RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 ATXN8Q156A1 80 aa2.61□□□□□ -1.99
CCDC39-202ENST00000471307 LINC00575Q6W349 94 aa2.61□□□□□ -1.99
CCDC39-202ENST00000471307 Q6ZRX8 168 aa2.61□□□□□ -1.99
CCDC39-202ENST00000471307 NAA38Q9BRA0 125 aaKnown RBP2.61□□□□□ -1.99
CCDC39-202ENST00000471307 PSORS1C2Q9UIG4 136 aa2.61□□□□□ -1.99
CCDC39-202ENST00000471307 LRP1BQ9NZR2 4599 aa2.6□□□□□ -1.99
CCDC39-202ENST00000471307 DYNC1H1Q14204 4646 aaKnown RBP2.6□□□□□ -1.99
CCDC39-202ENST00000471307 hADV29S1A0JD25 119 aa2.6□□□□□ -1.99
CCDC39-202ENST00000471307 A8MUN3 132 aa2.6□□□□□ -1.99
CCDC39-202ENST00000471307 TCL1BO95988 128 aa2.6□□□□□ -1.99
CCDC39-202ENST00000471307 TRACP01848 142 aa2.6□□□□□ -1.99
CCDC39-202ENST00000471307 C1orf137Q5JT78 98 aa2.6□□□□□ -1.99
CCDC39-202ENST00000471307 GTF2H5Q6ZYL4 71 aa2.6□□□□□ -1.99
CCDC39-202ENST00000471307 CLEC2BQ92478 149 aa2.6□□□□□ -1.99
CCDC39-202ENST00000471307 SPCS1Q9Y6A9 102 aa2.6□□□□□ -1.99
CCDC39-202ENST00000471307 SRRM2Q9UQ35 2752 aaKnown RBP2.6□□□□□ -1.99
CCDC39-202ENST00000471307 A8MUU9 505 aa2.59□□□□□ -1.99
CCDC39-202ENST00000471307 K7EP34 96 aa2.59□□□□□ -1.99
CCDC39-202ENST00000471307 DNAL4O96015 105 aa2.59□□□□□ -1.99
CCDC39-202ENST00000471307 HIST1H4AP62805 103 aaKnown RBP2.59□□□□□ -1.99
CCDC39-202ENST00000471307 OCIAD2Q56VL3 154 aa2.59□□□□□ -1.99
CCDC39-202ENST00000471307 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.59□□□□□ -1.99
CCDC39-202ENST00000471307 SMIM20Q8N5G0 67 aa2.59□□□□□ -1.99
CCDC39-202ENST00000471307 A0A1B0GV90 55 aa2.58□□□□□ -2
CCDC39-202ENST00000471307 H3BMG7 143 aa2.58□□□□□ -2
CCDC39-202ENST00000471307 SMR3BP02814 79 aaPredicted RBP2.58□□□□□ -2
CCDC39-202ENST00000471307 RPL37AP61513 92 aaKnown RBP2.58□□□□□ -2
CCDC39-202ENST00000471307 HAMPP81172 84 aa2.58□□□□□ -2
CCDC39-202ENST00000471307 PRLHP81277 87 aa2.58□□□□□ -2
CCDC39-202ENST00000471307 SMCR5Q8TEV8 140 aa2.58□□□□□ -2
CCDC39-202ENST00000471307 PPDPFLQ8WWR9 84 aa2.58□□□□□ -2
CCDC39-202ENST00000471307 Q9BRP9 147 aa2.58□□□□□ -2
CCDC39-202ENST00000471307 HIGD2AQ9BW72 106 aa2.58□□□□□ -2
CCDC39-202ENST00000471307 VPS13BQ7Z7G8 4022 aa2.57□□□□□ -2
CCDC39-202ENST00000471307 C9JAW5 83 aa2.57□□□□□ -2
CCDC39-202ENST00000471307 F8W1H4 67 aa2.57□□□□□ -2
CCDC39-202ENST00000471307 TMEM256-PLSCR3K7ERE1 68 aa2.57□□□□□ -2
CCDC39-202ENST00000471307 BAALC-AS2P0C853 105 aa2.57□□□□□ -2
CCDC39-202ENST00000471307 KRTAP12-4P60329 112 aa2.57□□□□□ -2
CCDC39-202ENST00000471307 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
CCDC39-202ENST00000471307 Q6Q795 121 aa2.57□□□□□ -2
CCDC39-202ENST00000471307 Q6ZQY7 126 aa2.57□□□□□ -2
CCDC39-202ENST00000471307 ADM2Q7Z4H4 148 aa2.57□□□□□ -2
CCDC39-202ENST00000471307 LINC01600Q96MT4 127 aa2.57□□□□□ -2
CCDC39-202ENST00000471307 IMUPQ9GZP8 106 aa2.57□□□□□ -2
CCDC39-202ENST00000471307 ORMDL1Q9P0S3 153 aa2.57□□□□□ -2
CCDC39-202ENST00000471307 APOBP04114 4563 aaKnown RBP2.57□□□□□ -2
CCDC39-202ENST00000471307 IGLV5-48A0A075B6I7 105 aa2.56□□□□□ -2
CCDC39-202ENST00000471307 TEX49A0A1B0GTD5 131 aa2.56□□□□□ -2
CCDC39-202ENST00000471307 H3BT86 120 aa2.56□□□□□ -2
CCDC39-202ENST00000471307 ERC2-IT1O76042 136 aa2.56□□□□□ -2
CCDC39-202ENST00000471307 SPINK6Q6UWN8 80 aa2.56□□□□□ -2
CCDC39-202ENST00000471307 SPRR1BP22528 89 aa2.55□□□□□ -2
CCDC39-202ENST00000471307 EPPK1P58107 5090 aaKnown RBP2.55□□□□□ -2
CCDC39-202ENST00000471307 KRTAP10-4P60372 401 aaPredicted RBP2.55□□□□□ -2
CCDC39-202ENST00000471307 DEFB105AQ8NG35 78 aa2.55□□□□□ -2
CCDC39-202ENST00000471307 SPRR4Q96PI1 79 aa2.55□□□□□ -2
CCDC39-202ENST00000471307 SS18L2Q9UHA2 77 aa2.55□□□□□ -2
CCDC39-202ENST00000471307 LAMTOR3Q9UHA4 124 aa2.55□□□□□ -2
CCDC39-202ENST00000471307 JMJD7-PLA2G4BH0Y9G9 81 aa2.54□□□□□ -2
CCDC39-202ENST00000471307 H3BPC8 53 aa2.54□□□□□ -2
CCDC39-202ENST00000471307 Q5VSD8 79 aa2.54□□□□□ -2
CCDC39-202ENST00000471307 HSPG2P98160 4391 aa2.54□□□□□ -2
CCDC39-202ENST00000471307 RYR1P21817 5038 aa2.54□□□□□ -2
CCDC39-202ENST00000471307 FAM229BQ4G0N7 80 aa2.53□□□□□ -2
CCDC39-202ENST00000471307 C1orf64Q8NEQ6 169 aa2.53□□□□□ -2
CCDC39-202ENST00000471307 OBSCN-AS1Q96MR7 158 aa2.53□□□□□ -2
CCDC39-202ENST00000471307 KIAA1109Q2LD37 5005 aa2.53□□□□□ -2
CCDC39-202ENST00000471307 FAT1Q14517 4588 aa2.52□□□□□ -2.01
CCDC39-202ENST00000471307 A0A1B0GU33 70 aa2.52□□□□□ -2.01
CCDC39-202ENST00000471307 F8WEM9 126 aa2.52□□□□□ -2.01
CCDC39-202ENST00000471307 CRYGAP11844 174 aa2.52□□□□□ -2.01
CCDC39-202ENST00000471307 PDE6GP18545 87 aa2.52□□□□□ -2.01
CCDC39-202ENST00000471307 RBM3P98179 157 aaKnown RBP2.52□□□□□ -2.01
CCDC39-202ENST00000471307 ETDBQ3ZM63 59 aa2.52□□□□□ -2.01
CCDC39-202ENST00000471307 Q6JHZ5 121 aa2.52□□□□□ -2.01
CCDC39-202ENST00000471307 SSBP3-AS1Q7Z2R9 100 aa2.52□□□□□ -2.01
CCDC39-202ENST00000471307 TEN1Q86WV5 123 aa2.52□□□□□ -2.01
CCDC39-202ENST00000471307 SCGB1A1P11684 91 aa2.51□□□□□ -2.01
CCDC39-202ENST00000471307 LINC00304Q8N9R0 145 aa2.51□□□□□ -2.01
CCDC39-202ENST00000471307 DSCR8Q96T75 97 aa2.51□□□□□ -2.01
CCDC39-202ENST00000471307 PKHD1L1Q86WI1 4243 aa2.5□□□□□ -2.01
CCDC39-202ENST00000471307 LOC110117498A0A087WWA1 95 aa2.5□□□□□ -2.01
CCDC39-202ENST00000471307 TRBV7-4A0A0J9YYF1 115 aa2.5□□□□□ -2.01
CCDC39-202ENST00000471307 CCKP06307 115 aa2.49□□□□□ -2.01
CCDC39-202ENST00000471307 KRTAP12-3P60328 96 aa2.49□□□□□ -2.01
CCDC39-202ENST00000471307 KRTAP25-1Q3LHN0 102 aa2.49□□□□□ -2.01
CCDC39-202ENST00000471307 C9orf153Q5TBE3 101 aa2.49□□□□□ -2.01
CCDC39-202ENST00000471307 Q6ZQT0 140 aa2.49□□□□□ -2.01
CCDC39-202ENST00000471307 C14orf132Q9NPU4 83 aa2.49□□□□□ -2.01
CCDC39-202ENST00000471307 BIRC6Q9NR09 4857 aa2.49□□□□□ -2.01
CCDC39-202ENST00000471307 FLG2Q5D862 2391 aaPredicted RBP2.48□□□□□ -2.01
CCDC39-202ENST00000471307 J3QR89 54 aa2.48□□□□□ -2.01
CCDC39-202ENST00000471307 LCA10Q71F78 164 aa2.48□□□□□ -2.01
CCDC39-202ENST00000471307 A0A1W2PNM2 257 aa2.47□□□□□ -2.01
CCDC39-202ENST00000471307 ACYP1P07311 99 aa2.47□□□□□ -2.01
CCDC39-202ENST00000471307 SPAG11AQ6PDA7 123 aa2.47□□□□□ -2.01
CCDC39-202ENST00000471307 R4GN34 69 aa2.47□□□□□ -2.01
CCDC39-202ENST00000471307 A0A0G2JQZ4 141 aa2.46□□□□□ -2.02
CCDC39-202ENST00000471307 K7ERU9 68 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms