RNA–Protein interactions for RNA: ENST00000472219.5

SNX21-209, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 1,858 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-209ENST00000472219 C1orf195Q5TG92 126 aa12.21□□□□□ -0.45
SNX21-209ENST00000472219 DNAH8Q96JB1 4490 aa12.2□□□□□ -0.46
SNX21-209ENST00000472219 TGP01266 2768 aa12.2□□□□□ -0.46
SNX21-209ENST00000472219 FBN3Q75N90 2809 aa12.2□□□□□ -0.46
SNX21-209ENST00000472219 PCOTHQ58A44 107 aa12.19□□□□□ -0.46
SNX21-209ENST00000472219 Q6ZSA8 131 aa12.19□□□□□ -0.46
SNX21-209ENST00000472219 A0A087X002 238 aa12.18□□□□□ -0.46
SNX21-209ENST00000472219 NOTCH2NLQ7Z3S9 236 aa12.18□□□□□ -0.46
SNX21-209ENST00000472219 DNAH6Q9C0G6 4158 aa12.17□□□□□ -0.46
SNX21-209ENST00000472219 LOC101927531A0A1B0GV80 90 aa12.17□□□□□ -0.46
SNX21-209ENST00000472219 LIMD2Q9BT23 127 aa12.15□□□□□ -0.46
SNX21-209ENST00000472219 COA5Q86WW8 74 aa12.14□□□□□ -0.47
SNX21-209ENST00000472219 PSPHP1O15172 72 aa12.12□□□□□ -0.47
SNX21-209ENST00000472219 KRTAP10-1P60331 282 aa12.11□□□□□ -0.47
SNX21-209ENST00000472219 FRAS1Q86XX4 4008 aa12.1□□□□□ -0.47
SNX21-209ENST00000472219 Q8N9P0 234 aaPredicted RBP12.09□□□□□ -0.47
SNX21-209ENST00000472219 LINC00313P59037 77 aa12.06□□□□□ -0.48
SNX21-209ENST00000472219 KRTAP13-2Q52LG2 175 aa12.06□□□□□ -0.48
SNX21-209ENST00000472219 A8MUN3 132 aa12.04□□□□□ -0.48
SNX21-209ENST00000472219 KRTAP13-3Q3SY46 172 aa12.04□□□□□ -0.48
SNX21-209ENST00000472219 ALMS1Q8TCU4 4167 aa12.02□□□□□ -0.49
SNX21-209ENST00000472219 FAM229AH3BQW9 127 aa12.01□□□□□ -0.49
SNX21-209ENST00000472219 Q5W150 140 aa12.01□□□□□ -0.49
SNX21-209ENST00000472219 Q5VV11 94 aa12□□□□□ -0.49
SNX21-209ENST00000472219 DNHD1Q96M86 4753 aa11.98□□□□□ -0.49
SNX21-209ENST00000472219 PRR15LQ9BU68 103 aa11.97□□□□□ -0.49
SNX21-209ENST00000472219 KRTAP1-4P0C5Y4 121 aa11.97□□□□□ -0.49
SNX21-209ENST00000472219 KRTAP21-3Q3LHN1 58 aa11.97□□□□□ -0.49
SNX21-209ENST00000472219 DNAH5Q8TE73 4624 aa11.97□□□□□ -0.49
SNX21-209ENST00000472219 DNAH11Q96DT5 4516 aa11.96□□□□□ -0.5
SNX21-209ENST00000472219 HRES1P13985 223 aa11.95□□□□□ -0.5
SNX21-209ENST00000472219 C4orf48Q5BLP8 95 aa11.95□□□□□ -0.5
SNX21-209ENST00000472219 CHKB-CPT1BH3BT56 60 aa11.92□□□□□ -0.5
SNX21-209ENST00000472219 Q75L30 129 aa11.91□□□□□ -0.5
SNX21-209ENST00000472219 PLA2G1BP04054 148 aaKnown RBP11.9□□□□□ -0.5
SNX21-209ENST00000472219 LINC01558Q9Y6Z2 57 aa11.89□□□□□ -0.51
SNX21-209ENST00000472219 ACYP2P14621 99 aa11.89□□□□□ -0.51
SNX21-209ENST00000472219 SPINK1P00995 79 aa11.88□□□□□ -0.51
SNX21-209ENST00000472219 TYMSOSQ8TAI1 123 aa11.88□□□□□ -0.51
SNX21-209ENST00000472219 SPAG11AQ6PDA7 123 aa11.85□□□□□ -0.51
SNX21-209ENST00000472219 KRTAP16-1A8MUX0 517 aa11.85□□□□□ -0.51
SNX21-209ENST00000472219 PKD1P98161 4303 aa11.84□□□□□ -0.51
SNX21-209ENST00000472219 IGKV2-30P06310 120 aa11.83□□□□□ -0.52
SNX21-209ENST00000472219 DMAC1Q96GE9 116 aa11.81□□□□□ -0.52
SNX21-209ENST00000472219 RPS29P62273 56 aaKnown RBP11.79□□□□□ -0.52
SNX21-209ENST00000472219 FAT2Q9NYQ8 4349 aa11.79□□□□□ -0.52
SNX21-209ENST00000472219 A6NED7 52 aa11.78□□□□□ -0.52
SNX21-209ENST00000472219 LRP1BQ9NZR2 4599 aa11.77□□□□□ -0.53
SNX21-209ENST00000472219 RETNLBQ9BQ08 111 aa11.76□□□□□ -0.53
SNX21-209ENST00000472219 LINC00304Q8N9R0 145 aa11.73□□□□□ -0.53
SNX21-209ENST00000472219 PRR26Q8N8Z3 221 aa11.7□□□□□ -0.54
SNX21-209ENST00000472219 HYDINQ4G0P3 5121 aa11.69□□□□□ -0.54
SNX21-209ENST00000472219 CDC42SE1Q9NRR8 79 aa11.67□□□□□ -0.54
SNX21-209ENST00000472219 IGKV2D-30A0A075B6S6 120 aa11.66□□□□□ -0.54
SNX21-209ENST00000472219 VPS13BQ7Z7G8 4022 aa11.65□□□□□ -0.54
SNX21-209ENST00000472219 ATP11AUNQ6ZP68 121 aa11.64□□□□□ -0.55
SNX21-209ENST00000472219 LCA10Q71F78 164 aa11.63□□□□□ -0.55
SNX21-209ENST00000472219 A8MU10 97 aa11.6□□□□□ -0.55
SNX21-209ENST00000472219 PMAIP1Q13794 54 aa11.6□□□□□ -0.55
SNX21-209ENST00000472219 C7orf65Q6ZTY9 151 aa11.56□□□□□ -0.56
SNX21-209ENST00000472219 SPTSSBQ8NFR3 76 aa11.56□□□□□ -0.56
SNX21-209ENST00000472219 SMR3BP02814 79 aaPredicted RBP11.55□□□□□ -0.56
SNX21-209ENST00000472219 A0A1B0GVY2 172 aa11.54□□□□□ -0.56
SNX21-209ENST00000472219 SPINK7P58062 85 aa11.53□□□□□ -0.56
SNX21-209ENST00000472219 A0A1B0GU69 56 aa11.5□□□□□ -0.57
SNX21-209ENST00000472219 KRTAP10-4P60372 401 aaPredicted RBP11.44□□□□□ -0.58
SNX21-209ENST00000472219 C20orf166-AS1Q96NR2 134 aa11.42□□□□□ -0.58
SNX21-209ENST00000472219 SACSQ9NZJ4 4579 aa11.42□□□□□ -0.58
SNX21-209ENST00000472219 A8MUU9 505 aa11.41□□□□□ -0.58
SNX21-209ENST00000472219 PKHD1P08F94 4074 aa11.41□□□□□ -0.58
SNX21-209ENST00000472219 A6NN06 94 aa11.37□□□□□ -0.59
SNX21-209ENST00000472219 C9orf92A6NGG3 77 aa11.36□□□□□ -0.59
SNX21-209ENST00000472219 KTN1-AS1Q86SY8 53 aa11.36□□□□□ -0.59
SNX21-209ENST00000472219 DYNC1H1Q14204 4646 aaKnown RBP11.33□□□□□ -0.6
SNX21-209ENST00000472219 UQCR11O14957 56 aa11.31□□□□□ -0.6
SNX21-209ENST00000472219 Q8N1X5 172 aa11.31□□□□□ -0.6
SNX21-209ENST00000472219 SPATA8Q6RVD6 105 aa11.27□□□□□ -0.6
SNX21-209ENST00000472219 SEC61GP60059 68 aa11.25□□□□□ -0.61
SNX21-209ENST00000472219 PKHD1L1Q86WI1 4243 aa11.24□□□□□ -0.61
SNX21-209ENST00000472219 MIR22HGQ0VDD5 57 aa11.23□□□□□ -0.61
SNX21-209ENST00000472219 APOBP04114 4563 aaKnown RBP11.22□□□□□ -0.61
SNX21-209ENST00000472219 FAT1Q14517 4588 aa11.13□□□□□ -0.63
SNX21-209ENST00000472219 FLG2Q5D862 2391 aaPredicted RBP11.07□□□□□ -0.64
SNX21-209ENST00000472219 RYR2Q92736 4967 aa11.07□□□□□ -0.64
SNX21-209ENST00000472219 KRTAP10-8P60410 259 aa11.06□□□□□ -0.64
SNX21-209ENST00000472219 KRTAP3-1Q9BYR8 98 aa11.06□□□□□ -0.64
SNX21-209ENST00000472219 Q5VSD8 79 aa11.04□□□□□ -0.64
SNX21-209ENST00000472219 COX6B2Q6YFQ2 88 aa11.04□□□□□ -0.64
SNX21-209ENST00000472219 RBM12B-AS1Q9P1G2 102 aa10.95□□□□□ -0.66
SNX21-209ENST00000472219 RPL37P61927 97 aaKnown RBP10.92□□□□□ -0.66
SNX21-209ENST00000472219 A0A1B0GU33 70 aa10.89□□□□□ -0.67
SNX21-209ENST00000472219 H1FX-AS1Q4G0G2 97 aa10.85□□□□□ -0.67
SNX21-209ENST00000472219 KMT2CQ8NEZ4 4911 aaKnown RBP10.83□□□□□ -0.68
SNX21-209ENST00000472219 XP32Q5T750 250 aa10.83□□□□□ -0.68
SNX21-209ENST00000472219 H0YAA0 97 aa10.82□□□□□ -0.68
SNX21-209ENST00000472219 TNXBP22105 4242 aa10.81□□□□□ -0.68
SNX21-209ENST00000472219 FAT3Q8TDW7 4589 aa10.81□□□□□ -0.68
SNX21-209ENST00000472219 HSPG2P98160 4391 aa10.74□□□□□ -0.69
SNX21-209ENST00000472219 PRAC1Q96KF2 57 aa10.73□□□□□ -0.69
SNX21-209ENST00000472219 LRP1Q07954 4544 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms