDN4-205ENST00000476494 UQCRQO14949 82 aa3.44□□□□□ -1.86
CLDN4-205ENST00000476494 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
CLDN4-205ENST00000476494 NOTCH2NLQ7Z3S9 236 aa3.44□□□□□ -1.86
CLDN4-205ENST00000476494 SERP2Q8N6R1 65 aa3.44□□□□□ -1.86
CLDN4-205ENST00000476494 Q8N9P0 234 aaPredicted RBP3.44□□□□□ -1.86
CLDN4-205ENST00000476494 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
CLDN4-205ENST00000476494 KRTAP16-1A8MUX0 517 aa3.43□□□□□ -1.86
CLDN4-205ENST00000476494 C5orf47Q569G3 176 aa3.43□□□□□ -1.86
CLDN4-205ENST00000476494 ANAPC13Q9BS18 74 aa3.43□□□□□ -1.86
CLDN4-205ENST00000476494 OCR1Q9BZK8 76 aa3.43□□□□□ -1.86
CLDN4-205ENST00000476494 NDUFS5O43920 106 aa3.42□□□□□ -1.86
CLDN4-205ENST00000476494 PCOTHQ58A44 107 aa3.42□□□□□ -1.86
CLDN4-205ENST00000476494 A8MUU9 505 aa3.41□□□□□ -1.86
CLDN4-205ENST00000476494 MT2AP02795 61 aa3.41□□□□□ -1.86
CLDN4-205ENST00000476494 C20orf166-AS1Q96NR2 134 aa3.41□□□□□ -1.86
CLDN4-205ENST00000476494 C9orf92A6NGG3 77 aa3.4□□□□□ -1.87
CLDN4-205ENST00000476494 H3BPC8 53 aa3.4□□□□□ -1.87
CLDN4-205ENST00000476494 COX7CP15954 63 aa3.4□□□□□ -1.87
CLDN4-205ENST00000476494 MP68P56378 58 aa3.4□□□□□ -1.87
CLDN4-205ENST00000476494 Q75L30 129 aa3.4□□□□□ -1.87
CLDN4-205ENST00000476494 MT1FP04733 61 aa3.39□□□□□ -1.87
CLDN4-205ENST00000476494 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
CLDN4-205ENST00000476494 TRAV22A0A0B4J277 110 aa3.38□□□□□ -1.87
CLDN4-205ENST00000476494 PCP4P48539 62 aa3.37□□□□□ -1.87
CLDN4-205ENST00000476494 RPL37P61927 97 aaKnown RBP3.37□□□□□ -1.87
CLDN4-205ENST00000476494 ATP11AUNQ6ZP68 121 aa3.37□□□□□ -1.87
CLDN4-205ENST00000476494 ZCCHC13Q8WW36 166 aaKnown RBP3.37□□□□□ -1.87
CLDN4-205ENST00000476494 LOC101927531A0A1B0GV80 90 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms