RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 RETNLBQ9BQ08 111 aa5.85□□□□□ -1.47
PRPF38A-202ENST00000474048 IMUPQ9GZP8 106 aa5.85□□□□□ -1.47
PRPF38A-202ENST00000474048 PKHD1L1Q86WI1 4243 aa5.85□□□□□ -1.47
PRPF38A-202ENST00000474048 K7EQZ3 153 aa5.84□□□□□ -1.47
PRPF38A-202ENST00000474048 FP248Q71RG6 208 aaPredicted RBP5.84□□□□□ -1.47
PRPF38A-202ENST00000474048 A0A1B0GVX0 72 aa5.83□□□□□ -1.48
PRPF38A-202ENST00000474048 C8orf87E5RJ46 101 aa5.83□□□□□ -1.48
PRPF38A-202ENST00000474048 PRR15Q8IV56 129 aa5.83□□□□□ -1.48
PRPF38A-202ENST00000474048 Q8N9L7 120 aa5.83□□□□□ -1.48
PRPF38A-202ENST00000474048 DSCR10P59022 87 aa5.82□□□□□ -1.48
PRPF38A-202ENST00000474048 PRR4Q16378 134 aa5.82□□□□□ -1.48
PRPF38A-202ENST00000474048 HCG22E2RYF7 251 aa5.8□□□□□ -1.48
PRPF38A-202ENST00000474048 SCGB1A1P11684 91 aa5.8□□□□□ -1.48
PRPF38A-202ENST00000474048 LINC00313P59037 77 aa5.8□□□□□ -1.48
PRPF38A-202ENST00000474048 C8orf17Q9NRJ1 99 aa5.79□□□□□ -1.48
PRPF38A-202ENST00000474048 HERC2O95714 4834 aa5.79□□□□□ -1.48
PRPF38A-202ENST00000474048 IGLV7-46A0A075B6I9 117 aa5.78□□□□□ -1.48
PRPF38A-202ENST00000474048 A0A087WVE0 104 aa5.78□□□□□ -1.48
PRPF38A-202ENST00000474048 CASC2Q6XLA1 102 aa5.78□□□□□ -1.48
PRPF38A-202ENST00000474048 WFDC13Q8IUB5 93 aa5.78□□□□□ -1.48
PRPF38A-202ENST00000474048 hDV103S1A0JD37 113 aa5.77□□□□□ -1.49
PRPF38A-202ENST00000474048 FAM236AA0A1B0GUQ0 79 aa5.76□□□□□ -1.49
PRPF38A-202ENST00000474048 FAM236BA0A1B0GV22 79 aa5.76□□□□□ -1.49
PRPF38A-202ENST00000474048 NDUFS5O43920 106 aa5.76□□□□□ -1.49
PRPF38A-202ENST00000474048 C9orf92A6NGG3 77 aa5.75□□□□□ -1.49
PRPF38A-202ENST00000474048 DMBT1Q9UGM3 2413 aaPredicted RBP5.75□□□□□ -1.49
PRPF38A-202ENST00000474048 MMP24-AS1A0A0U1RRL7 71 aa5.74□□□□□ -1.49
PRPF38A-202ENST00000474048 XP32Q5T750 250 aa5.74□□□□□ -1.49
PRPF38A-202ENST00000474048 TMEM254Q8TBM7 123 aa5.74□□□□□ -1.49
PRPF38A-202ENST00000474048 LRP1Q07954 4544 aaKnown RBP5.73□□□□□ -1.49
PRPF38A-202ENST00000474048 MRPL34Q9BQ48 92 aaKnown RBP5.73□□□□□ -1.49
PRPF38A-202ENST00000474048 FAT3Q8TDW7 4589 aa5.72□□□□□ -1.49
PRPF38A-202ENST00000474048 ATOX1O00244 68 aa5.72□□□□□ -1.49
PRPF38A-202ENST00000474048 MYCBP2O75592 4640 aa5.71□□□□□ -1.5
PRPF38A-202ENST00000474048 SMIM20Q8N5G0 67 aa5.71□□□□□ -1.5
PRPF38A-202ENST00000474048 ABCA13Q86UQ4 5058 aa5.69□□□□□ -1.5
PRPF38A-202ENST00000474048 TPRXLQ17RH7 258 aa5.68□□□□□ -1.5
PRPF38A-202ENST00000474048 TP53AIP1Q9HCN2 124 aa5.68□□□□□ -1.5
PRPF38A-202ENST00000474048 NOTCH2NLQ7Z3S9 236 aa5.67□□□□□ -1.5
PRPF38A-202ENST00000474048 TNXBP22105 4242 aa5.66□□□□□ -1.5
PRPF38A-202ENST00000474048 KRTAP13-3Q3SY46 172 aa5.65□□□□□ -1.5
PRPF38A-202ENST00000474048 ANAPC13Q9BS18 74 aa5.65□□□□□ -1.5
PRPF38A-202ENST00000474048 UQCRQO14949 82 aa5.64□□□□□ -1.51
PRPF38A-202ENST00000474048 TRAV7A0A075B6U4 112 aa5.62□□□□□ -1.51
PRPF38A-202ENST00000474048 KRTAP16-1A8MUX0 517 aa5.62□□□□□ -1.51
PRPF38A-202ENST00000474048 MP68P56378 58 aa5.62□□□□□ -1.51
PRPF38A-202ENST00000474048 ATP11AUNQ6ZP68 121 aa5.62□□□□□ -1.51
PRPF38A-202ENST00000474048 Q8N9P0 234 aaPredicted RBP5.62□□□□□ -1.51
PRPF38A-202ENST00000474048 TRAV22A0A0B4J277 110 aa5.61□□□□□ -1.51
PRPF38A-202ENST00000474048 Q75L30 129 aa5.61□□□□□ -1.51
PRPF38A-202ENST00000474048 C20orf166-AS1Q96NR2 134 aa5.61□□□□□ -1.51
PRPF38A-202ENST00000474048 SERP2Q8N6R1 65 aa5.6□□□□□ -1.51
PRPF38A-202ENST00000474048 A8MUU9 505 aa5.59□□□□□ -1.51
PRPF38A-202ENST00000474048 OCR1Q9BZK8 76 aa5.59□□□□□ -1.51
PRPF38A-202ENST00000474048 H0Y9P7 68 aa5.58□□□□□ -1.52
PRPF38A-202ENST00000474048 RPL37P61927 97 aaKnown RBP5.58□□□□□ -1.52
PRPF38A-202ENST00000474048 C5orf47Q569G3 176 aa5.58□□□□□ -1.52
PRPF38A-202ENST00000474048 ZCCHC13Q8WW36 166 aaKnown RBP5.57□□□□□ -1.52
PRPF38A-202ENST00000474048 KRTAP4-8Q9BYQ9 185 aa5.56□□□□□ -1.52
PRPF38A-202ENST00000474048 H3BPC8 53 aa5.55□□□□□ -1.52
PRPF38A-202ENST00000474048 COX7CP15954 63 aa5.55□□□□□ -1.52
PRPF38A-202ENST00000474048 SEC61BP60468 96 aaKnown RBP5.55□□□□□ -1.52
PRPF38A-202ENST00000474048 PCLOQ9Y6V0 5065 aa5.54□□□□□ -1.52
PRPF38A-202ENST00000474048 LINC00208Q96KT6 92 aa5.53□□□□□ -1.52
PRPF38A-202ENST00000474048 LOC101927531A0A1B0GV80 90 aa5.52□□□□□ -1.53
PRPF38A-202ENST00000474048 C20orf197Q8N268 126 aa5.52□□□□□ -1.53
PRPF38A-202ENST00000474048 C1orf64Q8NEQ6 169 aa5.52□□□□□ -1.53
PRPF38A-202ENST00000474048 IGKV2D-30A0A075B6S6 120 aa5.51□□□□□ -1.53
PRPF38A-202ENST00000474048 IGKV2-30P06310 120 aa5.51□□□□□ -1.53
PRPF38A-202ENST00000474048 Q5W150 140 aa5.5□□□□□ -1.53
PRPF38A-202ENST00000474048 C7orf65Q6ZTY9 151 aa5.5□□□□□ -1.53
PRPF38A-202ENST00000474048 PCOTHQ58A44 107 aa5.49□□□□□ -1.53
PRPF38A-202ENST00000474048 PCP4P48539 62 aa5.48□□□□□ -1.53
PRPF38A-202ENST00000474048 SVIPQ8NHG7 77 aa5.48□□□□□ -1.53
PRPF38A-202ENST00000474048 SNURFQ9Y675 71 aa5.47□□□□□ -1.53
PRPF38A-202ENST00000474048 A0A0U1RQV1 116 aa5.45□□□□□ -1.54
PRPF38A-202ENST00000474048 NDUFC1O43677 76 aa5.45□□□□□ -1.54
PRPF38A-202ENST00000474048 KRTAP9-2Q9BYQ4 174 aa5.45□□□□□ -1.54
PRPF38A-202ENST00000474048 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.44□□□□□ -1.54
PRPF38A-202ENST00000474048 CCDC179H3BU77 68 aa5.43□□□□□ -1.54
PRPF38A-202ENST00000474048 SPINK7P58062 85 aa5.43□□□□□ -1.54
PRPF38A-202ENST00000474048 KLKP1Q107X0 134 aa5.43□□□□□ -1.54
PRPF38A-202ENST00000474048 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
PRPF38A-202ENST00000474048 CYP4F30PQ9H0H9 118 aa5.42□□□□□ -1.54
PRPF38A-202ENST00000474048 RBM12B-AS1Q9P1G2 102 aa5.38□□□□□ -1.55
PRPF38A-202ENST00000474048 FAM236DA0A1B0GTK5 79 aa5.36□□□□□ -1.55
PRPF38A-202ENST00000474048 FAM236CP0DP71 79 aa5.36□□□□□ -1.55
PRPF38A-202ENST00000474048 HERC1Q15751 4861 aa5.35□□□□□ -1.55
PRPF38A-202ENST00000474048 HRES1P13985 223 aa5.34□□□□□ -1.55
PRPF38A-202ENST00000474048 LPAP08519 4548 aa5.34□□□□□ -1.56
PRPF38A-202ENST00000474048 ATP5EP56381 51 aaPredicted RBP5.33□□□□□ -1.56
PRPF38A-202ENST00000474048 H7BZZ5 65 aa5.32□□□□□ -1.56
PRPF38A-202ENST00000474048 TMEM258P61165 79 aa5.32□□□□□ -1.56
PRPF38A-202ENST00000474048 C4orf26Q17RF5 130 aa5.32□□□□□ -1.56
PRPF38A-202ENST00000474048 SPANXA2-OT1Q8N9U9 137 aa5.32□□□□□ -1.56
PRPF38A-202ENST00000474048 KRTAP4-12Q9BQ66 201 aa5.32□□□□□ -1.56
PRPF38A-202ENST00000474048 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
PRPF38A-202ENST00000474048 COX6B2Q6YFQ2 88 aa5.3□□□□□ -1.56
PRPF38A-202ENST00000474048 A8MUN3 132 aa5.29□□□□□ -1.56
PRPF38A-202ENST00000474048 HMCN2Q8NDA2 5059 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms