RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 C9orf153Q5TBE3 101 aa3.86□□□□□ -1.79
ATG4A-207ENST00000474825 Q5XG85 94 aa3.86□□□□□ -1.79
ATG4A-207ENST00000474825 ANAPC13Q9BS18 74 aa3.86□□□□□ -1.79
ATG4A-207ENST00000474825 UBL5Q9BZL1 73 aa3.86□□□□□ -1.79
ATG4A-207ENST00000474825 ASB16-AS1Q495Z4 193 aa3.85□□□□□ -1.79
ATG4A-207ENST00000474825 ATP5EP2Q5VTU8 51 aa3.85□□□□□ -1.79
ATG4A-207ENST00000474825 IMUPQ9GZP8 106 aa3.85□□□□□ -1.79
ATG4A-207ENST00000474825 A0A087WSZ3 146 aa3.84□□□□□ -1.79
ATG4A-207ENST00000474825 MT-ATP8P03928 68 aa3.84□□□□□ -1.79
ATG4A-207ENST00000474825 CXCL6P80162 114 aa3.84□□□□□ -1.79
ATG4A-207ENST00000474825 NREPQ16612 68 aa3.84□□□□□ -1.79
ATG4A-207ENST00000474825 LINC00472Q9H8W2 130 aa3.84□□□□□ -1.79
ATG4A-207ENST00000474825 RPS29P62273 56 aaKnown RBP3.83□□□□□ -1.8
ATG4A-207ENST00000474825 PCLOQ9Y6V0 5065 aa3.82□□□□□ -1.8
ATG4A-207ENST00000474825 SPINK1P00995 79 aa3.82□□□□□ -1.8
ATG4A-207ENST00000474825 KRTAP10-8P60410 259 aa3.82□□□□□ -1.8
ATG4A-207ENST00000474825 SPAG11AQ6PDA7 123 aa3.82□□□□□ -1.8
ATG4A-207ENST00000474825 PRR26Q8N8Z3 221 aa3.82□□□□□ -1.8
ATG4A-207ENST00000474825 TYMSOSQ8TAI1 123 aa3.82□□□□□ -1.8
ATG4A-207ENST00000474825 Q96NJ1 140 aa3.82□□□□□ -1.8
ATG4A-207ENST00000474825 DSCR10P59022 87 aa3.81□□□□□ -1.8
ATG4A-207ENST00000474825 FLG2Q5D862 2391 aaPredicted RBP3.81□□□□□ -1.8
ATG4A-207ENST00000474825 J3KT08 172 aa3.8□□□□□ -1.8
ATG4A-207ENST00000474825 BPY2O14599 106 aa3.8□□□□□ -1.8
ATG4A-207ENST00000474825 SMIM20Q8N5G0 67 aa3.8□□□□□ -1.8
ATG4A-207ENST00000474825 IGKV3D-7A0A0C4DH55 119 aa3.79□□□□□ -1.8
ATG4A-207ENST00000474825 KRTAP29-1A8MX34 341 aaPredicted RBP3.79□□□□□ -1.8
ATG4A-207ENST00000474825 DMBT1Q9UGM3 2413 aaPredicted RBP3.78□□□□□ -1.8
ATG4A-207ENST00000474825 OXTP01178 125 aa3.78□□□□□ -1.8
ATG4A-207ENST00000474825 IGKV4-1P06312 121 aa3.78□□□□□ -1.8
ATG4A-207ENST00000474825 HIST1H4AP62805 103 aaKnown RBP3.78□□□□□ -1.8
ATG4A-207ENST00000474825 HRCT1Q6UXD1 115 aa3.78□□□□□ -1.8
ATG4A-207ENST00000474825 LINC00304Q8N9R0 145 aa3.78□□□□□ -1.8
ATG4A-207ENST00000474825 LIMD2Q9BT23 127 aa3.78□□□□□ -1.8
ATG4A-207ENST00000474825 A8MWP4 228 aa3.77□□□□□ -1.81
ATG4A-207ENST00000474825 MT1HL1P0DM35 61 aa3.77□□□□□ -1.81
ATG4A-207ENST00000474825 C1orf195Q5TG92 126 aa3.77□□□□□ -1.81
ATG4A-207ENST00000474825 CCDC179H3BU77 68 aa3.76□□□□□ -1.81
ATG4A-207ENST00000474825 PRR15Q8IV56 129 aa3.76□□□□□ -1.81
ATG4A-207ENST00000474825 K7EQZ3 153 aa3.75□□□□□ -1.81
ATG4A-207ENST00000474825 DEFB116Q30KQ4 102 aa3.75□□□□□ -1.81
ATG4A-207ENST00000474825 A0A087WVE0 104 aa3.74□□□□□ -1.81
ATG4A-207ENST00000474825 C5orf47Q569G3 176 aa3.74□□□□□ -1.81
ATG4A-207ENST00000474825 Q8N9L7 120 aa3.74□□□□□ -1.81
ATG4A-207ENST00000474825 A0A1B0GVX0 72 aa3.73□□□□□ -1.81
ATG4A-207ENST00000474825 FAM236AA0A1B0GUQ0 79 aa3.72□□□□□ -1.81
ATG4A-207ENST00000474825 FAM236BA0A1B0GV22 79 aa3.72□□□□□ -1.81
ATG4A-207ENST00000474825 NDUFB1O75438 58 aa3.72□□□□□ -1.81
ATG4A-207ENST00000474825 MMP24-AS1A0A0U1RRL7 71 aa3.71□□□□□ -1.82
ATG4A-207ENST00000474825 HCG22E2RYF7 251 aa3.7□□□□□ -1.82
ATG4A-207ENST00000474825 C8orf87E5RJ46 101 aa3.7□□□□□ -1.82
ATG4A-207ENST00000474825 C8orf17Q9NRJ1 99 aa3.7□□□□□ -1.82
ATG4A-207ENST00000474825 ATOX1O00244 68 aa3.69□□□□□ -1.82
ATG4A-207ENST00000474825 KRTAP15-1Q3LI76 137 aa3.69□□□□□ -1.82
ATG4A-207ENST00000474825 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
ATG4A-207ENST00000474825 FP248Q71RG6 208 aaPredicted RBP3.68□□□□□ -1.82
ATG4A-207ENST00000474825 NOTCH2NLQ7Z3S9 236 aa3.68□□□□□ -1.82
ATG4A-207ENST00000474825 OCR1Q9BZK8 76 aa3.68□□□□□ -1.82
ATG4A-207ENST00000474825 HERC1Q15751 4861 aa3.67□□□□□ -1.82
ATG4A-207ENST00000474825 IGHV6-1A0A0B4J1U7 121 aa3.67□□□□□ -1.82
ATG4A-207ENST00000474825 hDV103S1A0JD37 113 aa3.67□□□□□ -1.82
ATG4A-207ENST00000474825 KRTAP16-1A8MUX0 517 aa3.67□□□□□ -1.82
ATG4A-207ENST00000474825 UQCRQO14949 82 aa3.67□□□□□ -1.82
ATG4A-207ENST00000474825 CASC2Q6XLA1 102 aa3.67□□□□□ -1.82
ATG4A-207ENST00000474825 TMEM254Q8TBM7 123 aa3.67□□□□□ -1.82
ATG4A-207ENST00000474825 HMCN2Q8NDA2 5059 aa3.67□□□□□ -1.82
ATG4A-207ENST00000474825 TRAV7A0A075B6U4 112 aa3.66□□□□□ -1.82
ATG4A-207ENST00000474825 LINC00313P59037 77 aa3.66□□□□□ -1.82
ATG4A-207ENST00000474825 Q8N9P0 234 aaPredicted RBP3.66□□□□□ -1.82
ATG4A-207ENST00000474825 MRPL34Q9BQ48 92 aaKnown RBP3.66□□□□□ -1.82
ATG4A-207ENST00000474825 RPS28P62857 69 aaKnown RBP3.65□□□□□ -1.83
ATG4A-207ENST00000474825 SERP2Q8N6R1 65 aa3.65□□□□□ -1.83
ATG4A-207ENST00000474825 WFDC13Q8IUB5 93 aa3.64□□□□□ -1.83
ATG4A-207ENST00000474825 COX7CP15954 63 aa3.63□□□□□ -1.83
ATG4A-207ENST00000474825 RETNLBQ9BQ08 111 aa3.63□□□□□ -1.83
ATG4A-207ENST00000474825 TP53AIP1Q9HCN2 124 aa3.63□□□□□ -1.83
ATG4A-207ENST00000474825 TMEM258P61165 79 aa3.62□□□□□ -1.83
ATG4A-207ENST00000474825 KRTAP13-3Q3SY46 172 aa3.62□□□□□ -1.83
ATG4A-207ENST00000474825 C20orf166-AS1Q96NR2 134 aa3.62□□□□□ -1.83
ATG4A-207ENST00000474825 A8MUU9 505 aa3.61□□□□□ -1.83
ATG4A-207ENST00000474825 LRP2P98164 4655 aa3.61□□□□□ -1.83
ATG4A-207ENST00000474825 MUC17Q685J3 4493 aa3.6□□□□□ -1.83
ATG4A-207ENST00000474825 LPAP08519 4548 aa3.6□□□□□ -1.83
ATG4A-207ENST00000474825 IGLV7-46A0A075B6I9 117 aa3.6□□□□□ -1.83
ATG4A-207ENST00000474825 TPRXLQ17RH7 258 aa3.59□□□□□ -1.83
ATG4A-207ENST00000474825 Q75L30 129 aa3.59□□□□□ -1.83
ATG4A-207ENST00000474825 H3BPC8 53 aa3.58□□□□□ -1.84
ATG4A-207ENST00000474825 KLKP1Q107X0 134 aa3.58□□□□□ -1.84
ATG4A-207ENST00000474825 ZCCHC13Q8WW36 166 aaKnown RBP3.58□□□□□ -1.84
ATG4A-207ENST00000474825 A0A0U1RQV1 116 aa3.57□□□□□ -1.84
ATG4A-207ENST00000474825 Q5W150 140 aa3.57□□□□□ -1.84
ATG4A-207ENST00000474825 TRAV22A0A0B4J277 110 aa3.56□□□□□ -1.84
ATG4A-207ENST00000474825 C9orf92A6NGG3 77 aa3.56□□□□□ -1.84
ATG4A-207ENST00000474825 H0Y9P7 68 aa3.55□□□□□ -1.84
ATG4A-207ENST00000474825 NDUFS5O43920 106 aa3.55□□□□□ -1.84
ATG4A-207ENST00000474825 MP68P56378 58 aa3.55□□□□□ -1.84
ATG4A-207ENST00000474825 PRR4Q16378 134 aa3.55□□□□□ -1.84
ATG4A-207ENST00000474825 C20orf197Q8N268 126 aa3.55□□□□□ -1.84
ATG4A-207ENST00000474825 RPL37P61927 97 aaKnown RBP3.54□□□□□ -1.84
ATG4A-207ENST00000474825 NDUFC1O43677 76 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms