RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 RPL37AP61513 92 aaKnown RBP4.19□□□□□ -1.74
UBR4-212ENST00000475973 Q6ZRN7 208 aaPredicted RBP4.19□□□□□ -1.74
UBR4-212ENST00000475973 PCLOQ9Y6V0 5065 aa4.19□□□□□ -1.74
UBR4-212ENST00000475973 LRCOL1A6NCL2 159 aa4.18□□□□□ -1.74
UBR4-212ENST00000475973 A8MWP4 228 aa4.18□□□□□ -1.74
UBR4-212ENST00000475973 C1orf195Q5TG92 126 aa4.18□□□□□ -1.74
UBR4-212ENST00000475973 DNAH11Q96DT5 4516 aa4.17□□□□□ -1.74
UBR4-212ENST00000475973 A0A087WSZ3 146 aa4.17□□□□□ -1.74
UBR4-212ENST00000475973 A0A087WTM6 91 aa4.17□□□□□ -1.74
UBR4-212ENST00000475973 C14orf177Q52M58 125 aa4.17□□□□□ -1.74
UBR4-212ENST00000475973 LINC00483Q53H64 154 aa4.17□□□□□ -1.74
UBR4-212ENST00000475973 Q96NJ1 140 aa4.17□□□□□ -1.74
UBR4-212ENST00000475973 MMP24-AS1A0A0U1RRL7 71 aa4.16□□□□□ -1.74
UBR4-212ENST00000475973 CHTF8P0CG12 524 aa4.16□□□□□ -1.74
UBR4-212ENST00000475973 PRLHP81277 87 aa4.16□□□□□ -1.74
UBR4-212ENST00000475973 PKIGQ9Y2B9 76 aa4.16□□□□□ -1.74
UBR4-212ENST00000475973 DYNC1H1Q14204 4646 aaKnown RBP4.16□□□□□ -1.74
UBR4-212ENST00000475973 A0A0G2JQZ4 141 aa4.15□□□□□ -1.75
UBR4-212ENST00000475973 LCE3BQ5TA77 95 aa4.15□□□□□ -1.75
UBR4-212ENST00000475973 KRTAP4-5Q9BYR2 181 aa4.15□□□□□ -1.75
UBR4-212ENST00000475973 PKD1P98161 4303 aa4.15□□□□□ -1.75
UBR4-212ENST00000475973 RYR1P21817 5038 aa4.14□□□□□ -1.75
UBR4-212ENST00000475973 IGLV5-52A0A0A0MRZ9 124 aa4.14□□□□□ -1.75
UBR4-212ENST00000475973 CD164Q04900 197 aa4.14□□□□□ -1.75
UBR4-212ENST00000475973 MPLKIPQ8TAP9 179 aa4.14□□□□□ -1.75
UBR4-212ENST00000475973 IGLV7-46A0A075B6I9 117 aa4.13□□□□□ -1.75
UBR4-212ENST00000475973 UBE2AP49459 152 aa4.13□□□□□ -1.75
UBR4-212ENST00000475973 MP68P56378 58 aa4.13□□□□□ -1.75
UBR4-212ENST00000475973 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
UBR4-212ENST00000475973 CASC2Q6XLA1 102 aa4.13□□□□□ -1.75
UBR4-212ENST00000475973 PHF5AQ7RTV0 110 aaKnown RBP4.13□□□□□ -1.75
UBR4-212ENST00000475973 PLAC8Q9NZF1 115 aa4.13□□□□□ -1.75
UBR4-212ENST00000475973 HSPG2P98160 4391 aa4.12□□□□□ -1.75
UBR4-212ENST00000475973 LOC101927531A0A1B0GV80 90 aa4.12□□□□□ -1.75
UBR4-212ENST00000475973 Q5VSD8 79 aa4.12□□□□□ -1.75
UBR4-212ENST00000475973 Q8N9P0 234 aaPredicted RBP4.12□□□□□ -1.75
UBR4-212ENST00000475973 H0Y9P7 68 aa4.11□□□□□ -1.75
UBR4-212ENST00000475973 PANO1I0J062 215 aa4.11□□□□□ -1.75
UBR4-212ENST00000475973 KRTAP10-1P60331 282 aa4.11□□□□□ -1.75
UBR4-212ENST00000475973 Q5VV11 94 aa4.11□□□□□ -1.75
UBR4-212ENST00000475973 WFDC13Q8IUB5 93 aa4.11□□□□□ -1.75
UBR4-212ENST00000475973 SPACA4Q8TDM5 124 aa4.11□□□□□ -1.75
UBR4-212ENST00000475973 LINC00208Q96KT6 92 aa4.11□□□□□ -1.75
UBR4-212ENST00000475973 TP53AIP1Q9HCN2 124 aa4.11□□□□□ -1.75
UBR4-212ENST00000475973 LRP1BQ9NZR2 4599 aa4.11□□□□□ -1.75
UBR4-212ENST00000475973 MOBPQ13875 183 aa4.1□□□□□ -1.75
UBR4-212ENST00000475973 DEFB116Q30KQ4 102 aa4.1□□□□□ -1.75
UBR4-212ENST00000475973 KRTAP13-3Q3SY46 172 aa4.1□□□□□ -1.75
UBR4-212ENST00000475973 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
UBR4-212ENST00000475973 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
UBR4-212ENST00000475973 ABCA13Q86UQ4 5058 aa4.1□□□□□ -1.75
UBR4-212ENST00000475973 IGKV2-24A0A0C4DH68 120 aa4.09□□□□□ -1.75
UBR4-212ENST00000475973 BRK1Q8WUW1 75 aa4.09□□□□□ -1.75
UBR4-212ENST00000475973 LIMD2Q9BT23 127 aa4.09□□□□□ -1.75
UBR4-212ENST00000475973 PMAIP1Q13794 54 aa4.08□□□□□ -1.76
UBR4-212ENST00000475973 KRTAP9-3Q9BYQ3 159 aa4.08□□□□□ -1.76
UBR4-212ENST00000475973 DNAH5Q8TE73 4624 aa4.07□□□□□ -1.76
UBR4-212ENST00000475973 SMR3BP02814 79 aaPredicted RBP4.07□□□□□ -1.76
UBR4-212ENST00000475973 C8orf17Q9NRJ1 99 aa4.07□□□□□ -1.76
UBR4-212ENST00000475973 APOBP04114 4563 aaKnown RBP4.07□□□□□ -1.76
UBR4-212ENST00000475973 Q75L30 129 aa4.06□□□□□ -1.76
UBR4-212ENST00000475973 SRRM2Q9UQ35 2752 aaKnown RBP4.06□□□□□ -1.76
UBR4-212ENST00000475973 A0A1B0GVX0 72 aa4.05□□□□□ -1.76
UBR4-212ENST00000475973 A8MUN3 132 aa4.05□□□□□ -1.76
UBR4-212ENST00000475973 Q6ZSA8 131 aa4.05□□□□□ -1.76
UBR4-212ENST00000475973 LINC01558Q9Y6Z2 57 aa4.05□□□□□ -1.76
UBR4-212ENST00000475973 ZNF706Q9Y5V0 76 aaPredicted RBP4.04□□□□□ -1.76
UBR4-212ENST00000475973 SEC61BP60468 96 aaKnown RBP4.03□□□□□ -1.76
UBR4-212ENST00000475973 COA5Q86WW8 74 aa4.03□□□□□ -1.76
UBR4-212ENST00000475973 ZNF861PO60384 105 aa4.02□□□□□ -1.77
UBR4-212ENST00000475973 PRR4Q16378 134 aa4.02□□□□□ -1.77
UBR4-212ENST00000475973 MRPL34Q9BQ48 92 aaKnown RBP4.02□□□□□ -1.77
UBR4-212ENST00000475973 PSPHP1O15172 72 aa4.01□□□□□ -1.77
UBR4-212ENST00000475973 PSORS1C2Q9UIG4 136 aa4.01□□□□□ -1.77
UBR4-212ENST00000475973 LCA10Q71F78 164 aa4□□□□□ -1.77
UBR4-212ENST00000475973 PRR26Q8N8Z3 221 aa4□□□□□ -1.77
UBR4-212ENST00000475973 CIRBP-AS1Q8TBR5 109 aa4□□□□□ -1.77
UBR4-212ENST00000475973 A0A087X002 238 aa3.99□□□□□ -1.77
UBR4-212ENST00000475973 HRES1P13985 223 aa3.99□□□□□ -1.77
UBR4-212ENST00000475973 ATP11AUNQ6ZP68 121 aa3.99□□□□□ -1.77
UBR4-212ENST00000475973 NOTCH2NLQ7Z3S9 236 aa3.99□□□□□ -1.77
UBR4-212ENST00000475973 A8MU10 97 aa3.98□□□□□ -1.77
UBR4-212ENST00000475973 C8orf87E5RJ46 101 aa3.98□□□□□ -1.77
UBR4-212ENST00000475973 SSBP3-AS1Q7Z2R9 100 aa3.98□□□□□ -1.77
UBR4-212ENST00000475973 VPS13BQ7Z7G8 4022 aa3.98□□□□□ -1.77
UBR4-212ENST00000475973 Q5W150 140 aa3.97□□□□□ -1.77
UBR4-212ENST00000475973 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
UBR4-212ENST00000475973 FAT1Q14517 4588 aa3.96□□□□□ -1.78
UBR4-212ENST00000475973 A6NN06 94 aa3.96□□□□□ -1.78
UBR4-212ENST00000475973 DMBT1Q9UGM3 2413 aaPredicted RBP3.96□□□□□ -1.78
UBR4-212ENST00000475973 MYCBP2O75592 4640 aa3.95□□□□□ -1.78
UBR4-212ENST00000475973 IGLV9-49A0A0B4J1Y8 123 aa3.95□□□□□ -1.78
UBR4-212ENST00000475973 IGLV7-43P04211 117 aa3.95□□□□□ -1.78
UBR4-212ENST00000475973 PRR15LQ9BU68 103 aa3.95□□□□□ -1.78
UBR4-212ENST00000475973 HERC1Q15751 4861 aa3.95□□□□□ -1.78
UBR4-212ENST00000475973 IGHV6-1A0A0B4J1U7 121 aa3.94□□□□□ -1.78
UBR4-212ENST00000475973 KRTAP16-1A8MUX0 517 aa3.94□□□□□ -1.78
UBR4-212ENST00000475973 CHKB-CPT1BH3BT56 60 aa3.94□□□□□ -1.78
UBR4-212ENST00000475973 DMAC1Q96GE9 116 aa3.94□□□□□ -1.78
UBR4-212ENST00000475973 NDUFS5O43920 106 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms