RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 CAV3P56539 151 aa3.58□□□□□ -1.84
NUP35-208ENST00000472844 DNAH11Q96DT5 4516 aa3.57□□□□□ -1.84
NUP35-208ENST00000472844 KRTAP13-2Q52LG2 175 aa3.57□□□□□ -1.84
NUP35-208ENST00000472844 PRR9Q5T870 116 aa3.57□□□□□ -1.84
NUP35-208ENST00000472844 VPS13DQ5THJ4 4388 aa3.57□□□□□ -1.84
NUP35-208ENST00000472844 RNF213Q63HN8 5207 aa3.55□□□□□ -1.84
NUP35-208ENST00000472844 A0A1B0GU69 56 aa3.55□□□□□ -1.84
NUP35-208ENST00000472844 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
NUP35-208ENST00000472844 Q6ZQY7 126 aa3.55□□□□□ -1.84
NUP35-208ENST00000472844 DNAH2Q9P225 4427 aa3.55□□□□□ -1.84
NUP35-208ENST00000472844 FAT2Q9NYQ8 4349 aa3.55□□□□□ -1.84
NUP35-208ENST00000472844 DMBT1Q9UGM3 2413 aaPredicted RBP3.54□□□□□ -1.84
NUP35-208ENST00000472844 NDUFA4O00483 81 aa3.54□□□□□ -1.84
NUP35-208ENST00000472844 HMCN2Q8NDA2 5059 aa3.54□□□□□ -1.84
NUP35-208ENST00000472844 LINC00959A0A1B0GUT2 108 aa3.53□□□□□ -1.84
NUP35-208ENST00000472844 M0R1W7 72 aa3.53□□□□□ -1.84
NUP35-208ENST00000472844 MYCBP2O75592 4640 aa3.52□□□□□ -1.85
NUP35-208ENST00000472844 H0YGG7 62 aa3.5□□□□□ -1.85
NUP35-208ENST00000472844 NCR3O14931 201 aa3.5□□□□□ -1.85
NUP35-208ENST00000472844 ARL14EPLP0DKL9 152 aa3.5□□□□□ -1.85
NUP35-208ENST00000472844 COX7BP24311 80 aa3.5□□□□□ -1.85
NUP35-208ENST00000472844 KRTAP10-11P60412 298 aa3.5□□□□□ -1.85
NUP35-208ENST00000472844 SNRPGP62308 76 aaKnown RBP3.5□□□□□ -1.85
NUP35-208ENST00000472844 IGIPA6NJ69 53 aa3.49□□□□□ -1.85
NUP35-208ENST00000472844 I3L3M4 83 aa3.49□□□□□ -1.85
NUP35-208ENST00000472844 DEFB114Q30KQ6 69 aa3.49□□□□□ -1.85
NUP35-208ENST00000472844 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.49□□□□□ -1.85
NUP35-208ENST00000472844 DNAH6Q9C0G6 4158 aa3.49□□□□□ -1.85
NUP35-208ENST00000472844 KRTAP1-4P0C5Y4 121 aa3.48□□□□□ -1.85
NUP35-208ENST00000472844 Q6ZRN7 208 aaPredicted RBP3.48□□□□□ -1.85
NUP35-208ENST00000472844 MT3P25713 68 aa3.47□□□□□ -1.85
NUP35-208ENST00000472844 MUC2Q02817 5179 aa3.46□□□□□ -1.86
NUP35-208ENST00000472844 LINC01546A6NGU7 62 aa3.46□□□□□ -1.86
NUP35-208ENST00000472844 SMIM11BQ8TCY0 68 aa3.46□□□□□ -1.86
NUP35-208ENST00000472844 APOBP04114 4563 aaKnown RBP3.46□□□□□ -1.86
NUP35-208ENST00000472844 LRP1BQ9NZR2 4599 aa3.46□□□□□ -1.86
NUP35-208ENST00000472844 TNCP24821 2201 aa3.46□□□□□ -1.86
NUP35-208ENST00000472844 KRTAP10-7P60409 375 aaPredicted RBP3.45□□□□□ -1.86
NUP35-208ENST00000472844 RPL38P63173 70 aaKnown RBP3.45□□□□□ -1.86
NUP35-208ENST00000472844 HAMPP81172 84 aa3.45□□□□□ -1.86
NUP35-208ENST00000472844 DNAH17Q9UFH2 4485 aa3.45□□□□□ -1.86
NUP35-208ENST00000472844 PKD1P98161 4303 aa3.44□□□□□ -1.86
NUP35-208ENST00000472844 LYNX1G3V0Z9 82 aa3.44□□□□□ -1.86
NUP35-208ENST00000472844 LYNX1P0DP58 116 aa3.44□□□□□ -1.86
NUP35-208ENST00000472844 IGFL1Q6UW32 110 aa3.44□□□□□ -1.86
NUP35-208ENST00000472844 C10orf99Q6UWK7 81 aa3.44□□□□□ -1.86
NUP35-208ENST00000472844 PP632Q6XCG6 107 aa3.44□□□□□ -1.86
NUP35-208ENST00000472844 Q6ZRX8 168 aa3.44□□□□□ -1.86
NUP35-208ENST00000472844 PLAC4Q8WY50 150 aa3.44□□□□□ -1.86
NUP35-208ENST00000472844 TIMM8BQ9Y5J9 83 aaPredicted RBP3.44□□□□□ -1.86
NUP35-208ENST00000472844 KCNQ1DNQ9H478 68 aa3.43□□□□□ -1.86
NUP35-208ENST00000472844 FLG2Q5D862 2391 aaPredicted RBP3.43□□□□□ -1.86
NUP35-208ENST00000472844 ETDCA0A1B0GVM5 59 aa3.42□□□□□ -1.86
NUP35-208ENST00000472844 SPINK4O60575 86 aa3.42□□□□□ -1.86
NUP35-208ENST00000472844 FAT1Q14517 4588 aa3.42□□□□□ -1.86
NUP35-208ENST00000472844 SRRM2Q9UQ35 2752 aaKnown RBP3.41□□□□□ -1.86
NUP35-208ENST00000472844 SSBP3-AS1Q7Z2R9 100 aa3.41□□□□□ -1.86
NUP35-208ENST00000472844 FAT4Q6V0I7 4981 aa3.4□□□□□ -1.86
NUP35-208ENST00000472844 GVQW2A0A096LPI5 108 aaPredicted RBP3.4□□□□□ -1.87
NUP35-208ENST00000472844 G3V318 75 aa3.4□□□□□ -1.87
NUP35-208ENST00000472844 LY6G6CO95867 125 aa3.4□□□□□ -1.87
NUP35-208ENST00000472844 KRTAP10-8P60410 259 aa3.4□□□□□ -1.87
NUP35-208ENST00000472844 H0YGX0 51 aa3.39□□□□□ -1.87
NUP35-208ENST00000472844 CPSF4LA6NMK7 179 aaKnown RBP3.38□□□□□ -1.87
NUP35-208ENST00000472844 DNAH5Q8TE73 4624 aa3.37□□□□□ -1.87
NUP35-208ENST00000472844 CCL22O00626 93 aa3.37□□□□□ -1.87
NUP35-208ENST00000472844 DEFB108BQ8NET1 73 aa3.37□□□□□ -1.87
NUP35-208ENST00000472844 MRPL33O75394 65 aaKnown RBP3.35□□□□□ -1.87
NUP35-208ENST00000472844 BRD3OSQ6XYD6 125 aa3.35□□□□□ -1.87
NUP35-208ENST00000472844 SORL1Q92673 2214 aa3.35□□□□□ -1.87
NUP35-208ENST00000472844 LRP2P98164 4655 aa3.34□□□□□ -1.87
NUP35-208ENST00000472844 A0A1B0GVY2 172 aa3.34□□□□□ -1.87
NUP35-208ENST00000472844 FXYD6P3P58550 94 aa3.34□□□□□ -1.87
NUP35-208ENST00000472844 VPS13BQ7Z7G8 4022 aa3.34□□□□□ -1.87
NUP35-208ENST00000472844 NDUFA3O95167 84 aa3.33□□□□□ -1.88
NUP35-208ENST00000472844 SPINK13Q1W4C9 94 aa3.33□□□□□ -1.88
NUP35-208ENST00000472844 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
NUP35-208ENST00000472844 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
NUP35-208ENST00000472844 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
NUP35-208ENST00000472844 DEFB131BA0A096LNP1 70 aa3.3□□□□□ -1.88
NUP35-208ENST00000472844 PKHD1L1Q86WI1 4243 aa3.3□□□□□ -1.88
NUP35-208ENST00000472844 GAS8-AS1O95177 125 aa3.29□□□□□ -1.88
NUP35-208ENST00000472844 UNQ6190/PRO20217Q6UXQ8 127 aa3.29□□□□□ -1.88
NUP35-208ENST00000472844 LINC00575Q6W349 94 aa3.28□□□□□ -1.88
NUP35-208ENST00000472844 ANGP03950 147 aaKnown RBP3.27□□□□□ -1.89
NUP35-208ENST00000472844 KRTAP10-6P60371 365 aaPredicted RBP3.27□□□□□ -1.89
NUP35-208ENST00000472844 FSIP2Q5CZC0 6907 aa3.27□□□□□ -1.89
NUP35-208ENST00000472844 KRTAP5-9P26371 169 aa3.26□□□□□ -1.89
NUP35-208ENST00000472844 TMEM167BQ9NRX6 74 aa3.26□□□□□ -1.89
NUP35-208ENST00000472844 KRTAP1-5Q9BYS1 174 aa3.25□□□□□ -1.89
NUP35-208ENST00000472844 LRP1Q07954 4544 aaKnown RBP3.24□□□□□ -1.89
NUP35-208ENST00000472844 CRIP1P50238 77 aa3.23□□□□□ -1.89
NUP35-208ENST00000472844 RPL37P61927 97 aaKnown RBP3.23□□□□□ -1.89
NUP35-208ENST00000472844 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
NUP35-208ENST00000472844 UBE2DNLQ8IWF7 75 aa3.23□□□□□ -1.89
NUP35-208ENST00000472844 FAT3Q8TDW7 4589 aa3.22□□□□□ -1.89
NUP35-208ENST00000472844 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
NUP35-208ENST00000472844 LINC00158P58513 81 aa3.19□□□□□ -1.9
NUP35-208ENST00000472844 KRTAP13-4Q3LI77 160 aa3.19□□□□□ -1.9
NUP35-208ENST00000472844 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms