RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 PKD1P98161 4303 aa12.99□□□□□ -0.33
SH3D21-202ENST00000474766 ATP11AUNQ6ZP68 121 aa12.99□□□□□ -0.33
SH3D21-202ENST00000474766 A8MU10 97 aa12.98□□□□□ -0.33
SH3D21-202ENST00000474766 C8orf87E5RJ46 101 aa12.97□□□□□ -0.33
SH3D21-202ENST00000474766 A0A1B0GVY2 172 aa12.96□□□□□ -0.33
SH3D21-202ENST00000474766 COA5Q86WW8 74 aa12.96□□□□□ -0.33
SH3D21-202ENST00000474766 DNAH11Q96DT5 4516 aa12.94□□□□□ -0.34
SH3D21-202ENST00000474766 PKHD1P08F94 4074 aa12.94□□□□□ -0.34
SH3D21-202ENST00000474766 MMP24-AS1A0A0U1RRL7 71 aa12.92□□□□□ -0.34
SH3D21-202ENST00000474766 PANO1I0J062 215 aa12.9□□□□□ -0.34
SH3D21-202ENST00000474766 LCA10Q71F78 164 aa12.9□□□□□ -0.34
SH3D21-202ENST00000474766 SRRM2Q9UQ35 2752 aaKnown RBP12.9□□□□□ -0.34
SH3D21-202ENST00000474766 TP53AIP1Q9HCN2 124 aa12.89□□□□□ -0.35
SH3D21-202ENST00000474766 A6NED7 52 aa12.88□□□□□ -0.35
SH3D21-202ENST00000474766 CDC42SE1Q9NRR8 79 aa12.87□□□□□ -0.35
SH3D21-202ENST00000474766 A0A087WTM6 91 aa12.86□□□□□ -0.35
SH3D21-202ENST00000474766 ASB16-AS1Q495Z4 193 aa12.86□□□□□ -0.35
SH3D21-202ENST00000474766 KRTAP13-1Q8IUC0 172 aa12.86□□□□□ -0.35
SH3D21-202ENST00000474766 LINC01558Q9Y6Z2 57 aa12.86□□□□□ -0.35
SH3D21-202ENST00000474766 BIRC6Q9NR09 4857 aa12.86□□□□□ -0.35
SH3D21-202ENST00000474766 A6NN06 94 aa12.84□□□□□ -0.35
SH3D21-202ENST00000474766 C7orf65Q6ZTY9 151 aa12.84□□□□□ -0.35
SH3D21-202ENST00000474766 PLAC8Q9NZF1 115 aa12.84□□□□□ -0.35
SH3D21-202ENST00000474766 SPACA4Q8TDM5 124 aa12.84□□□□□ -0.35
SH3D21-202ENST00000474766 SPTSSBQ8NFR3 76 aa12.83□□□□□ -0.36
SH3D21-202ENST00000474766 KRTAP10-2P60368 255 aa12.82□□□□□ -0.36
SH3D21-202ENST00000474766 MOBPQ13875 183 aa12.82□□□□□ -0.36
SH3D21-202ENST00000474766 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.81□□□□□ -0.36
SH3D21-202ENST00000474766 DYNC1H1Q14204 4646 aaKnown RBP12.81□□□□□ -0.36
SH3D21-202ENST00000474766 DNAH5Q8TE73 4624 aa12.79□□□□□ -0.36
SH3D21-202ENST00000474766 PCOTHQ58A44 107 aa12.74□□□□□ -0.37
SH3D21-202ENST00000474766 Q96NJ1 140 aa12.72□□□□□ -0.37
SH3D21-202ENST00000474766 LRP1BQ9NZR2 4599 aa12.72□□□□□ -0.37
SH3D21-202ENST00000474766 C8orf17Q9NRJ1 99 aa12.71□□□□□ -0.37
SH3D21-202ENST00000474766 PRR26Q8N8Z3 221 aa12.7□□□□□ -0.38
SH3D21-202ENST00000474766 SPAG11AQ6PDA7 123 aa12.69□□□□□ -0.38
SH3D21-202ENST00000474766 KIAA1109Q2LD37 5005 aa12.67□□□□□ -0.38
SH3D21-202ENST00000474766 LINC00483Q53H64 154 aa12.67□□□□□ -0.38
SH3D21-202ENST00000474766 HRES1P13985 223 aa12.66□□□□□ -0.38
SH3D21-202ENST00000474766 IGLV5-52A0A0A0MRZ9 124 aa12.65□□□□□ -0.38
SH3D21-202ENST00000474766 A0A1B0GVX0 72 aa12.62□□□□□ -0.39
SH3D21-202ENST00000474766 PSORS1C2Q9UIG4 136 aa12.62□□□□□ -0.39
SH3D21-202ENST00000474766 KRTAP10-1P60331 282 aa12.61□□□□□ -0.39
SH3D21-202ENST00000474766 APOBP04114 4563 aaKnown RBP12.6□□□□□ -0.39
SH3D21-202ENST00000474766 MRPL34Q9BQ48 92 aaKnown RBP12.59□□□□□ -0.39
SH3D21-202ENST00000474766 ZNF706Q9Y5V0 76 aaPredicted RBP12.59□□□□□ -0.39
SH3D21-202ENST00000474766 IGLV9-49A0A0B4J1Y8 123 aa12.59□□□□□ -0.39
SH3D21-202ENST00000474766 SPINK7P58062 85 aa12.57□□□□□ -0.4
SH3D21-202ENST00000474766 DNAH8Q96JB1 4490 aa12.57□□□□□ -0.4
SH3D21-202ENST00000474766 RYR1P21817 5038 aa12.56□□□□□ -0.4
SH3D21-202ENST00000474766 ZNF861PO60384 105 aa12.55□□□□□ -0.4
SH3D21-202ENST00000474766 CDK2AP2O75956 126 aa12.55□□□□□ -0.4
SH3D21-202ENST00000474766 HSPG2P98160 4391 aa12.54□□□□□ -0.4
SH3D21-202ENST00000474766 IGHV6-1A0A0B4J1U7 121 aa12.54□□□□□ -0.4
SH3D21-202ENST00000474766 HERC2O95714 4834 aa12.52□□□□□ -0.41
SH3D21-202ENST00000474766 LINC01554Q52M75 96 aa12.46□□□□□ -0.41
SH3D21-202ENST00000474766 Q6ZSA8 131 aa12.46□□□□□ -0.41
SH3D21-202ENST00000474766 KRTAP17-1Q9BYP8 105 aa12.46□□□□□ -0.41
SH3D21-202ENST00000474766 ANAPC11Q9NYG5 84 aa12.44□□□□□ -0.42
SH3D21-202ENST00000474766 ACYP2P14621 99 aa12.42□□□□□ -0.42
SH3D21-202ENST00000474766 IGLV7-43P04211 117 aa12.42□□□□□ -0.42
SH3D21-202ENST00000474766 KRTAP13-3Q3SY46 172 aa12.42□□□□□ -0.42
SH3D21-202ENST00000474766 A0A087X002 238 aa12.38□□□□□ -0.43
SH3D21-202ENST00000474766 NOTCH2NLQ7Z3S9 236 aa12.38□□□□□ -0.43
SH3D21-202ENST00000474766 LINC00313P59037 77 aa12.36□□□□□ -0.43
SH3D21-202ENST00000474766 CIRBP-AS1Q8TBR5 109 aa12.36□□□□□ -0.43
SH3D21-202ENST00000474766 FAT1Q14517 4588 aa12.34□□□□□ -0.43
SH3D21-202ENST00000474766 Q5W150 140 aa12.34□□□□□ -0.43
SH3D21-202ENST00000474766 SMR3BP02814 79 aaPredicted RBP12.33□□□□□ -0.44
SH3D21-202ENST00000474766 DMAC1Q96GE9 116 aa12.32□□□□□ -0.44
SH3D21-202ENST00000474766 KRTAP4-5Q9BYR2 181 aa12.32□□□□□ -0.44
SH3D21-202ENST00000474766 Q8N1X5 172 aa12.32□□□□□ -0.44
SH3D21-202ENST00000474766 PLA2G1BP04054 148 aaKnown RBP12.27□□□□□ -0.44
SH3D21-202ENST00000474766 SSBP3-AS1Q7Z2R9 100 aa12.25□□□□□ -0.45
SH3D21-202ENST00000474766 SPATA8Q6RVD6 105 aa12.24□□□□□ -0.45
SH3D21-202ENST00000474766 ABCA13Q86UQ4 5058 aa12.24□□□□□ -0.45
SH3D21-202ENST00000474766 Q5VSD8 79 aa12.23□□□□□ -0.45
SH3D21-202ENST00000474766 A0A1B0GU69 56 aa12.21□□□□□ -0.45
SH3D21-202ENST00000474766 PCLOQ9Y6V0 5065 aa12.21□□□□□ -0.46
SH3D21-202ENST00000474766 VPS13BQ7Z7G8 4022 aa12.2□□□□□ -0.46
SH3D21-202ENST00000474766 FAM229AH3BQW9 127 aa12.17□□□□□ -0.46
SH3D21-202ENST00000474766 SPINK6Q6UWN8 80 aa12.16□□□□□ -0.46
SH3D21-202ENST00000474766 PRAC1Q96KF2 57 aa12.15□□□□□ -0.47
SH3D21-202ENST00000474766 KRTAP10-4P60372 401 aaPredicted RBP12.13□□□□□ -0.47
SH3D21-202ENST00000474766 IGKV2-30P06310 120 aa12.11□□□□□ -0.47
SH3D21-202ENST00000474766 KRTAP13-2Q52LG2 175 aa12.1□□□□□ -0.47
SH3D21-202ENST00000474766 UQCR11O14957 56 aa12.1□□□□□ -0.47
SH3D21-202ENST00000474766 MIR22HGQ0VDD5 57 aa12.08□□□□□ -0.48
SH3D21-202ENST00000474766 ADM2Q7Z4H4 148 aa12.04□□□□□ -0.48
SH3D21-202ENST00000474766 KRTAP1-4P0C5Y4 121 aa12.02□□□□□ -0.49
SH3D21-202ENST00000474766 FLG2Q5D862 2391 aaPredicted RBP12.02□□□□□ -0.49
SH3D21-202ENST00000474766 PKHD1L1Q86WI1 4243 aa11.99□□□□□ -0.49
SH3D21-202ENST00000474766 MYCBP2O75592 4640 aa11.99□□□□□ -0.49
SH3D21-202ENST00000474766 RETNLBQ9BQ08 111 aa11.97□□□□□ -0.49
SH3D21-202ENST00000474766 KRTAP16-1A8MUX0 517 aa11.9□□□□□ -0.5
SH3D21-202ENST00000474766 LRP1Q07954 4544 aaKnown RBP11.88□□□□□ -0.51
SH3D21-202ENST00000474766 IGKV2D-30A0A075B6S6 120 aa11.86□□□□□ -0.51
SH3D21-202ENST00000474766 FAT3Q8TDW7 4589 aa11.84□□□□□ -0.51
SH3D21-202ENST00000474766 TYMSOSQ8TAI1 123 aa11.81□□□□□ -0.52
SH3D21-202ENST00000474766 SPINK1P00995 79 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms