RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 TMEM256-PLSCR3K7ERE1 68 aa6.36□□□□□ -1.39
SSR1-205ENST00000475213 M0R2T5 61 aa6.36□□□□□ -1.39
SSR1-205ENST00000475213 TRBV7-4A0A0J9YYF1 115 aa6.35□□□□□ -1.39
SSR1-205ENST00000475213 DSCR10P59022 87 aa6.35□□□□□ -1.39
SSR1-205ENST00000475213 SIGMAR1Q99720 223 aa6.34□□□□□ -1.39
SSR1-205ENST00000475213 IGKV4-1P06312 121 aa6.32□□□□□ -1.4
SSR1-205ENST00000475213 UBE2V1Q13404 147 aa6.32□□□□□ -1.4
SSR1-205ENST00000475213 TRACP01848 142 aa6.31□□□□□ -1.4
SSR1-205ENST00000475213 CCKP06307 115 aa6.31□□□□□ -1.4
SSR1-205ENST00000475213 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
SSR1-205ENST00000475213 SCGB1C2P0DMR2 95 aa6.3□□□□□ -1.4
SSR1-205ENST00000475213 LINC00313P59037 77 aa6.3□□□□□ -1.4
SSR1-205ENST00000475213 DEFB116Q30KQ4 102 aa6.29□□□□□ -1.4
SSR1-205ENST00000475213 LINC00472Q9H8W2 130 aa6.29□□□□□ -1.4
SSR1-205ENST00000475213 CRCT1Q9UGL9 99 aa6.29□□□□□ -1.4
SSR1-205ENST00000475213 KRTAP16-1A8MUX0 517 aa6.28□□□□□ -1.4
SSR1-205ENST00000475213 NOTCH2NLQ7Z3S9 236 aa6.28□□□□□ -1.4
SSR1-205ENST00000475213 RBM3P98179 157 aaKnown RBP6.27□□□□□ -1.41
SSR1-205ENST00000475213 VPS25Q9BRG1 176 aa6.26□□□□□ -1.41
SSR1-205ENST00000475213 DSCR8Q96T75 97 aa6.25□□□□□ -1.41
SSR1-205ENST00000475213 FSIP2Q5CZC0 6907 aa6.24□□□□□ -1.41
SSR1-205ENST00000475213 TRBV20-1A0A075B6N2 111 aa6.24□□□□□ -1.41
SSR1-205ENST00000475213 IGHV6-1A0A0B4J1U7 121 aa6.24□□□□□ -1.41
SSR1-205ENST00000475213 BAALC-AS2P0C853 105 aa6.24□□□□□ -1.41
SSR1-205ENST00000475213 C9JAW5 83 aa6.21□□□□□ -1.42
SSR1-205ENST00000475213 A0A1B0GVX0 72 aa6.2□□□□□ -1.42
SSR1-205ENST00000475213 M0R143 59 aa6.2□□□□□ -1.42
SSR1-205ENST00000475213 NAA38Q9BRA0 125 aaKnown RBP6.2□□□□□ -1.42
SSR1-205ENST00000475213 C8orf87E5RJ46 101 aa6.19□□□□□ -1.42
SSR1-205ENST00000475213 ATXN8Q156A1 80 aa6.19□□□□□ -1.42
SSR1-205ENST00000475213 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
SSR1-205ENST00000475213 Q6ZQT0 140 aa6.17□□□□□ -1.42
SSR1-205ENST00000475213 J3KT08 172 aa6.16□□□□□ -1.42
SSR1-205ENST00000475213 HRES1P13985 223 aa6.16□□□□□ -1.42
SSR1-205ENST00000475213 FAM236DA0A1B0GTK5 79 aa6.15□□□□□ -1.42
SSR1-205ENST00000475213 JMJD7-PLA2G4BH0Y9G9 81 aa6.15□□□□□ -1.42
SSR1-205ENST00000475213 FAM236CP0DP71 79 aa6.15□□□□□ -1.42
SSR1-205ENST00000475213 MPLKIPQ8TAP9 179 aa6.15□□□□□ -1.42
SSR1-205ENST00000475213 LOC110117498A0A087WWA1 95 aa6.14□□□□□ -1.43
SSR1-205ENST00000475213 SMIM6P0DI80 62 aa6.14□□□□□ -1.43
SSR1-205ENST00000475213 KRTAP9-8Q9BYQ0 159 aa6.14□□□□□ -1.43
SSR1-205ENST00000475213 RBM12B-AS1Q9P1G2 102 aa6.14□□□□□ -1.43
SSR1-205ENST00000475213 NDUFB1O75438 58 aa6.12□□□□□ -1.43
SSR1-205ENST00000475213 A0A1B0GW54 56 aa6.11□□□□□ -1.43
SSR1-205ENST00000475213 PDE6GP18545 87 aa6.11□□□□□ -1.43
SSR1-205ENST00000475213 ZCCHC13Q8WW36 166 aaKnown RBP6.11□□□□□ -1.43
SSR1-205ENST00000475213 C14orf132Q9NPU4 83 aa6.11□□□□□ -1.43
SSR1-205ENST00000475213 LYRM7Q5U5X0 104 aa6.1□□□□□ -1.43
SSR1-205ENST00000475213 A8MWP4 228 aa6.09□□□□□ -1.43
SSR1-205ENST00000475213 Q8N9P0 234 aaPredicted RBP6.09□□□□□ -1.43
SSR1-205ENST00000475213 C8orf17Q9NRJ1 99 aa6.09□□□□□ -1.43
SSR1-205ENST00000475213 IGKV3D-7A0A0C4DH55 119 aa6.08□□□□□ -1.44
SSR1-205ENST00000475213 TSTD3H0UI37 97 aa6.08□□□□□ -1.44
SSR1-205ENST00000475213 BATFQ16520 125 aa6.08□□□□□ -1.44
SSR1-205ENST00000475213 SPINK7P58062 85 aa6.06□□□□□ -1.44
SSR1-205ENST00000475213 MT2AP02795 61 aa6.05□□□□□ -1.44
SSR1-205ENST00000475213 NREPQ16612 68 aa6.04□□□□□ -1.44
SSR1-205ENST00000475213 Q6ZVQ6 151 aa6.04□□□□□ -1.44
SSR1-205ENST00000475213 PRR15Q8IV56 129 aa6.04□□□□□ -1.44
SSR1-205ENST00000475213 MTURNQ8N3F0 131 aa6.04□□□□□ -1.44
SSR1-205ENST00000475213 H3BT86 120 aa6.01□□□□□ -1.45
SSR1-205ENST00000475213 TAX1BP3O14907 124 aa6.01□□□□□ -1.45
SSR1-205ENST00000475213 MT1FP04733 61 aa6.01□□□□□ -1.45
SSR1-205ENST00000475213 MMP24-AS1A0A0U1RRL7 71 aa6□□□□□ -1.45
SSR1-205ENST00000475213 LOC105371267A0A1B0GV96 52 aa6□□□□□ -1.45
SSR1-205ENST00000475213 USH2AO75445 5202 aa6□□□□□ -1.45
SSR1-205ENST00000475213 A0A1W2PPM0 123 aa5.99□□□□□ -1.45
SSR1-205ENST00000475213 TMEM254Q8TBM7 123 aa5.98□□□□□ -1.45
SSR1-205ENST00000475213 MRPL34Q9BQ48 92 aaKnown RBP5.98□□□□□ -1.45
SSR1-205ENST00000475213 K7EQZ3 153 aa5.97□□□□□ -1.45
SSR1-205ENST00000475213 KRTAP10-10P60014 251 aa5.97□□□□□ -1.45
SSR1-205ENST00000475213 WFDC13Q8IUB5 93 aa5.97□□□□□ -1.45
SSR1-205ENST00000475213 hDV103S1A0JD37 113 aa5.96□□□□□ -1.46
SSR1-205ENST00000475213 SSPOA2VEC9 5147 aa5.95□□□□□ -1.46
SSR1-205ENST00000475213 BPY2O14599 106 aa5.93□□□□□ -1.46
SSR1-205ENST00000475213 NDUFS5O43920 106 aa5.92□□□□□ -1.46
SSR1-205ENST00000475213 SPCS1Q9Y6A9 102 aa5.91□□□□□ -1.46
SSR1-205ENST00000475213 Q5W150 140 aa5.87□□□□□ -1.47
SSR1-205ENST00000475213 Q8N9L7 120 aa5.87□□□□□ -1.47
SSR1-205ENST00000475213 IGKV2D-30A0A075B6S6 120 aa5.85□□□□□ -1.47
SSR1-205ENST00000475213 IGKV2-30P06310 120 aa5.85□□□□□ -1.47
SSR1-205ENST00000475213 H1FX-AS1Q4G0G2 97 aa5.85□□□□□ -1.47
SSR1-205ENST00000475213 CASC2Q6XLA1 102 aa5.85□□□□□ -1.47
SSR1-205ENST00000475213 C7orf65Q6ZTY9 151 aa5.84□□□□□ -1.47
SSR1-205ENST00000475213 HCG22E2RYF7 251 aa5.83□□□□□ -1.48
SSR1-205ENST00000475213 COL5A1-AS1Q5SY13 56 aa5.83□□□□□ -1.48
SSR1-205ENST00000475213 PRO0461Q9UI25 63 aa5.83□□□□□ -1.48
SSR1-205ENST00000475213 LINC00846Q9NV44 126 aa5.81□□□□□ -1.48
SSR1-205ENST00000475213 FCGBPQ9Y6R7 5405 aaPredicted RBP5.81□□□□□ -1.48
SSR1-205ENST00000475213 K7EP34 96 aa5.8□□□□□ -1.48
SSR1-205ENST00000475213 UBL5Q9BZL1 73 aa5.8□□□□□ -1.48
SSR1-205ENST00000475213 CXCL6P80162 114 aa5.78□□□□□ -1.48
SSR1-205ENST00000475213 C4orf26Q17RF5 130 aa5.76□□□□□ -1.49
SSR1-205ENST00000475213 SVIPQ8NHG7 77 aa5.74□□□□□ -1.49
SSR1-205ENST00000475213 KRTAP19-6Q3LI70 58 aa5.73□□□□□ -1.49
SSR1-205ENST00000475213 GTF2H5Q6ZYL4 71 aa5.71□□□□□ -1.5
SSR1-205ENST00000475213 F8W1H4 67 aa5.69□□□□□ -1.5
SSR1-205ENST00000475213 ETDBQ3ZM63 59 aa5.68□□□□□ -1.5
SSR1-205ENST00000475213 C5orf47Q569G3 176 aa5.66□□□□□ -1.5
SSR1-205ENST00000475213 TP53AIP1Q9HCN2 124 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms