RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 IGHV6-1A0A0B4J1U7 121 aa13.47□□□□□ -0.25
COL15A1-203ENST00000471477 LINC00313P59037 77 aa13.47□□□□□ -0.25
COL15A1-203ENST00000471477 Q75L30 129 aa13.47□□□□□ -0.25
COL15A1-203ENST00000471477 F8W1H4 67 aa13.46□□□□□ -0.26
COL15A1-203ENST00000471477 NREPQ16612 68 aa13.46□□□□□ -0.26
COL15A1-203ENST00000471477 NOTCH2NLQ7Z3S9 236 aa13.45□□□□□ -0.26
COL15A1-203ENST00000471477 A0A1B0GVX0 72 aa13.44□□□□□ -0.26
COL15A1-203ENST00000471477 C20orf166-AS1Q96NR2 134 aa13.42□□□□□ -0.26
COL15A1-203ENST00000471477 A8MUU9 505 aa13.39□□□□□ -0.27
COL15A1-203ENST00000471477 A0A1B0GV90 55 aa13.39□□□□□ -0.27
COL15A1-203ENST00000471477 KRTAP16-1A8MUX0 517 aa13.39□□□□□ -0.27
COL15A1-203ENST00000471477 C8orf87E5RJ46 101 aa13.38□□□□□ -0.27
COL15A1-203ENST00000471477 A8MWP4 228 aa13.37□□□□□ -0.27
COL15A1-203ENST00000471477 NDUFB1O75438 58 aa13.37□□□□□ -0.27
COL15A1-203ENST00000471477 ETDBQ3ZM63 59 aa13.37□□□□□ -0.27
COL15A1-203ENST00000471477 ATP11AUNQ6ZP68 121 aa13.35□□□□□ -0.27
COL15A1-203ENST00000471477 IGKV3D-7A0A0C4DH55 119 aa13.32□□□□□ -0.28
COL15A1-203ENST00000471477 Q6ZVQ6 151 aa13.3□□□□□ -0.28
COL15A1-203ENST00000471477 PRR15Q8IV56 129 aa13.27□□□□□ -0.29
COL15A1-203ENST00000471477 LINC00846Q9NV44 126 aa13.27□□□□□ -0.29
COL15A1-203ENST00000471477 FAT4Q6V0I7 4981 aa13.26□□□□□ -0.29
COL15A1-203ENST00000471477 BPY2O14599 106 aa13.26□□□□□ -0.29
COL15A1-203ENST00000471477 C8orf17Q9NRJ1 99 aa13.26□□□□□ -0.29
COL15A1-203ENST00000471477 K7EQZ3 153 aa13.22□□□□□ -0.29
COL15A1-203ENST00000471477 UBL5Q9BZL1 73 aa13.22□□□□□ -0.29
COL15A1-203ENST00000471477 MMP24-AS1A0A0U1RRL7 71 aa13.15□□□□□ -0.3
COL15A1-203ENST00000471477 LCE2AQ5TA79 106 aaPredicted RBP13.15□□□□□ -0.3
COL15A1-203ENST00000471477 Q8N9L7 120 aa13.13□□□□□ -0.31
COL15A1-203ENST00000471477 Q8N9P0 234 aaPredicted RBP13.13□□□□□ -0.31
COL15A1-203ENST00000471477 KRTAP19-2Q3LHN2 52 aa13.1□□□□□ -0.31
COL15A1-203ENST00000471477 TMEM254Q8TBM7 123 aa13.08□□□□□ -0.32
COL15A1-203ENST00000471477 hDV103S1A0JD37 113 aa13.07□□□□□ -0.32
COL15A1-203ENST00000471477 MRPL34Q9BQ48 92 aaKnown RBP13.06□□□□□ -0.32
COL15A1-203ENST00000471477 LCE2CQ5TA81 110 aa13.05□□□□□ -0.32
COL15A1-203ENST00000471477 ZCCHC13Q8WW36 166 aaKnown RBP13.05□□□□□ -0.32
COL15A1-203ENST00000471477 ACYP1P07311 99 aa13□□□□□ -0.33
COL15A1-203ENST00000471477 WFDC13Q8IUB5 93 aa13□□□□□ -0.33
COL15A1-203ENST00000471477 FAM240AA0A1B0GVK7 77 aa12.98□□□□□ -0.33
COL15A1-203ENST00000471477 CXCL6P80162 114 aa12.96□□□□□ -0.33
COL15A1-203ENST00000471477 CASC2Q6XLA1 102 aa12.96□□□□□ -0.33
COL15A1-203ENST00000471477 NDUFS5O43920 106 aa12.95□□□□□ -0.34
COL15A1-203ENST00000471477 COX6B2Q6YFQ2 88 aa12.94□□□□□ -0.34
COL15A1-203ENST00000471477 HCG22E2RYF7 251 aa12.9□□□□□ -0.34
COL15A1-203ENST00000471477 MT1HP80294 61 aa12.86□□□□□ -0.35
COL15A1-203ENST00000471477 HRES1P13985 223 aa12.84□□□□□ -0.35
COL15A1-203ENST00000471477 SPINK7P58062 85 aa12.83□□□□□ -0.36
COL15A1-203ENST00000471477 ATP5EP2Q5VTU8 51 aa12.8□□□□□ -0.36
COL15A1-203ENST00000471477 FLGP20930 4061 aaPredicted RBP12.79□□□□□ -0.36
COL15A1-203ENST00000471477 J3QR89 54 aa12.77□□□□□ -0.37
COL15A1-203ENST00000471477 Q5W150 140 aa12.77□□□□□ -0.37
COL15A1-203ENST00000471477 MPLKIPQ8TAP9 179 aa12.77□□□□□ -0.37
COL15A1-203ENST00000471477 RBM12B-AS1Q9P1G2 102 aa12.74□□□□□ -0.37
COL15A1-203ENST00000471477 LINC00643Q86TS7 51 aa12.73□□□□□ -0.37
COL15A1-203ENST00000471477 FAM236DA0A1B0GTK5 79 aa12.71□□□□□ -0.37
COL15A1-203ENST00000471477 FAM236CP0DP71 79 aa12.71□□□□□ -0.37
COL15A1-203ENST00000471477 HIST1H4AP62805 103 aaKnown RBP12.69□□□□□ -0.38
COL15A1-203ENST00000471477 M0R2T5 61 aa12.66□□□□□ -0.38
COL15A1-203ENST00000471477 IGKV2D-30A0A075B6S6 120 aa12.64□□□□□ -0.39
COL15A1-203ENST00000471477 IGKV2-30P06310 120 aa12.64□□□□□ -0.39
COL15A1-203ENST00000471477 K7ERU9 68 aa12.63□□□□□ -0.39
COL15A1-203ENST00000471477 C7orf65Q6ZTY9 151 aa12.62□□□□□ -0.39
COL15A1-203ENST00000471477 TP53AIP1Q9HCN2 124 aa12.62□□□□□ -0.39
COL15A1-203ENST00000471477 A0A087WVE0 104 aa12.57□□□□□ -0.4
COL15A1-203ENST00000471477 KRTAP9-2Q9BYQ4 174 aa12.54□□□□□ -0.4
COL15A1-203ENST00000471477 KRTAP10-6P60371 365 aaPredicted RBP12.54□□□□□ -0.4
COL15A1-203ENST00000471477 LORP23490 312 aaPredicted RBP12.5□□□□□ -0.41
COL15A1-203ENST00000471477 TRAV22A0A0B4J277 110 aa12.42□□□□□ -0.42
COL15A1-203ENST00000471477 UQCRQO14949 82 aa12.38□□□□□ -0.43
COL15A1-203ENST00000471477 LCE2DQ5TA82 110 aaPredicted RBP12.38□□□□□ -0.43
COL15A1-203ENST00000471477 C4orf26Q17RF5 130 aa12.37□□□□□ -0.43
COL15A1-203ENST00000471477 H1FX-AS1Q4G0G2 97 aa12.32□□□□□ -0.44
COL15A1-203ENST00000471477 H0Y9P7 68 aa12.3□□□□□ -0.44
COL15A1-203ENST00000471477 CYP4F30PQ9H0H9 118 aa12.29□□□□□ -0.44
COL15A1-203ENST00000471477 LOC101927531A0A1B0GV80 90 aa12.28□□□□□ -0.44
COL15A1-203ENST00000471477 MT-ATP8P03928 68 aa12.28□□□□□ -0.44
COL15A1-203ENST00000471477 OCR1Q9BZK8 76 aa12.28□□□□□ -0.44
COL15A1-203ENST00000471477 ATOX1O00244 68 aa12.26□□□□□ -0.45
COL15A1-203ENST00000471477 IMUPQ9GZP8 106 aa12.24□□□□□ -0.45
COL15A1-203ENST00000471477 KRTAP9-8Q9BYQ0 159 aa12.23□□□□□ -0.45
COL15A1-203ENST00000471477 C1orf64Q8NEQ6 169 aa12.2□□□□□ -0.46
COL15A1-203ENST00000471477 KRTAP3-1Q9BYR8 98 aa12.2□□□□□ -0.46
COL15A1-203ENST00000471477 SCGB1A1P11684 91 aa12.19□□□□□ -0.46
COL15A1-203ENST00000471477 LINC00208Q96KT6 92 aa12.14□□□□□ -0.47
COL15A1-203ENST00000471477 MP68P56378 58 aa12.13□□□□□ -0.47
COL15A1-203ENST00000471477 MT2AP02795 61 aa12.11□□□□□ -0.47
COL15A1-203ENST00000471477 C5orf47Q569G3 176 aa12.11□□□□□ -0.47
COL15A1-203ENST00000471477 FAM236AA0A1B0GUQ0 79 aa12.07□□□□□ -0.48
COL15A1-203ENST00000471477 FAM236BA0A1B0GV22 79 aa12.07□□□□□ -0.48
COL15A1-203ENST00000471477 KRTAP9-6A0A140TA67 174 aa12.03□□□□□ -0.48
COL15A1-203ENST00000471477 MT1FP04733 61 aa12.03□□□□□ -0.48
COL15A1-203ENST00000471477 KLKP1Q107X0 134 aa12.03□□□□□ -0.48
COL15A1-203ENST00000471477 S4R3F8 94 aa12.03□□□□□ -0.48
COL15A1-203ENST00000471477 H3BPC8 53 aa12.01□□□□□ -0.49
COL15A1-203ENST00000471477 KRTAP10-10P60014 251 aa11.97□□□□□ -0.49
COL15A1-203ENST00000471477 LCA10Q71F78 164 aa11.95□□□□□ -0.5
COL15A1-203ENST00000471477 SMIM20Q8N5G0 67 aa11.94□□□□□ -0.5
COL15A1-203ENST00000471477 TRAV7A0A075B6U4 112 aa11.93□□□□□ -0.5
COL15A1-203ENST00000471477 CRCT1Q9UGL9 99 aa11.92□□□□□ -0.5
COL15A1-203ENST00000471477 FSIP2Q5CZC0 6907 aa11.9□□□□□ -0.5
COL15A1-203ENST00000471477 CSAG1Q6PB30 78 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms