RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 Q8N377 158 aa7.41□□□□□ -1.22
LTA-215ENST00000471842 DHRS4-AS1Q9P1J3 65 aa7.41□□□□□ -1.22
LTA-215ENST00000471842 C6orf99Q4VX62 202 aa7.4□□□□□ -1.22
LTA-215ENST00000471842 DEFB105AQ8NG35 78 aa7.4□□□□□ -1.22
LTA-215ENST00000471842 MUC17Q685J3 4493 aa7.38□□□□□ -1.23
LTA-215ENST00000471842 RPS29P62273 56 aaKnown RBP7.38□□□□□ -1.23
LTA-215ENST00000471842 A0A087WVE0 104 aa7.37□□□□□ -1.23
LTA-215ENST00000471842 ELOF1P60002 83 aaKnown RBP7.37□□□□□ -1.23
LTA-215ENST00000471842 LINC00846Q9NV44 126 aa7.36□□□□□ -1.23
LTA-215ENST00000471842 F8WEM9 126 aa7.35□□□□□ -1.23
LTA-215ENST00000471842 LIMD2Q9BT23 127 aa7.34□□□□□ -1.23
LTA-215ENST00000471842 SPRR1BP22528 89 aa7.33□□□□□ -1.24
LTA-215ENST00000471842 FAT4Q6V0I7 4981 aa7.33□□□□□ -1.24
LTA-215ENST00000471842 NDUFS5O43920 106 aa7.32□□□□□ -1.24
LTA-215ENST00000471842 SEC61BP60468 96 aaKnown RBP7.32□□□□□ -1.24
LTA-215ENST00000471842 KTN1-AS1Q86SY8 53 aa7.32□□□□□ -1.24
LTA-215ENST00000471842 H0YGX0 51 aa7.31□□□□□ -1.24
LTA-215ENST00000471842 Q1T7F1 81 aa7.31□□□□□ -1.24
LTA-215ENST00000471842 ASB16-AS1Q495Z4 193 aa7.31□□□□□ -1.24
LTA-215ENST00000471842 JMJD7-PLA2G4BH0Y9G9 81 aa7.3□□□□□ -1.24
LTA-215ENST00000471842 UBL5Q9BZL1 73 aa7.3□□□□□ -1.24
LTA-215ENST00000471842 C9orf92A6NGG3 77 aa7.29□□□□□ -1.24
LTA-215ENST00000471842 RBM12B-AS1Q9P1G2 102 aa7.29□□□□□ -1.24
LTA-215ENST00000471842 XP32Q5T750 250 aa7.28□□□□□ -1.24
LTA-215ENST00000471842 LCE2AQ5TA79 106 aaPredicted RBP7.28□□□□□ -1.24
LTA-215ENST00000471842 SMIM11BQ8TCY0 68 aa7.28□□□□□ -1.24
LTA-215ENST00000471842 C14orf132Q9NPU4 83 aa7.28□□□□□ -1.24
LTA-215ENST00000471842 A0A0G2JQZ4 141 aa7.27□□□□□ -1.25
LTA-215ENST00000471842 MPLKIPQ8TAP9 179 aa7.26□□□□□ -1.25
LTA-215ENST00000471842 KRTAP4-1Q9BYQ7 146 aa7.25□□□□□ -1.25
LTA-215ENST00000471842 SMIM29Q86T20 159 aa7.24□□□□□ -1.25
LTA-215ENST00000471842 TRBV7-4A0A0J9YYF1 115 aa7.24□□□□□ -1.25
LTA-215ENST00000471842 LINC01547P58512 204 aaPredicted RBP7.24□□□□□ -1.25
LTA-215ENST00000471842 IGLV5-48A0A075B6I7 105 aa7.23□□□□□ -1.25
LTA-215ENST00000471842 Q6ZVQ6 151 aa7.23□□□□□ -1.25
LTA-215ENST00000471842 FAM218AQ96MZ4 157 aa7.23□□□□□ -1.25
LTA-215ENST00000471842 CXCL6P80162 114 aa7.22□□□□□ -1.25
LTA-215ENST00000471842 ORMDL1Q9P0S3 153 aa7.22□□□□□ -1.25
LTA-215ENST00000471842 SNURFQ9Y675 71 aa7.22□□□□□ -1.25
LTA-215ENST00000471842 KRTAP9-2Q9BYQ4 174 aa7.21□□□□□ -1.26
LTA-215ENST00000471842 PCOTHQ58A44 107 aa7.19□□□□□ -1.26
LTA-215ENST00000471842 Q6ZQY7 126 aa7.18□□□□□ -1.26
LTA-215ENST00000471842 TMEM254Q8TBM7 123 aa7.18□□□□□ -1.26
LTA-215ENST00000471842 LINC00575Q6W349 94 aa7.17□□□□□ -1.26
LTA-215ENST00000471842 IGLV8-61A0A075B6I0 122 aa7.17□□□□□ -1.26
LTA-215ENST00000471842 hDV103S1A0JD37 113 aa7.17□□□□□ -1.26
LTA-215ENST00000471842 PDE6GP18545 87 aa7.16□□□□□ -1.26
LTA-215ENST00000471842 TMEM256-PLSCR3K7ERE1 68 aa7.15□□□□□ -1.27
LTA-215ENST00000471842 NREPQ16612 68 aa7.15□□□□□ -1.27
LTA-215ENST00000471842 H3BQ85 93 aa7.14□□□□□ -1.27
LTA-215ENST00000471842 LCE2DQ5TA82 110 aaPredicted RBP7.14□□□□□ -1.27
LTA-215ENST00000471842 ATP11AUNQ6ZP68 121 aa7.14□□□□□ -1.27
LTA-215ENST00000471842 LOC110117498A0A087WWA1 95 aa7.13□□□□□ -1.27
LTA-215ENST00000471842 H3BS24 57 aa7.12□□□□□ -1.27
LTA-215ENST00000471842 C8orf87E5RJ46 101 aa7.11□□□□□ -1.27
LTA-215ENST00000471842 LCA10Q71F78 164 aa7.11□□□□□ -1.27
LTA-215ENST00000471842 IGFL1Q6UW32 110 aa7.1□□□□□ -1.27
LTA-215ENST00000471842 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.1□□□□□ -1.27
LTA-215ENST00000471842 C7orf65Q6ZTY9 151 aa7.1□□□□□ -1.27
LTA-215ENST00000471842 CYP4F30PQ9H0H9 118 aa7.09□□□□□ -1.27
LTA-215ENST00000471842 TRAV22A0A0B4J277 110 aa7.08□□□□□ -1.28
LTA-215ENST00000471842 RPL37P61927 97 aaKnown RBP7.06□□□□□ -1.28
LTA-215ENST00000471842 Q6ZQT0 140 aa7.06□□□□□ -1.28
LTA-215ENST00000471842 BPY2O14599 106 aa7.05□□□□□ -1.28
LTA-215ENST00000471842 A6NN06 94 aa7.04□□□□□ -1.28
LTA-215ENST00000471842 LCE2CQ5TA81 110 aa7.04□□□□□ -1.28
LTA-215ENST00000471842 COX6B2Q6YFQ2 88 aa7.02□□□□□ -1.29
LTA-215ENST00000471842 OCR1Q9BZK8 76 aa7.02□□□□□ -1.29
LTA-215ENST00000471842 C1orf64Q8NEQ6 169 aa7□□□□□ -1.29
LTA-215ENST00000471842 KRTAP9-6A0A140TA67 174 aa6.99□□□□□ -1.29
LTA-215ENST00000471842 PSPHP1O15172 72 aa6.99□□□□□ -1.29
LTA-215ENST00000471842 MT1HP80294 61 aa6.99□□□□□ -1.29
LTA-215ENST00000471842 KRTAP19-2Q3LHN2 52 aa6.99□□□□□ -1.29
LTA-215ENST00000471842 Q5VV11 94 aa6.99□□□□□ -1.29
LTA-215ENST00000471842 A8MUN3 132 aa6.98□□□□□ -1.29
LTA-215ENST00000471842 M0R2T5 61 aa6.97□□□□□ -1.29
LTA-215ENST00000471842 HCG22E2RYF7 251 aa6.96□□□□□ -1.3
LTA-215ENST00000471842 NDUFB1O75438 58 aa6.96□□□□□ -1.3
LTA-215ENST00000471842 Q75L30 129 aa6.96□□□□□ -1.3
LTA-215ENST00000471842 Q96NJ1 140 aa6.96□□□□□ -1.3
LTA-215ENST00000471842 A0A087WSZ3 146 aa6.95□□□□□ -1.3
LTA-215ENST00000471842 CHKB-CPT1BH3BT56 60 aa6.94□□□□□ -1.3
LTA-215ENST00000471842 CDC42SE1Q9NRR8 79 aa6.94□□□□□ -1.3
LTA-215ENST00000471842 ZCCHC13Q8WW36 166 aaKnown RBP6.92□□□□□ -1.3
LTA-215ENST00000471842 LOC101927531A0A1B0GV80 90 aa6.91□□□□□ -1.3
LTA-215ENST00000471842 SPTSSBQ8NFR3 76 aa6.91□□□□□ -1.3
LTA-215ENST00000471842 IGKV4-1P06312 121 aa6.89□□□□□ -1.31
LTA-215ENST00000471842 DSCR10P59022 87 aa6.88□□□□□ -1.31
LTA-215ENST00000471842 A0A1W2PNM2 257 aa6.86□□□□□ -1.31
LTA-215ENST00000471842 KRTAP10-6P60371 365 aaPredicted RBP6.86□□□□□ -1.31
LTA-215ENST00000471842 LINC01554Q52M75 96 aa6.86□□□□□ -1.31
LTA-215ENST00000471842 Q8N9P0 234 aaPredicted RBP6.86□□□□□ -1.31
LTA-215ENST00000471842 A0A1B0GW54 56 aa6.85□□□□□ -1.31
LTA-215ENST00000471842 SPANXA2-OT1Q8N9U9 137 aa6.85□□□□□ -1.31
LTA-215ENST00000471842 A6NED7 52 aa6.85□□□□□ -1.31
LTA-215ENST00000471842 PRR15LQ9BU68 103 aa6.84□□□□□ -1.31
LTA-215ENST00000471842 LORP23490 312 aaPredicted RBP6.83□□□□□ -1.32
LTA-215ENST00000471842 C20orf166-AS1Q96NR2 134 aa6.83□□□□□ -1.32
LTA-215ENST00000471842 MP68P56378 58 aa6.82□□□□□ -1.32
LTA-215ENST00000471842 DEFB116Q30KQ4 102 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms