RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 SPINK7P58062 85 aa6.04□□□□□ -1.44
SKA3-206ENST00000475251 ANKRD29Q8N6D5 301 aa6.04□□□□□ -1.44
SKA3-206ENST00000475251 FAM218AQ96MZ4 157 aa6.04□□□□□ -1.44
SKA3-206ENST00000475251 C8orf87E5RJ46 101 aa6.03□□□□□ -1.44
SKA3-206ENST00000475251 Q8N9P0 234 aaPredicted RBP6.03□□□□□ -1.44
SKA3-206ENST00000475251 ZCCHC13Q8WW36 166 aaKnown RBP6.03□□□□□ -1.44
SKA3-206ENST00000475251 LINC00472Q9H8W2 130 aa6.02□□□□□ -1.45
SKA3-206ENST00000475251 NEBP20929 6669 aa6.01□□□□□ -1.45
SKA3-206ENST00000475251 DEFB116Q30KQ4 102 aa6.01□□□□□ -1.45
SKA3-206ENST00000475251 A0A0B4J2C4 111 aa6□□□□□ -1.45
SKA3-206ENST00000475251 TRACP01848 142 aa6□□□□□ -1.45
SKA3-206ENST00000475251 A0A1B0GVX0 72 aa5.99□□□□□ -1.45
SKA3-206ENST00000475251 H3BQ85 93 aa5.99□□□□□ -1.45
SKA3-206ENST00000475251 KRTAP23-1A1A580 65 aa5.97□□□□□ -1.45
SKA3-206ENST00000475251 DNAL4O96015 105 aa5.97□□□□□ -1.45
SKA3-206ENST00000475251 CCKP06307 115 aa5.97□□□□□ -1.45
SKA3-206ENST00000475251 S100A2P29034 98 aa5.97□□□□□ -1.45
SKA3-206ENST00000475251 WFDC13Q8IUB5 93 aa5.97□□□□□ -1.45
SKA3-206ENST00000475251 COX8AP10176 69 aa5.96□□□□□ -1.46
SKA3-206ENST00000475251 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
SKA3-206ENST00000475251 ORMDL1Q9P0S3 153 aa5.96□□□□□ -1.46
SKA3-206ENST00000475251 DLEU1O43261 78 aa5.95□□□□□ -1.46
SKA3-206ENST00000475251 A0A1B0GV72 72 aa5.94□□□□□ -1.46
SKA3-206ENST00000475251 HIST1H2BLQ99880 126 aa5.94□□□□□ -1.46
SKA3-206ENST00000475251 J3KT08 172 aa5.93□□□□□ -1.46
SKA3-206ENST00000475251 TMEM256-PLSCR3K7ERE1 68 aa5.93□□□□□ -1.46
SKA3-206ENST00000475251 HIST3H2BBQ8N257 126 aa5.93□□□□□ -1.46
SKA3-206ENST00000475251 LYRM7Q5U5X0 104 aa5.92□□□□□ -1.46
SKA3-206ENST00000475251 PRO1854Q9UHT4 67 aa5.92□□□□□ -1.46
SKA3-206ENST00000475251 DSCR8Q96T75 97 aa5.91□□□□□ -1.46
SKA3-206ENST00000475251 HIGD1BQ9P298 99 aa5.91□□□□□ -1.46
SKA3-206ENST00000475251 NDUFB1O75438 58 aa5.9□□□□□ -1.46
SKA3-206ENST00000475251 TRIAP1O43715 76 aa5.89□□□□□ -1.47
SKA3-206ENST00000475251 KRTAP20-1Q3LI63 56 aa5.89□□□□□ -1.47
SKA3-206ENST00000475251 VPS25Q9BRG1 176 aa5.89□□□□□ -1.47
SKA3-206ENST00000475251 MUC12Q9UKN1 5478 aa5.89□□□□□ -1.47
SKA3-206ENST00000475251 UBE2V1Q13404 147 aa5.87□□□□□ -1.47
SKA3-206ENST00000475251 H1FX-AS1Q4G0G2 97 aa5.87□□□□□ -1.47
SKA3-206ENST00000475251 CEND1Q8N111 149 aa5.86□□□□□ -1.47
SKA3-206ENST00000475251 A6NN06 94 aa5.85□□□□□ -1.47
SKA3-206ENST00000475251 COX6CP09669 75 aa5.85□□□□□ -1.47
SKA3-206ENST00000475251 C14orf144Q96I85 54 aa5.85□□□□□ -1.47
SKA3-206ENST00000475251 IGKV3D-7A0A0C4DH55 119 aa5.84□□□□□ -1.47
SKA3-206ENST00000475251 S100A6P06703 90 aa5.84□□□□□ -1.47
SKA3-206ENST00000475251 PSMB2P49721 201 aa5.84□□□□□ -1.47
SKA3-206ENST00000475251 RBM3P98179 157 aaKnown RBP5.84□□□□□ -1.47
SKA3-206ENST00000475251 C8orf17Q9NRJ1 99 aa5.82□□□□□ -1.48
SKA3-206ENST00000475251 C2orf91Q6ZV80 131 aa5.81□□□□□ -1.48
SKA3-206ENST00000475251 FXYD2P54710 66 aa5.79□□□□□ -1.48
SKA3-206ENST00000475251 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
SKA3-206ENST00000475251 SPATA45Q537H7 98 aa5.79□□□□□ -1.48
SKA3-206ENST00000475251 Q6ZQT0 140 aa5.79□□□□□ -1.48
SKA3-206ENST00000475251 Q6ZVQ6 151 aa5.79□□□□□ -1.48
SKA3-206ENST00000475251 PAM16Q9Y3D7 125 aa5.79□□□□□ -1.48
SKA3-206ENST00000475251 C9JAW5 83 aa5.78□□□□□ -1.48
SKA3-206ENST00000475251 VAMP8Q9BV40 100 aa5.76□□□□□ -1.49
SKA3-206ENST00000475251 A0A1B0GW54 56 aa5.75□□□□□ -1.49
SKA3-206ENST00000475251 Q5VV11 94 aa5.75□□□□□ -1.49
SKA3-206ENST00000475251 FAM236AA0A1B0GUQ0 79 aa5.74□□□□□ -1.49
SKA3-206ENST00000475251 FAM236BA0A1B0GV22 79 aa5.74□□□□□ -1.49
SKA3-206ENST00000475251 S100A1P23297 94 aa5.74□□□□□ -1.49
SKA3-206ENST00000475251 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
SKA3-206ENST00000475251 TMEM254Q8TBM7 123 aa5.72□□□□□ -1.49
SKA3-206ENST00000475251 MRPL34Q9BQ48 92 aaKnown RBP5.72□□□□□ -1.49
SKA3-206ENST00000475251 K7ERJ3 54 aa5.71□□□□□ -1.5
SKA3-206ENST00000475251 MT1BP07438 61 aa5.71□□□□□ -1.5
SKA3-206ENST00000475251 PRR15Q8IV56 129 aa5.71□□□□□ -1.5
SKA3-206ENST00000475251 SCGB1C2P0DMR2 95 aa5.7□□□□□ -1.5
SKA3-206ENST00000475251 HSD52Q0P140 79 aa5.7□□□□□ -1.5
SKA3-206ENST00000475251 C7orf65Q6ZTY9 151 aa5.7□□□□□ -1.5
SKA3-206ENST00000475251 IGKV2D-30A0A075B6S6 120 aa5.69□□□□□ -1.5
SKA3-206ENST00000475251 NDUFS5O43920 106 aa5.69□□□□□ -1.5
SKA3-206ENST00000475251 IGKV2-30P06310 120 aa5.69□□□□□ -1.5
SKA3-206ENST00000475251 BAALC-AS2P0C853 105 aa5.68□□□□□ -1.5
SKA3-206ENST00000475251 KRTAP10-5P60370 271 aa5.68□□□□□ -1.5
SKA3-206ENST00000475251 MDN1Q9NU22 5596 aa5.67□□□□□ -1.5
SKA3-206ENST00000475251 MMP24-AS1A0A0U1RRL7 71 aa5.67□□□□□ -1.5
SKA3-206ENST00000475251 JMJD7-PLA2G4BH0Y9G9 81 aa5.67□□□□□ -1.5
SKA3-206ENST00000475251 PDE6GP18545 87 aa5.67□□□□□ -1.5
SKA3-206ENST00000475251 KRTAP19-8Q3LI54 63 aa5.67□□□□□ -1.5
SKA3-206ENST00000475251 KMT2DO14686 5537 aa5.66□□□□□ -1.5
SKA3-206ENST00000475251 SPRR2GQ9BYE4 73 aa5.66□□□□□ -1.5
SKA3-206ENST00000475251 LOC110117498A0A087WWA1 95 aa5.65□□□□□ -1.5
SKA3-206ENST00000475251 hDV103S1A0JD37 113 aa5.65□□□□□ -1.5
SKA3-206ENST00000475251 KRTAP2-3P0C7H8 128 aa5.64□□□□□ -1.51
SKA3-206ENST00000475251 C5orf47Q569G3 176 aa5.64□□□□□ -1.51
SKA3-206ENST00000475251 KRTAP2-4Q9BYR9 128 aa5.64□□□□□ -1.51
SKA3-206ENST00000475251 NREPQ16612 68 aa5.63□□□□□ -1.51
SKA3-206ENST00000475251 C4orf26Q17RF5 130 aa5.61□□□□□ -1.51
SKA3-206ENST00000475251 CSAG1Q6PB30 78 aa5.6□□□□□ -1.51
SKA3-206ENST00000475251 IMUPQ9GZP8 106 aa5.59□□□□□ -1.51
SKA3-206ENST00000475251 ATXN8Q156A1 80 aa5.58□□□□□ -1.52
SKA3-206ENST00000475251 Q5W150 140 aa5.58□□□□□ -1.52
SKA3-206ENST00000475251 S4R3F8 94 aa5.58□□□□□ -1.52
SKA3-206ENST00000475251 K7EQZ3 153 aa5.57□□□□□ -1.52
SKA3-206ENST00000475251 C14orf132Q9NPU4 83 aa5.56□□□□□ -1.52
SKA3-206ENST00000475251 KLKP1Q107X0 134 aa5.55□□□□□ -1.52
SKA3-206ENST00000475251 UQCR10Q9UDW1 63 aa5.52□□□□□ -1.53
SKA3-206ENST00000475251 HCG22E2RYF7 251 aa5.51□□□□□ -1.53
SKA3-206ENST00000475251 CXCL6P80162 114 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms