RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 HRCT1Q6UXD1 115 aa11.16□□□□□ -0.62
APP-215ENST00000474136 LIMD2Q9BT23 127 aa11.16□□□□□ -0.62
APP-215ENST00000474136 FAM240AA0A1B0GVK7 77 aa11.14□□□□□ -0.63
APP-215ENST00000474136 Q5XG85 94 aa11.14□□□□□ -0.63
APP-215ENST00000474136 A0A087WSZ3 146 aa11.12□□□□□ -0.63
APP-215ENST00000474136 K7ERU9 68 aa11.1□□□□□ -0.63
APP-215ENST00000474136 LORP23490 312 aaPredicted RBP11.09□□□□□ -0.63
APP-215ENST00000474136 KRTAP10-6P60371 365 aaPredicted RBP11.07□□□□□ -0.64
APP-215ENST00000474136 UBL5Q9BZL1 73 aa11.07□□□□□ -0.64
APP-215ENST00000474136 NREPQ16612 68 aa11.06□□□□□ -0.64
APP-215ENST00000474136 LINC00846Q9NV44 126 aa11.03□□□□□ -0.64
APP-215ENST00000474136 PCOTHQ58A44 107 aa11.02□□□□□ -0.65
APP-215ENST00000474136 Q6ZVQ6 151 aa10.98□□□□□ -0.65
APP-215ENST00000474136 J3KT08 172 aa10.97□□□□□ -0.65
APP-215ENST00000474136 LINC00472Q9H8W2 130 aa10.96□□□□□ -0.65
APP-215ENST00000474136 C1orf195Q5TG92 126 aa10.94□□□□□ -0.66
APP-215ENST00000474136 KRTAP9-7A8MTY7 169 aa10.93□□□□□ -0.66
APP-215ENST00000474136 M0R2T5 61 aa10.92□□□□□ -0.66
APP-215ENST00000474136 BPY2O14599 106 aa10.91□□□□□ -0.66
APP-215ENST00000474136 Q96NJ1 140 aa10.91□□□□□ -0.66
APP-215ENST00000474136 SIGMAR1Q99720 223 aa10.91□□□□□ -0.66
APP-215ENST00000474136 FLGP20930 4061 aaPredicted RBP10.91□□□□□ -0.66
APP-215ENST00000474136 LINC00643Q86TS7 51 aa10.9□□□□□ -0.66
APP-215ENST00000474136 IGKV4-1P06312 121 aa10.89□□□□□ -0.67
APP-215ENST00000474136 ATP5EP2Q5VTU8 51 aa10.89□□□□□ -0.67
APP-215ENST00000474136 C9orf92A6NGG3 77 aa10.88□□□□□ -0.67
APP-215ENST00000474136 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.88□□□□□ -0.67
APP-215ENST00000474136 CXCL6P80162 114 aa10.87□□□□□ -0.67
APP-215ENST00000474136 NDUFB1O75438 58 aa10.86□□□□□ -0.67
APP-215ENST00000474136 DEFB116Q30KQ4 102 aa10.84□□□□□ -0.67
APP-215ENST00000474136 A8MWP4 228 aa10.82□□□□□ -0.68
APP-215ENST00000474136 DSCR10P59022 87 aa10.79□□□□□ -0.68
APP-215ENST00000474136 COX6B2Q6YFQ2 88 aa10.78□□□□□ -0.68
APP-215ENST00000474136 A0A1B0GVX0 72 aa10.76□□□□□ -0.69
APP-215ENST00000474136 PRR15Q8IV56 129 aa10.76□□□□□ -0.69
APP-215ENST00000474136 IGKV3D-7A0A0C4DH55 119 aa10.74□□□□□ -0.69
APP-215ENST00000474136 C8orf87E5RJ46 101 aa10.73□□□□□ -0.69
APP-215ENST00000474136 K7EQZ3 153 aa10.72□□□□□ -0.69
APP-215ENST00000474136 IGHV6-1A0A0B4J1U7 121 aa10.71□□□□□ -0.69
APP-215ENST00000474136 SSPOA2VEC9 5147 aa10.71□□□□□ -0.7
APP-215ENST00000474136 LINC00313P59037 77 aa10.7□□□□□ -0.7
APP-215ENST00000474136 IMUPQ9GZP8 106 aa10.7□□□□□ -0.7
APP-215ENST00000474136 HIST1H4AP62805 103 aaKnown RBP10.67□□□□□ -0.7
APP-215ENST00000474136 Q8N9L7 120 aa10.66□□□□□ -0.7
APP-215ENST00000474136 USH2AO75445 5202 aa10.66□□□□□ -0.7
APP-215ENST00000474136 C8orf17Q9NRJ1 99 aa10.65□□□□□ -0.7
APP-215ENST00000474136 RPL37P61927 97 aaKnown RBP10.64□□□□□ -0.71
APP-215ENST00000474136 MT-ATP8P03928 68 aa10.62□□□□□ -0.71
APP-215ENST00000474136 HCG22E2RYF7 251 aa10.6□□□□□ -0.71
APP-215ENST00000474136 MMP24-AS1A0A0U1RRL7 71 aa10.58□□□□□ -0.71
APP-215ENST00000474136 hDV103S1A0JD37 113 aa10.58□□□□□ -0.71
APP-215ENST00000474136 CASC2Q6XLA1 102 aa10.58□□□□□ -0.72
APP-215ENST00000474136 NOTCH2NLQ7Z3S9 236 aa10.57□□□□□ -0.72
APP-215ENST00000474136 TMEM254Q8TBM7 123 aa10.57□□□□□ -0.72
APP-215ENST00000474136 FCGBPQ9Y6R7 5405 aaPredicted RBP10.55□□□□□ -0.72
APP-215ENST00000474136 MRPL34Q9BQ48 92 aaKnown RBP10.54□□□□□ -0.72
APP-215ENST00000474136 WFDC13Q8IUB5 93 aa10.53□□□□□ -0.72
APP-215ENST00000474136 A0A087WVE0 104 aa10.52□□□□□ -0.73
APP-215ENST00000474136 KRTAP16-1A8MUX0 517 aa10.51□□□□□ -0.73
APP-215ENST00000474136 KRTAP9-8Q9BYQ0 159 aa10.5□□□□□ -0.73
APP-215ENST00000474136 Q8N9P0 234 aaPredicted RBP10.48□□□□□ -0.73
APP-215ENST00000474136 C20orf166-AS1Q96NR2 134 aa10.48□□□□□ -0.73
APP-215ENST00000474136 Q75L30 129 aa10.46□□□□□ -0.73
APP-215ENST00000474136 A8MUU9 505 aa10.45□□□□□ -0.74
APP-215ENST00000474136 SCGB1A1P11684 91 aa10.44□□□□□ -0.74
APP-215ENST00000474136 NDUFS5O43920 106 aa10.43□□□□□ -0.74
APP-215ENST00000474136 TP53AIP1Q9HCN2 124 aa10.43□□□□□ -0.74
APP-215ENST00000474136 FAM236AA0A1B0GUQ0 79 aa10.39□□□□□ -0.75
APP-215ENST00000474136 FAM236BA0A1B0GV22 79 aa10.39□□□□□ -0.75
APP-215ENST00000474136 KRTAP19-1Q8IUB9 90 aa10.39□□□□□ -0.75
APP-215ENST00000474136 MACF1Q9UPN3 7388 aaKnown RBP10.38□□□□□ -0.75
APP-215ENST00000474136 ATP11AUNQ6ZP68 121 aa10.37□□□□□ -0.75
APP-215ENST00000474136 SMIM20Q8N5G0 67 aa10.37□□□□□ -0.75
APP-215ENST00000474136 SYNE2Q8WXH0 6885 aaKnown RBP10.37□□□□□ -0.75
APP-215ENST00000474136 ATOX1O00244 68 aa10.33□□□□□ -0.76
APP-215ENST00000474136 UQCRQO14949 82 aa10.33□□□□□ -0.76
APP-215ENST00000474136 LCE2BO14633 110 aa10.31□□□□□ -0.76
APP-215ENST00000474136 ZCCHC13Q8WW36 166 aaKnown RBP10.31□□□□□ -0.76
APP-215ENST00000474136 MT2AP02795 61 aa10.29□□□□□ -0.76
APP-215ENST00000474136 OCR1Q9BZK8 76 aa10.29□□□□□ -0.76
APP-215ENST00000474136 TRAV7A0A075B6U4 112 aa10.25□□□□□ -0.77
APP-215ENST00000474136 TRAV22A0A0B4J277 110 aa10.23□□□□□ -0.77
APP-215ENST00000474136 C5orf47Q569G3 176 aa10.23□□□□□ -0.77
APP-215ENST00000474136 MT1FP04733 61 aa10.22□□□□□ -0.77
APP-215ENST00000474136 MP68P56378 58 aa10.19□□□□□ -0.78
APP-215ENST00000474136 Q5W150 140 aa10.19□□□□□ -0.78
APP-215ENST00000474136 KRTAP9-3Q9BYQ3 159 aa10.19□□□□□ -0.78
APP-215ENST00000474136 SERP2Q8N6R1 65 aa10.18□□□□□ -0.78
APP-215ENST00000474136 H0Y9P7 68 aa10.16□□□□□ -0.78
APP-215ENST00000474136 H3BPC8 53 aa10.15□□□□□ -0.78
APP-215ENST00000474136 LOC101927531A0A1B0GV80 90 aa10.11□□□□□ -0.79
APP-215ENST00000474136 KRTAP10-10P60014 251 aa10.11□□□□□ -0.79
APP-215ENST00000474136 ANAPC13Q9BS18 74 aa10.11□□□□□ -0.79
APP-215ENST00000474136 C7orf65Q6ZTY9 151 aa10.08□□□□□ -0.8
APP-215ENST00000474136 LINC00208Q96KT6 92 aa10.07□□□□□ -0.8
APP-215ENST00000474136 IGKV2-30P06310 120 aa10.07□□□□□ -0.8
APP-215ENST00000474136 COX7CP15954 63 aa10.07□□□□□ -0.8
APP-215ENST00000474136 SPINK7P58062 85 aa10.07□□□□□ -0.8
APP-215ENST00000474136 C1orf64Q8NEQ6 169 aa10.07□□□□□ -0.8
APP-215ENST00000474136 IGKV2D-30A0A075B6S6 120 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms