RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 WWC2-AS2Q96NR7 200 aa8.04□□□□□ -1.12
SCAMP4-207ENST00000472442 SPRR1BP22528 89 aa8.03□□□□□ -1.12
SCAMP4-207ENST00000472442 FRAS1Q86XX4 4008 aa8.02□□□□□ -1.13
SCAMP4-207ENST00000472442 SPAG11AQ6PDA7 123 aa8.01□□□□□ -1.13
SCAMP4-207ENST00000472442 DNAH11Q96DT5 4516 aa8.01□□□□□ -1.13
SCAMP4-207ENST00000472442 DNAH5Q8TE73 4624 aa8.01□□□□□ -1.13
SCAMP4-207ENST00000472442 KRTAP13-1Q8IUC0 172 aa8□□□□□ -1.13
SCAMP4-207ENST00000472442 A6NN06 94 aa8□□□□□ -1.13
SCAMP4-207ENST00000472442 CDC42SE1Q9NRR8 79 aa7.99□□□□□ -1.13
SCAMP4-207ENST00000472442 RBM12B-AS1Q9P1G2 102 aa7.99□□□□□ -1.13
SCAMP4-207ENST00000472442 ALMS1Q8TCU4 4167 aa7.99□□□□□ -1.13
SCAMP4-207ENST00000472442 IGLV5-52A0A0A0MRZ9 124 aa7.98□□□□□ -1.13
SCAMP4-207ENST00000472442 LINC01558Q9Y6Z2 57 aa7.97□□□□□ -1.13
SCAMP4-207ENST00000472442 PLAC8Q9NZF1 115 aa7.96□□□□□ -1.14
SCAMP4-207ENST00000472442 FAT2Q9NYQ8 4349 aa7.95□□□□□ -1.14
SCAMP4-207ENST00000472442 Q96NJ1 140 aa7.95□□□□□ -1.14
SCAMP4-207ENST00000472442 TP53AIP1Q9HCN2 124 aa7.95□□□□□ -1.14
SCAMP4-207ENST00000472442 NDUFS5O43920 106 aa7.95□□□□□ -1.14
SCAMP4-207ENST00000472442 ASB16-AS1Q495Z4 193 aa7.94□□□□□ -1.14
SCAMP4-207ENST00000472442 KRTAP10-2P60368 255 aa7.94□□□□□ -1.14
SCAMP4-207ENST00000472442 MOBPQ13875 183 aa7.94□□□□□ -1.14
SCAMP4-207ENST00000472442 C8orf17Q9NRJ1 99 aa7.93□□□□□ -1.14
SCAMP4-207ENST00000472442 PKD1P98161 4303 aa7.93□□□□□ -1.14
SCAMP4-207ENST00000472442 IGLV9-49A0A0B4J1Y8 123 aa7.93□□□□□ -1.14
SCAMP4-207ENST00000472442 PSORS1C2Q9UIG4 136 aa7.93□□□□□ -1.14
SCAMP4-207ENST00000472442 HRES1P13985 223 aa7.92□□□□□ -1.14
SCAMP4-207ENST00000472442 SPINK7P58062 85 aa7.92□□□□□ -1.14
SCAMP4-207ENST00000472442 IGHV6-1A0A0B4J1U7 121 aa7.91□□□□□ -1.14
SCAMP4-207ENST00000472442 C7orf65Q6ZTY9 151 aa7.88□□□□□ -1.15
SCAMP4-207ENST00000472442 SACSQ9NZJ4 4579 aa7.87□□□□□ -1.15
SCAMP4-207ENST00000472442 A0A1B0GVX0 72 aa7.86□□□□□ -1.15
SCAMP4-207ENST00000472442 MRPL34Q9BQ48 92 aaKnown RBP7.85□□□□□ -1.15
SCAMP4-207ENST00000472442 ZNF861PO60384 105 aa7.84□□□□□ -1.15
SCAMP4-207ENST00000472442 CIRBP-AS1Q8TBR5 109 aa7.84□□□□□ -1.15
SCAMP4-207ENST00000472442 LRP1BQ9NZR2 4599 aa7.84□□□□□ -1.15
SCAMP4-207ENST00000472442 A0A087X002 238 aa7.84□□□□□ -1.15
SCAMP4-207ENST00000472442 LINC00483Q53H64 154 aa7.84□□□□□ -1.15
SCAMP4-207ENST00000472442 NOTCH2NLQ7Z3S9 236 aa7.84□□□□□ -1.15
SCAMP4-207ENST00000472442 CDK2AP2O75956 126 aa7.83□□□□□ -1.16
SCAMP4-207ENST00000472442 PRR26Q8N8Z3 221 aa7.83□□□□□ -1.16
SCAMP4-207ENST00000472442 KRTAP10-1P60331 282 aa7.82□□□□□ -1.16
SCAMP4-207ENST00000472442 Q6ZSA8 131 aa7.81□□□□□ -1.16
SCAMP4-207ENST00000472442 ANAPC11Q9NYG5 84 aa7.81□□□□□ -1.16
SCAMP4-207ENST00000472442 IGLV7-43P04211 117 aa7.8□□□□□ -1.16
SCAMP4-207ENST00000472442 ZNF706Q9Y5V0 76 aaPredicted RBP7.78□□□□□ -1.16
SCAMP4-207ENST00000472442 Q5W150 140 aa7.77□□□□□ -1.17
SCAMP4-207ENST00000472442 PKHD1P08F94 4074 aa7.75□□□□□ -1.17
SCAMP4-207ENST00000472442 SPINK6Q6UWN8 80 aa7.74□□□□□ -1.17
SCAMP4-207ENST00000472442 LINC00313P59037 77 aa7.73□□□□□ -1.17
SCAMP4-207ENST00000472442 KRTAP13-3Q3SY46 172 aa7.72□□□□□ -1.17
SCAMP4-207ENST00000472442 PRAC1Q96KF2 57 aa7.72□□□□□ -1.17
SCAMP4-207ENST00000472442 VPS13BQ7Z7G8 4022 aa7.71□□□□□ -1.17
SCAMP4-207ENST00000472442 ACYP2P14621 99 aa7.71□□□□□ -1.18
SCAMP4-207ENST00000472442 KMT2CQ8NEZ4 4911 aaKnown RBP7.67□□□□□ -1.18
SCAMP4-207ENST00000472442 ADM2Q7Z4H4 148 aa7.67□□□□□ -1.18
SCAMP4-207ENST00000472442 DYNC1H1Q14204 4646 aaKnown RBP7.67□□□□□ -1.18
SCAMP4-207ENST00000472442 RYR2Q92736 4967 aa7.67□□□□□ -1.18
SCAMP4-207ENST00000472442 DMAC1Q96GE9 116 aa7.65□□□□□ -1.19
SCAMP4-207ENST00000472442 A0A1B0GU69 56 aa7.63□□□□□ -1.19
SCAMP4-207ENST00000472442 C8orf87E5RJ46 101 aa7.63□□□□□ -1.19
SCAMP4-207ENST00000472442 RETNLBQ9BQ08 111 aa7.62□□□□□ -1.19
SCAMP4-207ENST00000472442 A0A1B0GVY2 172 aa7.61□□□□□ -1.19
SCAMP4-207ENST00000472442 KRTAP13-2Q52LG2 175 aa7.6□□□□□ -1.19
SCAMP4-207ENST00000472442 PLA2G1BP04054 148 aaKnown RBP7.59□□□□□ -1.19
SCAMP4-207ENST00000472442 KRTAP1-4P0C5Y4 121 aa7.59□□□□□ -1.19
SCAMP4-207ENST00000472442 SSBP3-AS1Q7Z2R9 100 aa7.59□□□□□ -1.19
SCAMP4-207ENST00000472442 SPATA8Q6RVD6 105 aa7.58□□□□□ -1.2
SCAMP4-207ENST00000472442 APOBP04114 4563 aaKnown RBP7.57□□□□□ -1.2
SCAMP4-207ENST00000472442 FAT1Q14517 4588 aa7.55□□□□□ -1.2
SCAMP4-207ENST00000472442 MIR22HGQ0VDD5 57 aa7.55□□□□□ -1.2
SCAMP4-207ENST00000472442 FAM229AH3BQW9 127 aa7.54□□□□□ -1.2
SCAMP4-207ENST00000472442 IGKV2-30P06310 120 aa7.53□□□□□ -1.2
SCAMP4-207ENST00000472442 LINC01554Q52M75 96 aa7.53□□□□□ -1.2
SCAMP4-207ENST00000472442 UQCR11O14957 56 aa7.52□□□□□ -1.21
SCAMP4-207ENST00000472442 SMR3BP02814 79 aaPredicted RBP7.52□□□□□ -1.21
SCAMP4-207ENST00000472442 RYR3Q15413 4870 aa7.47□□□□□ -1.21
SCAMP4-207ENST00000472442 KRTAP10-4P60372 401 aaPredicted RBP7.46□□□□□ -1.22
SCAMP4-207ENST00000472442 IGKV2D-30A0A075B6S6 120 aa7.45□□□□□ -1.22
SCAMP4-207ENST00000472442 C4orf48Q5BLP8 95 aa7.43□□□□□ -1.22
SCAMP4-207ENST00000472442 TYMSOSQ8TAI1 123 aa7.43□□□□□ -1.22
SCAMP4-207ENST00000472442 CSAG1Q6PB30 78 aa7.42□□□□□ -1.22
SCAMP4-207ENST00000472442 KRTAP16-1A8MUX0 517 aa7.41□□□□□ -1.22
SCAMP4-207ENST00000472442 SPINK1P00995 79 aa7.37□□□□□ -1.23
SCAMP4-207ENST00000472442 PKHD1L1Q86WI1 4243 aa7.35□□□□□ -1.23
SCAMP4-207ENST00000472442 LINC00304Q8N9R0 145 aa7.33□□□□□ -1.24
SCAMP4-207ENST00000472442 HSPG2P98160 4391 aa7.33□□□□□ -1.24
SCAMP4-207ENST00000472442 Q8N1X5 172 aa7.31□□□□□ -1.24
SCAMP4-207ENST00000472442 H3BS24 57 aa7.3□□□□□ -1.24
SCAMP4-207ENST00000472442 RPS29P62273 56 aaKnown RBP7.29□□□□□ -1.24
SCAMP4-207ENST00000472442 RYR1P21817 5038 aa7.28□□□□□ -1.24
SCAMP4-207ENST00000472442 LRP1Q07954 4544 aaKnown RBP7.27□□□□□ -1.25
SCAMP4-207ENST00000472442 H0YAA0 97 aa7.23□□□□□ -1.25
SCAMP4-207ENST00000472442 KRTAP17-1Q9BYP8 105 aa7.23□□□□□ -1.25
SCAMP4-207ENST00000472442 KIAA1109Q2LD37 5005 aa7.21□□□□□ -1.25
SCAMP4-207ENST00000472442 TNXBP22105 4242 aa7.21□□□□□ -1.25
SCAMP4-207ENST00000472442 A8MUU9 505 aa7.21□□□□□ -1.26
SCAMP4-207ENST00000472442 Q5VSD8 79 aa7.21□□□□□ -1.26
SCAMP4-207ENST00000472442 EPPK1P58107 5090 aaKnown RBP7.2□□□□□ -1.26
SCAMP4-207ENST00000472442 KRTAP25-1Q3LHN0 102 aa7.16□□□□□ -1.26
SCAMP4-207ENST00000472442 FAT3Q8TDW7 4589 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms