RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 HCG22E2RYF7 251 aa5.29□□□□□ -1.56
LMCD1-207ENST00000470776 IGFL1Q6UW32 110 aa5.29□□□□□ -1.56
LMCD1-207ENST00000470776 Q8N1X5 172 aa5.29□□□□□ -1.56
LMCD1-207ENST00000470776 VPS13BQ7Z7G8 4022 aa5.28□□□□□ -1.56
LMCD1-207ENST00000470776 H3BPC8 53 aa5.28□□□□□ -1.56
LMCD1-207ENST00000470776 ANAPC11Q9NYG5 84 aa5.28□□□□□ -1.56
LMCD1-207ENST00000470776 DSCR10P59022 87 aa5.27□□□□□ -1.57
LMCD1-207ENST00000470776 SSBP3-AS1Q7Z2R9 100 aa5.27□□□□□ -1.57
LMCD1-207ENST00000470776 Q8N9L7 120 aa5.27□□□□□ -1.57
LMCD1-207ENST00000470776 LORP23490 312 aaPredicted RBP5.26□□□□□ -1.57
LMCD1-207ENST00000470776 Q5VSD8 79 aa5.26□□□□□ -1.57
LMCD1-207ENST00000470776 MP68P56378 58 aa5.25□□□□□ -1.57
LMCD1-207ENST00000470776 KRTAP13-2Q52LG2 175 aa5.25□□□□□ -1.57
LMCD1-207ENST00000470776 A0A087X002 238 aa5.24□□□□□ -1.57
LMCD1-207ENST00000470776 IGLV9-49A0A0B4J1Y8 123 aa5.24□□□□□ -1.57
LMCD1-207ENST00000470776 K7EQZ3 153 aa5.24□□□□□ -1.57
LMCD1-207ENST00000470776 MOBPQ13875 183 aa5.24□□□□□ -1.57
LMCD1-207ENST00000470776 MYCBP2O75592 4640 aa5.24□□□□□ -1.57
LMCD1-207ENST00000470776 PKHD1L1Q86WI1 4243 aa5.23□□□□□ -1.57
LMCD1-207ENST00000470776 A0A087WSZ3 146 aa5.23□□□□□ -1.57
LMCD1-207ENST00000470776 OXTP01178 125 aa5.23□□□□□ -1.57
LMCD1-207ENST00000470776 CD164Q04900 197 aa5.23□□□□□ -1.57
LMCD1-207ENST00000470776 Q5XG85 94 aa5.23□□□□□ -1.57
LMCD1-207ENST00000470776 HMCN2Q8NDA2 5059 aa5.23□□□□□ -1.57
LMCD1-207ENST00000470776 A0A0G2JQZ4 141 aa5.22□□□□□ -1.57
LMCD1-207ENST00000470776 A8MWP4 228 aa5.22□□□□□ -1.57
LMCD1-207ENST00000470776 ZCCHC13Q8WW36 166 aaKnown RBP5.22□□□□□ -1.57
LMCD1-207ENST00000470776 hDV103S1A0JD37 113 aa5.21□□□□□ -1.58
LMCD1-207ENST00000470776 PRR15Q8IV56 129 aa5.21□□□□□ -1.58
LMCD1-207ENST00000470776 CYP4F30PQ9H0H9 118 aa5.2□□□□□ -1.58
LMCD1-207ENST00000470776 PRR26Q8N8Z3 221 aa5.19□□□□□ -1.58
LMCD1-207ENST00000470776 LINC00472Q9H8W2 130 aa5.19□□□□□ -1.58
LMCD1-207ENST00000470776 KRTAP29-1A8MX34 341 aaPredicted RBP5.18□□□□□ -1.58
LMCD1-207ENST00000470776 CASC2Q6XLA1 102 aa5.18□□□□□ -1.58
LMCD1-207ENST00000470776 SPANXA2-OT1Q8N9U9 137 aa5.18□□□□□ -1.58
LMCD1-207ENST00000470776 TYMSOSQ8TAI1 123 aa5.18□□□□□ -1.58
LMCD1-207ENST00000470776 TP53AIP1Q9HCN2 124 aa5.18□□□□□ -1.58
LMCD1-207ENST00000470776 C4orf26Q17RF5 130 aa5.17□□□□□ -1.58
LMCD1-207ENST00000470776 V9GYY9 64 aa5.17□□□□□ -1.58
LMCD1-207ENST00000470776 KRTAP10-8P60410 259 aa5.16□□□□□ -1.58
LMCD1-207ENST00000470776 ASB16-AS1Q495Z4 193 aa5.16□□□□□ -1.58
LMCD1-207ENST00000470776 SPAG11AQ6PDA7 123 aa5.16□□□□□ -1.58
LMCD1-207ENST00000470776 TRAV22A0A0B4J277 110 aa5.15□□□□□ -1.59
LMCD1-207ENST00000470776 RPS29P62273 56 aaKnown RBP5.15□□□□□ -1.59
LMCD1-207ENST00000470776 HRCT1Q6UXD1 115 aa5.15□□□□□ -1.59
LMCD1-207ENST00000470776 SPINK1P00995 79 aa5.14□□□□□ -1.59
LMCD1-207ENST00000470776 FP248Q71RG6 208 aaPredicted RBP5.14□□□□□ -1.59
LMCD1-207ENST00000470776 WFDC13Q8IUB5 93 aa5.14□□□□□ -1.59
LMCD1-207ENST00000470776 RNF213Q63HN8 5207 aa5.14□□□□□ -1.59
LMCD1-207ENST00000470776 H0Y9P7 68 aa5.13□□□□□ -1.59
LMCD1-207ENST00000470776 Q1T7F1 81 aa5.12□□□□□ -1.59
LMCD1-207ENST00000470776 LINC00304Q8N9R0 145 aa5.12□□□□□ -1.59
LMCD1-207ENST00000470776 Q96NJ1 140 aa5.12□□□□□ -1.59
LMCD1-207ENST00000470776 PRO0628Q9UI54 55 aa5.12□□□□□ -1.59
LMCD1-207ENST00000470776 LINC00208Q96KT6 92 aa5.11□□□□□ -1.59
LMCD1-207ENST00000470776 FAT3Q8TDW7 4589 aa5.11□□□□□ -1.59
LMCD1-207ENST00000470776 MMP24-AS1A0A0U1RRL7 71 aa5.1□□□□□ -1.59
LMCD1-207ENST00000470776 DEFB116Q30KQ4 102 aa5.1□□□□□ -1.59
LMCD1-207ENST00000470776 C1orf195Q5TG92 126 aa5.1□□□□□ -1.59
LMCD1-207ENST00000470776 C1orf64Q8NEQ6 169 aa5.1□□□□□ -1.59
LMCD1-207ENST00000470776 LIMD2Q9BT23 127 aa5.1□□□□□ -1.59
LMCD1-207ENST00000470776 MT1HL1P0DM35 61 aa5.09□□□□□ -1.59
LMCD1-207ENST00000470776 A0A1B0GVX0 72 aa5.08□□□□□ -1.6
LMCD1-207ENST00000470776 H3BS24 57 aa5.07□□□□□ -1.6
LMCD1-207ENST00000470776 C8orf17Q9NRJ1 99 aa5.07□□□□□ -1.6
LMCD1-207ENST00000470776 TNXBP22105 4242 aa5.06□□□□□ -1.6
LMCD1-207ENST00000470776 LRP1Q07954 4544 aaKnown RBP5.05□□□□□ -1.6
LMCD1-207ENST00000470776 IGLV7-46A0A075B6I9 117 aa5.05□□□□□ -1.6
LMCD1-207ENST00000470776 C8orf87E5RJ46 101 aa5.05□□□□□ -1.6
LMCD1-207ENST00000470776 MRPL34Q9BQ48 92 aaKnown RBP5.05□□□□□ -1.6
LMCD1-207ENST00000470776 FLG2Q5D862 2391 aaPredicted RBP5.05□□□□□ -1.6
LMCD1-207ENST00000470776 MPLKIPQ8TAP9 179 aa5.04□□□□□ -1.6
LMCD1-207ENST00000470776 LOC101927531A0A1B0GV80 90 aa5.01□□□□□ -1.61
LMCD1-207ENST00000470776 IGHV6-1A0A0B4J1U7 121 aa5□□□□□ -1.61
LMCD1-207ENST00000470776 BRK1Q8WUW1 75 aa5□□□□□ -1.61
LMCD1-207ENST00000470776 NDUFS5O43920 106 aa4.99□□□□□ -1.61
LMCD1-207ENST00000470776 PRR4Q16378 134 aa4.96□□□□□ -1.62
LMCD1-207ENST00000470776 NOTCH2NLQ7Z3S9 236 aa4.95□□□□□ -1.62
LMCD1-207ENST00000470776 COA5Q86WW8 74 aa4.95□□□□□ -1.62
LMCD1-207ENST00000470776 Q8N9P0 234 aaPredicted RBP4.95□□□□□ -1.62
LMCD1-207ENST00000470776 LRP2P98164 4655 aa4.94□□□□□ -1.62
LMCD1-207ENST00000470776 LINC00313P59037 77 aa4.93□□□□□ -1.62
LMCD1-207ENST00000470776 RETNLBQ9BQ08 111 aa4.93□□□□□ -1.62
LMCD1-207ENST00000470776 FAT4Q6V0I7 4981 aa4.92□□□□□ -1.62
LMCD1-207ENST00000470776 KRTAP16-1A8MUX0 517 aa4.92□□□□□ -1.62
LMCD1-207ENST00000470776 PCOTHQ58A44 107 aa4.91□□□□□ -1.62
LMCD1-207ENST00000470776 Q75L30 129 aa4.91□□□□□ -1.62
LMCD1-207ENST00000470776 PSPHP1O15172 72 aa4.9□□□□□ -1.63
LMCD1-207ENST00000470776 ACYP2P14621 99 aa4.9□□□□□ -1.63
LMCD1-207ENST00000470776 LINC01558Q9Y6Z2 57 aa4.9□□□□□ -1.63
LMCD1-207ENST00000470776 KRTAP13-3Q3SY46 172 aa4.89□□□□□ -1.63
LMCD1-207ENST00000470776 Q5VV11 94 aa4.89□□□□□ -1.63
LMCD1-207ENST00000470776 A8MUN3 132 aa4.88□□□□□ -1.63
LMCD1-207ENST00000470776 PRR15LQ9BU68 103 aa4.88□□□□□ -1.63
LMCD1-207ENST00000470776 CHKB-CPT1BH3BT56 60 aa4.87□□□□□ -1.63
LMCD1-207ENST00000470776 MUC2Q02817 5179 aa4.86□□□□□ -1.63
LMCD1-207ENST00000470776 C20orf166-AS1Q96NR2 134 aa4.86□□□□□ -1.63
LMCD1-207ENST00000470776 A8MUU9 505 aa4.85□□□□□ -1.63
LMCD1-207ENST00000470776 TPRXLQ17RH7 258 aa4.85□□□□□ -1.63
LMCD1-207ENST00000470776 C9orf92A6NGG3 77 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms