RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 ASB16-AS1Q495Z4 193 aa5.72□□□□□ -1.49
UBE3C-205ENST00000470408 LUZP6Q538Z0 58 aa5.72□□□□□ -1.49
UBE3C-205ENST00000470408 CELSR1Q9NYQ6 3014 aa5.71□□□□□ -1.49
UBE3C-205ENST00000470408 SPINK7P58062 85 aa5.71□□□□□ -1.5
UBE3C-205ENST00000470408 CSAG1Q6PB30 78 aa5.69□□□□□ -1.5
UBE3C-205ENST00000470408 DMAC1Q96GE9 116 aa5.68□□□□□ -1.5
UBE3C-205ENST00000470408 RPS29P62273 56 aaKnown RBP5.68□□□□□ -1.5
UBE3C-205ENST00000470408 KRTAP4-16G5E9R7 235 aaPredicted RBP5.68□□□□□ -1.5
UBE3C-205ENST00000470408 Q6ZRN7 208 aaPredicted RBP5.68□□□□□ -1.5
UBE3C-205ENST00000470408 ZANQ9Y493 2812 aa5.67□□□□□ -1.5
UBE3C-205ENST00000470408 Q5W150 140 aa5.64□□□□□ -1.51
UBE3C-205ENST00000470408 CAMK2N1Q7Z7J9 78 aa5.63□□□□□ -1.51
UBE3C-205ENST00000470408 HIVEP1P15822 2718 aa5.63□□□□□ -1.51
UBE3C-205ENST00000470408 VPS13CQ709C8 3753 aa5.61□□□□□ -1.51
UBE3C-205ENST00000470408 CSMD2Q7Z408 3487 aa5.61□□□□□ -1.51
UBE3C-205ENST00000470408 S4R3F8 94 aa5.61□□□□□ -1.51
UBE3C-205ENST00000470408 CELSR2Q9HCU4 2923 aa5.61□□□□□ -1.51
UBE3C-205ENST00000470408 PANO1I0J062 215 aa5.6□□□□□ -1.51
UBE3C-205ENST00000470408 ZFHX3Q15911 3703 aa5.59□□□□□ -1.51
UBE3C-205ENST00000470408 STAB2Q8WWQ8 2551 aa5.59□□□□□ -1.51
UBE3C-205ENST00000470408 KRTAP29-1A8MX34 341 aaPredicted RBP5.58□□□□□ -1.52
UBE3C-205ENST00000470408 A0A0A0MQY5 61 aa5.57□□□□□ -1.52
UBE3C-205ENST00000470408 FBN2P35556 2912 aa5.55□□□□□ -1.52
UBE3C-205ENST00000470408 CUBNO60494 3623 aa5.55□□□□□ -1.52
UBE3C-205ENST00000470408 ROMO1P60602 79 aa5.55□□□□□ -1.52
UBE3C-205ENST00000470408 NBEAL2Q6ZNJ1 2754 aa5.55□□□□□ -1.52
UBE3C-205ENST00000470408 A6NN06 94 aa5.54□□□□□ -1.52
UBE3C-205ENST00000470408 A0A087X002 238 aa5.53□□□□□ -1.52
UBE3C-205ENST00000470408 SPATA8Q6RVD6 105 aa5.52□□□□□ -1.53
UBE3C-205ENST00000470408 TENM4Q6N022 2769 aa5.52□□□□□ -1.53
UBE3C-205ENST00000470408 MXRA5Q9NR99 2828 aa5.52□□□□□ -1.53
UBE3C-205ENST00000470408 RPL37P61927 97 aaKnown RBP5.52□□□□□ -1.53
UBE3C-205ENST00000470408 H1FX-AS1Q4G0G2 97 aa5.51□□□□□ -1.53
UBE3C-205ENST00000470408 APCP25054 2843 aa5.51□□□□□ -1.53
UBE3C-205ENST00000470408 NF1P21359 2839 aa5.5□□□□□ -1.53
UBE3C-205ENST00000470408 NIPBLQ6KC79 2804 aaeCLIP5.5□□□□□ -1.53
UBE3C-205ENST00000470408 KRTAP13-1Q8IUC0 172 aa5.49□□□□□ -1.53
UBE3C-205ENST00000470408 DMBT1Q9UGM3 2413 aaPredicted RBP5.49□□□□□ -1.53
UBE3C-205ENST00000470408 PLAC4Q8WY50 150 aa5.48□□□□□ -1.53
UBE3C-205ENST00000470408 R4GN34 69 aa5.48□□□□□ -1.53
UBE3C-205ENST00000470408 FLG2Q5D862 2391 aaPredicted RBP5.48□□□□□ -1.53
UBE3C-205ENST00000470408 KRTAP7-1Q8IUC3 87 aa5.44□□□□□ -1.54
UBE3C-205ENST00000470408 KRTAP11-1Q8IUC1 163 aa5.43□□□□□ -1.54
UBE3C-205ENST00000470408 KRTAP13-2Q52LG2 175 aa5.41□□□□□ -1.54
UBE3C-205ENST00000470408 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
UBE3C-205ENST00000470408 NBPF19A0A087WUL8 3843 aa5.4□□□□□ -1.55
UBE3C-205ENST00000470408 KRTAP16-1A8MUX0 517 aa5.37□□□□□ -1.55
UBE3C-205ENST00000470408 M0QZ58 72 aa5.34□□□□□ -1.55
UBE3C-205ENST00000470408 NOTCH2NLQ7Z3S9 236 aa5.33□□□□□ -1.56
UBE3C-205ENST00000470408 ZNF469Q96JG9 3925 aaPredicted RBP5.32□□□□□ -1.56
UBE3C-205ENST00000470408 A8MUU9 505 aa5.3□□□□□ -1.56
UBE3C-205ENST00000470408 ADM2Q7Z4H4 148 aa5.29□□□□□ -1.56
UBE3C-205ENST00000470408 A8MU10 97 aa5.29□□□□□ -1.56
UBE3C-205ENST00000470408 C20orf166-AS1Q96NR2 134 aa5.28□□□□□ -1.56
UBE3C-205ENST00000470408 PDZD2O15018 2839 aa5.28□□□□□ -1.56
UBE3C-205ENST00000470408 KRTAP1-4P0C5Y4 121 aa5.24□□□□□ -1.57
UBE3C-205ENST00000470408 VWFP04275 2813 aa5.23□□□□□ -1.57
UBE3C-205ENST00000470408 TENM1Q9UKZ4 2725 aa5.22□□□□□ -1.57
UBE3C-205ENST00000470408 ANK3Q12955 4377 aaKnown RBP5.21□□□□□ -1.57
UBE3C-205ENST00000470408 AKAP9Q99996 3911 aa5.21□□□□□ -1.57
UBE3C-205ENST00000470408 TPRXLQ17RH7 258 aa5.21□□□□□ -1.58
UBE3C-205ENST00000470408 NDUFAF8A1L188 74 aa5.2□□□□□ -1.58
UBE3C-205ENST00000470408 OTOGQ6ZRI0 2925 aa5.19□□□□□ -1.58
UBE3C-205ENST00000470408 XP32Q5T750 250 aa5.15□□□□□ -1.59
UBE3C-205ENST00000470408 A0A1B0GVY2 172 aa5.13□□□□□ -1.59
UBE3C-205ENST00000470408 TRRAPQ9Y4A5 3859 aa5.13□□□□□ -1.59
UBE3C-205ENST00000470408 TENM3Q9P273 2699 aa5.11□□□□□ -1.59
UBE3C-205ENST00000470408 KRTAP10-8P60410 259 aa5.06□□□□□ -1.6
UBE3C-205ENST00000470408 FBN1P35555 2871 aaKnown RBP5.05□□□□□ -1.6
UBE3C-205ENST00000470408 TENM2Q9NT68 2774 aa5.05□□□□□ -1.6
UBE3C-205ENST00000470408 KRTAP13-3Q3SY46 172 aa5.05□□□□□ -1.6
UBE3C-205ENST00000470408 PKD1L1Q8TDX9 2849 aa5.03□□□□□ -1.6
UBE3C-205ENST00000470408 TNP1P09430 55 aa5□□□□□ -1.61
UBE3C-205ENST00000470408 PP632Q6XCG6 107 aa5□□□□□ -1.61
UBE3C-205ENST00000470408 H0YAA0 97 aa4.99□□□□□ -1.61
UBE3C-205ENST00000470408 PRO2289Q9P1D8 64 aa4.93□□□□□ -1.62
UBE3C-205ENST00000470408 P0C880 135 aa4.93□□□□□ -1.62
UBE3C-205ENST00000470408 C10orf95Q9H7T3 257 aa4.93□□□□□ -1.62
UBE3C-205ENST00000470408 KRTAP10-10P60014 251 aa4.88□□□□□ -1.63
UBE3C-205ENST00000470408 TGP01266 2768 aa4.83□□□□□ -1.64
UBE3C-205ENST00000470408 CSMD3Q7Z407 3707 aa4.78□□□□□ -1.64
UBE3C-205ENST00000470408 HUWE1Q7Z6Z7 4374 aaKnown RBP4.76□□□□□ -1.65
UBE3C-205ENST00000470408 ANK2Q01484 3957 aa4.76□□□□□ -1.65
UBE3C-205ENST00000470408 SRRM2Q9UQ35 2752 aaKnown RBP4.71□□□□□ -1.66
UBE3C-205ENST00000470408 CMYA5Q8N3K9 4069 aa4.69□□□□□ -1.66
UBE3C-205ENST00000470408 DNAH10Q8IVF4 4471 aa4.68□□□□□ -1.66
UBE3C-205ENST00000470408 COL7A1Q02388 2944 aa4.64□□□□□ -1.67
UBE3C-205ENST00000470408 LYSTQ99698 3801 aa4.64□□□□□ -1.67
UBE3C-205ENST00000470408 MT1HL1P0DM35 61 aa4.63□□□□□ -1.67
UBE3C-205ENST00000470408 KRTAP12-2P59991 146 aa4.62□□□□□ -1.67
UBE3C-205ENST00000470408 DNAH9Q9NYC9 4486 aa4.61□□□□□ -1.67
UBE3C-205ENST00000470408 DNAH3Q8TD57 4116 aa4.59□□□□□ -1.68
UBE3C-205ENST00000470408 PLECQ15149 4684 aaKnown RBP4.57□□□□□ -1.68
UBE3C-205ENST00000470408 KRTAP13-4Q3LI77 160 aa4.57□□□□□ -1.68
UBE3C-205ENST00000470408 FBN3Q75N90 2809 aa4.56□□□□□ -1.68
UBE3C-205ENST00000470408 KRTAP12-1P59990 96 aa4.56□□□□□ -1.68
UBE3C-205ENST00000470408 MEGF8Q7Z7M0 2845 aa4.54□□□□□ -1.68
UBE3C-205ENST00000470408 KRTAP10-4P60372 401 aaPredicted RBP4.54□□□□□ -1.68
UBE3C-205ENST00000470408 DNAH1Q9P2D7 4330 aa4.52□□□□□ -1.69
UBE3C-205ENST00000470408 DNAH7Q8WXX0 4024 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms