RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 LINC01546A6NGU7 62 aa2.46□□□□□ -2.02
CKS1B-204ENST00000471245 K7EMI3 77 aa2.46□□□□□ -2.02
CKS1B-204ENST00000471245 SPRR1AP35321 89 aa2.46□□□□□ -2.02
CKS1B-204ENST00000471245 RPS29P62273 56 aaKnown RBP2.46□□□□□ -2.02
CKS1B-204ENST00000471245 NXT2Q9NPJ8 142 aaKnown RBP2.46□□□□□ -2.02
CKS1B-204ENST00000471245 J3KT08 172 aa2.45□□□□□ -2.02
CKS1B-204ENST00000471245 IGLC3P0DOY3 106 aa2.45□□□□□ -2.02
CKS1B-204ENST00000471245 TMEM258P61165 79 aa2.45□□□□□ -2.02
CKS1B-204ENST00000471245 PEA15Q15121 130 aa2.45□□□□□ -2.02
CKS1B-204ENST00000471245 HRCT1Q6UXD1 115 aa2.45□□□□□ -2.02
CKS1B-204ENST00000471245 A0A0G2JQZ4 141 aa2.44□□□□□ -2.02
CKS1B-204ENST00000471245 HINT1P49773 126 aaPredicted RBP2.44□□□□□ -2.02
CKS1B-204ENST00000471245 COX17Q14061 63 aa2.44□□□□□ -2.02
CKS1B-204ENST00000471245 KCNQ1DNQ9H478 68 aa2.44□□□□□ -2.02
CKS1B-204ENST00000471245 NEBP20929 6669 aa2.44□□□□□ -2.02
CKS1B-204ENST00000471245 TRBV7-6A0A0J9YX20 115 aa2.43□□□□□ -2.02
CKS1B-204ENST00000471245 TRBV10-3A0A0K0K1G6 114 aa2.43□□□□□ -2.02
CKS1B-204ENST00000471245 C9orf92A6NGG3 77 aa2.43□□□□□ -2.02
CKS1B-204ENST00000471245 NCR3O14931 201 aa2.43□□□□□ -2.02
CKS1B-204ENST00000471245 SOSTDC1Q6X4U4 206 aa2.43□□□□□ -2.02
CKS1B-204ENST00000471245 H3BRM9 83 aa2.42□□□□□ -2.02
CKS1B-204ENST00000471245 SMIM13P0DJ93 91 aa2.42□□□□□ -2.02
CKS1B-204ENST00000471245 S100A1P23297 94 aa2.42□□□□□ -2.02
CKS1B-204ENST00000471245 SSBP3-AS1Q7Z2R9 100 aa2.42□□□□□ -2.02
CKS1B-204ENST00000471245 ETDCA0A1B0GVM5 59 aa2.41□□□□□ -2.02
CKS1B-204ENST00000471245 HIST1H2BKO60814 126 aa2.41□□□□□ -2.02
CKS1B-204ENST00000471245 MT-ND4LP03901 98 aa2.41□□□□□ -2.02
CKS1B-204ENST00000471245 HIST1H2BJP06899 126 aa2.41□□□□□ -2.02
CKS1B-204ENST00000471245 LINC00158P58513 81 aa2.41□□□□□ -2.02
CKS1B-204ENST00000471245 PMCHL1Q16048 86 aa2.41□□□□□ -2.02
CKS1B-204ENST00000471245 MT2AP02795 61 aa2.4□□□□□ -2.03
CKS1B-204ENST00000471245 BAALC-AS2P0C853 105 aa2.4□□□□□ -2.03
CKS1B-204ENST00000471245 NDUFA6P56556 154 aa2.4□□□□□ -2.03
CKS1B-204ENST00000471245 Q6ZRX8 168 aa2.4□□□□□ -2.03
CKS1B-204ENST00000471245 LINC01549A6NIU2 74 aa2.39□□□□□ -2.03
CKS1B-204ENST00000471245 J3QQQ9 107 aa2.39□□□□□ -2.03
CKS1B-204ENST00000471245 TIMM17BO60830 172 aa2.39□□□□□ -2.03
CKS1B-204ENST00000471245 RPL37P61927 97 aaKnown RBP2.39□□□□□ -2.03
CKS1B-204ENST00000471245 KRTAP19-6Q3LI70 58 aa2.39□□□□□ -2.03
CKS1B-204ENST00000471245 TMEM170BQ5T4T1 132 aa2.39□□□□□ -2.03
CKS1B-204ENST00000471245 Q5XG85 94 aa2.39□□□□□ -2.03
CKS1B-204ENST00000471245 BAGE3Q86Y29 109 aa2.39□□□□□ -2.03
CKS1B-204ENST00000471245 C18orf32Q8TCD1 76 aa2.39□□□□□ -2.03
CKS1B-204ENST00000471245 LOC107984156A0A0G2JMH3 177 aa2.38□□□□□ -2.03
CKS1B-204ENST00000471245 HBDP02042 147 aa2.38□□□□□ -2.03
CKS1B-204ENST00000471245 MT1FP04733 61 aa2.38□□□□□ -2.03
CKS1B-204ENST00000471245 KRTAP20-1Q3LI63 56 aa2.38□□□□□ -2.03
CKS1B-204ENST00000471245 C9orf153Q5TBE3 101 aa2.38□□□□□ -2.03
CKS1B-204ENST00000471245 ARL17AQ8IVW1 177 aa2.38□□□□□ -2.03
CKS1B-204ENST00000471245 LINC00846Q9NV44 126 aa2.38□□□□□ -2.03
CKS1B-204ENST00000471245 ROMO1P60602 79 aa2.37□□□□□ -2.03
CKS1B-204ENST00000471245 SFTA2Q6UW10 78 aa2.37□□□□□ -2.03
CKS1B-204ENST00000471245 SMCO4Q9NRQ5 59 aa2.37□□□□□ -2.03
CKS1B-204ENST00000471245 LINC00587B1AMM8 73 aa2.36□□□□□ -2.03
CKS1B-204ENST00000471245 C9JAW5 83 aa2.36□□□□□ -2.03
CKS1B-204ENST00000471245 K7ERJ3 54 aa2.36□□□□□ -2.03
CKS1B-204ENST00000471245 SPRR1BP22528 89 aa2.36□□□□□ -2.03
CKS1B-204ENST00000471245 MEIG1Q5JSS6 88 aa2.36□□□□□ -2.03
CKS1B-204ENST00000471245 LIMD2Q9BT23 127 aa2.36□□□□□ -2.03
CKS1B-204ENST00000471245 MUC12Q9UKN1 5478 aa2.35□□□□□ -2.03
CKS1B-204ENST00000471245 TRAV12-1A0A0B4J245 112 aa2.35□□□□□ -2.03
CKS1B-204ENST00000471245 TMEM218A2RU14 115 aa2.35□□□□□ -2.03
CKS1B-204ENST00000471245 FABP2P12104 132 aa2.35□□□□□ -2.03
CKS1B-204ENST00000471245 C14orf132Q9NPU4 83 aa2.35□□□□□ -2.03
CKS1B-204ENST00000471245 HSPB8Q9UJY1 196 aa2.35□□□□□ -2.03
CKS1B-204ENST00000471245 TRAV23DV6A0A075B6W5 121 aa2.34□□□□□ -2.03
CKS1B-204ENST00000471245 H3BMG7 143 aa2.34□□□□□ -2.03
CKS1B-204ENST00000471245 DPM2O94777 84 aa2.34□□□□□ -2.03
CKS1B-204ENST00000471245 Q1T7F1 81 aa2.34□□□□□ -2.03
CKS1B-204ENST00000471245 C7orf65Q6ZTY9 151 aa2.34□□□□□ -2.03
CKS1B-204ENST00000471245 IFI27L1Q96BM0 104 aa2.34□□□□□ -2.03
CKS1B-204ENST00000471245 SEC11CQ9BY50 192 aa2.34□□□□□ -2.03
CKS1B-204ENST00000471245 MYMXA0A1B0GTQ4 84 aa2.33□□□□□ -2.04
CKS1B-204ENST00000471245 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
CKS1B-204ENST00000471245 NPC2P61916 151 aa2.33□□□□□ -2.04
CKS1B-204ENST00000471245 CLLU1Q5K131 121 aa2.33□□□□□ -2.04
CKS1B-204ENST00000471245 C20orf202A1L168 122 aa2.32□□□□□ -2.04
CKS1B-204ENST00000471245 S100PP25815 95 aa2.32□□□□□ -2.04
CKS1B-204ENST00000471245 S100A7L2Q5SY68 101 aa2.32□□□□□ -2.04
CKS1B-204ENST00000471245 CHCHD1Q96BP2 118 aaKnown RBP2.32□□□□□ -2.04
CKS1B-204ENST00000471245 A0A087WSZ3 146 aa2.31□□□□□ -2.04
CKS1B-204ENST00000471245 A0A1B0GV90 55 aa2.31□□□□□ -2.04
CKS1B-204ENST00000471245 PMCHL2Q9BQD1 86 aa2.31□□□□□ -2.04
CKS1B-204ENST00000471245 ELOF1P60002 83 aaKnown RBP2.3□□□□□ -2.04
CKS1B-204ENST00000471245 DEFB105AQ8NG35 78 aa2.3□□□□□ -2.04
CKS1B-204ENST00000471245 PRO1933Q9H354 126 aa2.3□□□□□ -2.04
CKS1B-204ENST00000471245 IGLV5-48A0A075B6I7 105 aa2.29□□□□□ -2.04
CKS1B-204ENST00000471245 ATP11AUNQ6ZP68 121 aa2.29□□□□□ -2.04
CKS1B-204ENST00000471245 LINC00308Q8TCZ7 52 aa2.29□□□□□ -2.04
CKS1B-204ENST00000471245 TEX49A0A1B0GTD5 131 aa2.28□□□□□ -2.04
CKS1B-204ENST00000471245 COX7BP24311 80 aa2.28□□□□□ -2.04
CKS1B-204ENST00000471245 AKR1D1P51857 326 aa2.28□□□□□ -2.04
CKS1B-204ENST00000471245 BRK1Q8WUW1 75 aa2.28□□□□□ -2.04
CKS1B-204ENST00000471245 OBSCN-AS1Q96MR7 158 aa2.28□□□□□ -2.04
CKS1B-204ENST00000471245 TRBV20-1A0A075B6N2 111 aa2.26□□□□□ -2.05
CKS1B-204ENST00000471245 UQCRQO14949 82 aa2.26□□□□□ -2.05
CKS1B-204ENST00000471245 LEPROTL1O95214 131 aa2.26□□□□□ -2.05
CKS1B-204ENST00000471245 IGKCP01834 107 aa2.26□□□□□ -2.05
CKS1B-204ENST00000471245 FABP4P15090 132 aa2.26□□□□□ -2.05
CKS1B-204ENST00000471245 PLNP26678 52 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms